Oncorhynchus nerka (sockeye salmon): 115105276
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Entry
115105276 CDS
T07952
Name
(RefSeq) long-chain-fatty-acid--CoA ligase 6-like isoform X1
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
one
Oncorhynchus nerka (sockeye salmon)
Pathway
one00061
Fatty acid biosynthesis
one00071
Fatty acid degradation
one01100
Metabolic pathways
one01212
Fatty acid metabolism
one03320
PPAR signaling pathway
one04146
Peroxisome
one04216
Ferroptosis
one04920
Adipocytokine signaling pathway
Module
one_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
one00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
115105276
00071 Fatty acid degradation
115105276
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
115105276
09143 Cell growth and death
04216 Ferroptosis
115105276
09150 Organismal Systems
09152 Endocrine system
04920 Adipocytokine signaling pathway
115105276
03320 PPAR signaling pathway
115105276
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
one01004
]
115105276
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
one04147
]
115105276
Enzymes [BR:
one01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
115105276
Lipid biosynthesis proteins [BR:
one01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
115105276
Exosome [BR:
one04147
]
Exosomal proteins
Exosomal proteins of breast milk
115105276
Exosomal proteins of breast cancer cells
115105276
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C
Motif
Other DBs
NCBI-GeneID:
115105276
NCBI-ProteinID:
XP_029482953
LinkDB
All DBs
Position
LG22:33183238..33225055
Genome browser
AA seq
723 aa
AA seq
DB search
MLSFVLVSGSVWIILELSSTLMERMQAQELMSSLPLPELDELTQFFRSLPTSTLVGIGAL
TAVLAYWLATRPRAISPPCNLRHQSEEVLHEDGVRRSMLGDSPNKLLTHYHEDAKTMYEV
FQRGLHIAGDGPCLGSRLPNQPYKWLSYKEVTTRAEHLGSGLLSQGCTPSPDQFIGVFAQ
NRPEWIISELACYTYSMVVVPLYDTLGPDAIRYIINTADIITVICDKPEKAQVLLGNVER
QETPGLKRIILMDPFDPALLEQGEGCGVIVQSMQDVEALGREKHRNPMPPTPEDLSIVCF
TSGTTGNPKGVMLTHGNVVADFSGFLKVTDKVISPNQDDVLISFLPLAHMFERLIESVVY
CHGGRIGFFQGDIRLLSDDMKALRPTIFPVVPRLLNRMYDKIFSQANTPLKRWLLNFAAK
RKGAEVSSGIIRMDSLWDKIFFSKIQASLGGRLRMIVTGAAPASPTVLGFLRAALGCQVY
EAYGQTECTAGCTFTTPGDWTSGHVGAPLPCNLIKLVDVAEKNYFAAKGEGEVCVKGPNV
FKGYLKDPGRTAETLDTDGWLHTGDIGKWLPNGTLKIIDRKKHIFKLAQGEYISPEKIEN
IYIRCEPVTQLYVHGDSLQSCLVAIVVPDPETMPAWALKKGMEGSYRDLCKNTVLKKAIM
EDLQRLGKASGLHSFEQVKNIYVHNELFSIQNGLLTPTLKAKRPELREFFKEKIEDLYEN
ISM
NT seq
2172 nt
NT seq
+upstream
nt +downstream
nt
atgctttccttcgttctggtctctgggtctgtctggataatattagagctgagttccacc
ctgatggagaggatgcaggcccaggagctaatgagcagtctaccgctgcctgagctggat
gagttaacccagttcttccgctccctgcccacctccacgctggtgggaatcggtgctctg
actgctgtgctggcctactggctggccacacggccacgcgccatctctcctccctgcaac
ctccggcaccagtctgaggaagtgctgcatgaagatggggttcgcaggtccatgctgggg
gacagccccaataagctgctgacacactaccatgaggatgccaagaccatgtacgaggtg
ttccagagaggcctccacatagccggtgatggaccttgtttaggctcccggctacccaac
cagccttacaagtggctgtcctataaagaggtcacgacccgggcggagcacttggggtcg
gggctgctgagccagggctgcacgccaagcccagatcagttcatcggagtgtttgcacag
aacaggccagagtggatcatttcggagctggcctgctacacctactctatggtggtggtg
cctctgtatgacacactagggcctgatgccatacggtacatcattaacactgccgacatc
atcacagtgatctgcgacaagcctgagaaggcccaggtgctgctgggtaacgtggagagg
caggaaacccccgggctgaagaggatcatcctcatggacccctttgaccctgcactgctg
gagcagggggaaggctgcggggtcatcgtccagtccatgcaagacgttgaggcactgggc
agagagaagcatagaaatcccatgccacctacaccagaagacctgtccattgtgtgcttc
accagtggtaccacaggaaacccaaagggagtcatgctgacacacgggaatgtagtggct
gatttctcaggcttcctcaaagtcacagataaagtcatatccccaaaccaagacgatgtt
ctcatctccttcctgcctttggctcacatgtttgagagactcatcgagtctgtggtgtat
tgtcatggtggccggatcggctttttccaaggtgacatccgcctgctgtctgatgacatg
aaggccttacggcccaccatcttccctgtggtgcctcgattgctcaaccgcatgtacgac
aagatcttcagccaggccaacaccccattgaagcgctggctgctgaactttgcagccaag
agaaaaggggcagaggtcagcagtgggatcatccgcatggacagcctgtgggataagata
ttcttcagtaagatacaggccagcctgggtgggaggttacgtatgattgtaactggagct
gctccggcctcccccaccgtactgggatttctcagggcagcactgggttgtcaggtgtat
gaggcgtatggtcagacagagtgtactgctggttgtactttcaccactcctggagactgg
acctcaggtcatgtgggggcaccactgccatgtaacctcatcaagctggtggatgtggct
gaaaagaactactttgctgccaaaggagaaggagaggtgtgtgtgaaagggcccaatgtt
tttaagggctaccttaaagacccagggaggacggctgaaacgctagacacagacggttgg
ctccacaccggagacatagggaaatggttacctaacggtacactaaagatcattgaccgg
aagaagcacatctttaagctggcccagggagagtacatctcccctgagaagatagagaac
atttacatccgctgtgagcctgtgacccagctctacgtccatggtgacagtctacagtcc
tgtctggttgccatagttgttcctgacccagagacaatgcctgcttgggccctgaagaaa
ggcatggaggggagctatcgggacctctgtaaaaatactgtcctgaagaaagccatcatg
gaagacttgcagcgactgggcaaggcgagcggcctccactcgtttgagcaggtgaaaaac
atctacgtccataatgagctattctcgatacagaatggcctgttgactccgacactaaaa
gcaaagagacctgagctgagggagtttttcaaggagaagattgaagacctgtatgaaaac
atctccatgtga
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