Oncorhynchus nerka (sockeye salmon): 115105274
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Entry
115105274 CDS
T07952
Name
(RefSeq) PDZ and LIM domain protein 4-like
KO
K23353
PDZ and LIM domain protein 1/2/3/4
Organism
one
Oncorhynchus nerka (sockeye salmon)
Pathway
one04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
one00001
]
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
115105274
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
one04990
]
115105274
Domain-containing proteins not elsewhere classified [BR:
one04990
]
LIM domain-containing proteins
PDZ-LIM family proteins
115105274
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Motif
Pfam:
DUF4749
PDZ
LIM
PDZ_6
SNAPC3
PDZ_2
Motif
Other DBs
NCBI-GeneID:
115105274
NCBI-ProteinID:
XP_029482951
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Position
LG22:33002205..33066435
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AA seq
376 aa
AA seq
DB search
MPYTVTLNGPSPWGFRLVGGRDFSTPLTISRVTPGSKAAQGDLCPGDTILVINGDNTETM
THMEAQNRIKACIGELTLAICRSGDKVWSPNVIEDGKTSPYMATLESESPQNFRPISTGA
MTSGYNSSYSRGNNSSGYSRKPSYTPELPHLNNGTSKQSNHAQYNNPASLYAHNNGSNGD
RDRVLPKQMSGLNLGSPHSPEPPMRSPMGRNGNGHSFEVTTESDVYKMLQDTEEPVSAPK
QSGSFKYLQGILEAEDGGVSPTDMSGVRGLRSPDRSPIPKLGSPIPGHMGPMPGLQKLPQ
CTRCGNGIVGTIVKARDKLYHTECFMCDDCGMNLKQRGYFFIEENLYCETHAMARVQPPE
GYDVVAVYPNSKVELV
NT seq
1131 nt
NT seq
+upstream
nt +downstream
nt
atgccctacaccgtgacattgaatggaccctcaccttggggttttcgactggtcggtgga
agggacttcagtacaccgttaactatttcgagggtgacaccgggcagtaaggcagcacag
ggggacctgtgtcctggagacaccatcctggttatcaatggggacaacacagagaccatg
acacacatggaggcccagaacaggatcaaggcctgcattggggagctcacactggccatc
tgcaggtcaggagacaaagtctggtctccaaatgttattgaagatggcaagacaagtcca
tacatggccacattggagtctgagtcaccacagaatttccgacccattagcactggagca
atgaccagtggttacaacagcagctacagcagggggaacaacagcagcggttacagccga
aaaccctcctacactcccgagctgccgcacctcaacaacggcacctccaagcagtccaac
catgcgcagtacaacaacccagccagcttgtacgcacacaacaacggcagcaacggagac
agagacagggtcttgccaaaacaaatgagcggcctgaatctagggtctcctcacagccct
gagcctccgatgcgttctcctatgggacgtaatggaaacggtcatagttttgaagtcacc
acagagtcagatgtgtacaagatgctgcaagacacagaggagccagtctccgcacccaaa
caatccggctccttcaaatacctacaaggcatattggaggcagaggatggaggtgtgtcc
cctactgacatgtctggagtgagaggccttaggtccccggaccgatccccaatccctaaa
ctgggcagccccatccccggccacatgggccccatgcccggcctacagaaactcccccag
tgcacgcgctgtggcaacggcatagtgggaaccatcgtgaaggccagagacaaactgtac
cacacagagtgcttcatgtgtgatgactgcggcatgaacctcaagcagaggggctacttc
ttcatcgaggagaacttgtactgtgagacccacgccatggcccgcgtacagcctcctgag
ggatatgacgtggtcgccgtctaccccaactccaaggttgaactggtctga
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