KEGG   Oncorhynchus nerka (sockeye salmon): 115105339
Entry
115105339         CDS       T07952                                 
Name
(RefSeq) cullin-5-like isoform X1
  KO
K10612  cullin 5
Organism
one  Oncorhynchus nerka (sockeye salmon)
Pathway
one04120  Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:one00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04120 Ubiquitin mediated proteolysis
    115105339
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:one04121]
    115105339
   03400 DNA repair and recombination proteins [BR:one03400]
    115105339
Ubiquitin system [BR:one04121]
 Ubiquitin ligases (E3)
  Multi subunit type E3
   Cul5 complex
    Cullin
     115105339
DNA repair and recombination proteins [BR:one03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    Other NER factors
     115105339
SSDB
Motif
Pfam: Cullin Cullin_Nedd8 HMD
Other DBs
NCBI-GeneID: 115105339
NCBI-ProteinID: XP_029483131
LinkDB
Position
LG22:39069595..39113679
AA seq 824 aa
MFVVLNMATSNLLKNKGSLQFENKWDLMRPIVLKLLRQESVTKQQWFDLFSDVHAVCLWD
DKGPAKIHQALKADILDFIKQAQVRVLSHQDDTALLKAYIVEWRKFFTQCDILPKPFCQL
EITLMGKQGSNKKSNVEDSIVRKLMLDTWNESIFSNIKNRLQDSAMKLVHAERLGEAFDS
QLVIGVRESYVNLCSNPDNKLQIYRDNFEKAYMDSTERFYRTQAPSYLQQNGVQNYMKYA
DAKLREEEKRALRYLETRRQCNSVQALMECCVNALVTSFKETILAECPGMIRRNETEKLH
LMFSLMDKVPSGIEPMLKDLEEHIMSAGLADMVASAETITSDSEKYVEQLLTLFNRFSKL
VKDAFQDDPRFLTARDKAYKAVVNDAAIFKLELPLKQKGVGLKTQPESKCPELLANYCDM
LLRKTPLSKKLASEEIEAKLKEVLLVLKYVQNKDVFMRYHKAHLTRRLILDISADSEIEE
NMVEWLREVGMPADYVNKLARMFQDIKVSEDLNQNFKECHKHNKVALSGKHVKKNQFAYL
PKGPRGLVIRPHQEDGGQNRGQSALLTDSVNIKILNAGAWSRSSEKVFVSLPTELEDLIP
EVEDFYKKNHSGRKLHWHHLMSNGIITFKNEVGQYDLEVTTFQLAVLFAWNQRPRERISF
ENLKLATELPDAELRRTLWSLVAFPKLKRQVLSYDPVVGSPKDFAEGTLFYVNQEFSLIK
NSKVQKRGKINLIGRLQLTTERMREEENEGIVQLRILRTQEAIIQIMKMRKRITNAQLQT
ELVEILKNMFLPQKKMIKEQMEWLIEHKYIKRDETDLNTFIYMA
NT seq 2475 nt   +upstreamnt  +downstreamnt
atgttcgtagtcctgaacatggcgacgtctaatttgctaaagaacaaaggctccctccag
ttcgaaaacaagtgggatttgatgcgtcccatcgttctgaagctgctccgtcaggagtca
gtcaccaagcagcagtggtttgacctcttctcagacgtccatgcagtatgcctatgggat
gacaagggaccggccaagatccaccaggccctgaaggcagacatcttagacttcatcaag
caagcacaagtgcgggtgttgagtcaccaggatgacacggcactgctgaaggcctacatt
gtggagtggcggaagtttttcacacagtgcgacatcctgcccaaacccttctgccagctg
gagatcacgctcatgggcaagcagggcagcaacaagaagtctaacgtagaggacagcatc
gtacggaagctcatgctggacacgtggaatgagtccatcttctccaacatcaagaacagg
ctgcaggacagcgccatgaagctggtgcacgccgagcgcctgggggaggccttcgactct
cagctggtcatcggcgtcagggagtcctacgtgaacctgtgctcaaacccagacaataag
ttgcagatctacagggacaactttgagaaggcttacatggactccactgagagattctac
agaacacaggccccctcctacctgcagcagaacggagtacagaactacatgaaatacgca
gacgccaagttgagagaggaggagaaacgggcgttgcgctatttggagacgagacgtcaa
tgtaactctgtacaagcactgatggagtgttgcgtgaacgccctggtgacgtccttcaag
gagaccatcttggccgagtgtccaggcatgatcaggcgaaacgagacagagaagctccat
ctcatgttctctctgatggacaaggtgcctagtggcatcgagcccatgctgaaggactta
gaggaacacatcatgtctgctgggctggccgacatggtggcctccgccgagaccatcacc
tctgactctgagaagtacgtggagcagctcctcaccctgttcaaccgcttcagtaagctg
gttaaagatgcctttcaggacgaccctcgcttcctcacagcccgagacaaggcttacaaa
gcagttgtgaatgacgctgctatttttaaattggaacttccgctgaagcagaaaggggtg
gggctgaagactcagccagagtccaagtgtccagagttgctggccaactactgtgatatg
ctgctgaggaaaaccccgctgagcaagaaacttgcatctgaggagatcgaggccaagctc
aaggaagtgctgctggtgttgaagtacgtgcagaacaaagacgtgttcatgcgctaccac
aaagcccatctcacccgacgccttatcctggacatctccgctgacagcgaaatcgaggag
aacatggtggagtggctccgggaggtaggcatgcctgctgactacgtgaataagctggct
cgaatgttccaggacatcaaggtatccgaggacctcaaccagaacttcaaagagtgtcac
aaacacaacaaggtggccctatcaggcaagcatgtgaagaaaaatcaatttgcatattta
ccgaagggccccaggggactggtgatcaggcctcaccaggaagacggaggtcagaacaga
ggtcagtcagccctattaacggactctgtcaacatcaagatcctgaatgcgggggcgtgg
tcgcggagctccgagaaggtgtttgtgtcactgcccaccgagctggaggacctgatcccc
gaggtggaggacttttacaagaagaaccacagtggcaggaaactgcactggcatcacctc
atgtccaatggcattatcacatttaagaatgaggtgggccagtacgacctggaggtgacc
acattccaactggctgtgctgtttgcctggaaccagaggcctcgggagaggatcagcttt
gaaaaccttaagctggccacggagctgcctgatgccgagctccgacgcaccctctggtcc
ctggtagcgttccccaagctaaagcggcaggtgttgtcctacgacccagtggtgggttcg
cccaaagactttgcagagggcaccctcttctatgtcaatcaggagttttcactaataaaa
aactccaaggtccaaaaaagggggaagattaacctaattggccggcttcagctcaccaca
gagcgaatgagggaggaggagaacgagggaatcgtccagctcaggatattgagaacacag
gaggccatcatccaaatcatgaagatgcgcaagcggatcacgaacgcccagctgcagaca
gagctggtcgagatcctcaaaaacatgttcctacctcaaaagaagatgatcaaggagcag
atggaatggctcattgagcacaagtacatcaagcgggacgagacggatctcaacaccttc
atctacatggcgtaa

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