Oncorhynchus nerka (sockeye salmon): 115105282
Help
Entry
115105282 CDS
T07952
Name
(RefSeq) lymphoid enhancer-binding factor 1-like isoform X1
KO
K02620
transcription factor 7
Organism
one
Oncorhynchus nerka (sockeye salmon)
Pathway
one04310
Wnt signaling pathway
one04520
Adherens junction
one04916
Melanogenesis
one05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
one00001
]
09130 Environmental Information Processing
09132 Signal transduction
04310 Wnt signaling pathway
115105282
09140 Cellular Processes
09144 Cellular community - eukaryotes
04520 Adherens junction
115105282
09150 Organismal Systems
09152 Endocrine system
04916 Melanogenesis
115105282
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
115105282
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
one03000
]
115105282
Transcription factors [BR:
one03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG TCF-1
115105282
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CTNNB1_binding
HMG_box
HMG_box_2
HMG_WDHD1
Motif
Other DBs
NCBI-GeneID:
115105282
NCBI-ProteinID:
XP_029482972
LinkDB
All DBs
Position
LG22:34080631..34147773
Genome browser
AA seq
511 aa
AA seq
DB search
MPQLSSGGGDDLGANDEMISFKDEGDQDEKIQENAFTERDLADLKSSLVNESETNQSPNA
AAVRRGQQNEHRGYQEKHREHLDGVSKHQDGGMYKTAYPGYPFLMLPDPYIPNGSMSPSS
NKVSVVQQSHGMHPLTSLLPYSNDHFNPSPPHLPTDMSQKGVHRPQSQDISGFYSLPQGG
VGQMPPSMGWQSQPVYPLSSCGFRQPYSSSLPNSSSYPRFSHSLMLGPGMHSTGIPHPAI
MPPSGKQDHHDHYDRNVYAKPHQEPKREKEPKKPVIKKPLNAFMLYMKEMRAKVIAECTL
KESAAINQILGRRWHALTREEQAKYYELARKERQLHMQLYPSWSARDNYEAGLREGAGEK
NKADWGKKKRRKREKQQDSTTDPGSPKKCRARFGLNQQTDWCGPCRRKKKCIRYLQGGWC
ASPTSSDGSAIDSPPSPVDGVPPQHPSLPSSPSPDSPSHIPLHPQPSKQHTPRILSKPKT
TELSLKALIESSQQHDNLNHHHHDCTLPKSH
NT seq
1536 nt
NT seq
+upstream
nt +downstream
nt
atgcctcagctcagcagcggcggaggagatgatctcggagcgaacgatgaaatgatatcc
tttaaggatgaaggcgatcaagatgagaaaattcaagaaaacgctttcacagaaagggac
ttagctgacctcaagtcgtctctggtgaatgaatccgagacgaatcaaagtccgaacgca
gcggcggtcagacggggacagcaaaacgaacacagaggttatcaagagaaacaccgggag
catctcgacggcgtttccaaacatcaagatggagggatgtacaaaacagcgtatccgggg
tacccgtttctcatgctgcctgacccatacatccccaacggatccatgtccccatcttcc
aacaaagtttcggtggtccagcagtctcacgggatgcaccccctgacgtccctgttgccg
tacagcaatgaccacttcaaccccagcccccctcacctgcccacagacatgagccagaaa
ggcgttcacaggccccagtcccaggacatctcaggcttctactccctacctcagggcggt
gtgggacagatgcccccctccatgggctggcaaagtcagcctgtctatcccctgtcctca
tgtggattcagacagccctactcctccagtctccccaacagctcttcctaccccaggttc
tctcactctctgatgctagggccaggcatgcactcaacagggatcccccatccagccatc
atgccaccttcaggcaaacaggaccatcatgaccattacgacaggaacgtgtacgctaag
ccacaccaggagcccaagcgggagaaggagcctaagaagccagtgatcaagaagcctctg
aatgctttcatgctgtacatgaaggagatgagggccaaggtgatcgctgagtgcacgctg
aaggagagcgctgccatcaaccagatactgggcagaaggtggcacgctctgacccgggag
gaacaggctaaatactatgagctggccaggaaggagcggcagctacacatgcagctctac
cccagctggtccgccagagacaactacgaggcgggccttagagagggcgcgggggaaaag
aataaagctgattggggcaagaagaagagaagaaaaagagagaagcagcaggactccacc
acagaccctggctctcctaagaaatgcagagctcgcttcggcctcaaccaacaaacggac
tggtgtggtccctgcaggaggaaaaagaagtgcattcgataccttcaaggaggatggtgc
gccagccccacttcttccgatggaagcgctatagactcgcccccctcccccgtcgacggc
gtcccccctcagcacccctccctgcccagctcgccctcgcctgattccccctcacacatc
cctctgcacccccagcccagcaaacaacacacaccccgtatcctctcaaaacccaagacc
acagaactctctctcaaagctttaatagaatcatcccaacagcacgacaatctcaatcat
catcatcatgactgtaccctgcccaagtctcactag
DBGET
integrated database retrieval system
