Oncorhynchus nerka (sockeye salmon): 115105346
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Entry
115105346 CDS
T07952
Name
(RefSeq) remodeling and spacing factor 1-like isoform X1
KO
K11657
remodeling and spacing factor 1
Organism
one
Oncorhynchus nerka (sockeye salmon)
Pathway
one03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
one00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
115105346
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
one03036
]
115105346
Chromosome and associated proteins [BR:
one03036
]
Eukaryotic type
Chromatin remodeling factors
RSF complex
115105346
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
WHIM1
PHD
DDT
WSD
Motif
Other DBs
NCBI-GeneID:
115105346
NCBI-ProteinID:
XP_029483141
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All DBs
Position
LG22:complement(39334990..39379038)
Genome browser
AA seq
1982 aa
AA seq
DB search
MAASAPSAGFSDLCPSYAVICSFLERYGALLDLPELTFPQLERYLQDTSSVPKLLVDLHV
KLLRKIGKSVSADRWEKYIVKVCHEFNSTWAWELENKGYKDMSVECKTGILKHLCECQFD
DNVKFKTAINEEDPDKMRLHPIGKDKDGLMYWFQLDQDNNVRVYVEEQDDLDGSSWKCIV
RDRNSLAEILAQLKTQIDPALLTKKEGEEEDEIKKTGGEGEIKKTEDTSGDEEDKLSKDT
ASLVSPKTENTERKSPKEESKLDESDAKSPSNGLKDNQVESESTRQSEKPMVDDKATINT
QAVKEELMEVSESKESTATSATEPLAEKHCVTPQTEQTEEAKRKTAEELQRVMKNDQQAK
IPLKKREMKLSEDFDNSSGGGSRIIVRNPSVAPVKEAPKVEETSKEVSVALVGTMETKSD
QVNGDAQPVTEKSVNKGMRESPKEMGIQRESADSKQQQTKAVAREECEAAEASEKEKTNL
SLDMDKNEGQMASNAEEPMEVAMADETNLQKTVPAPKAEKESTEALKKSSLKEAKSSSPL
TKPLTSSKDATSTPEKSSDLKEEQKVKVSKWDVKVRRTEHKTSTSIETDKTPLSSKSQKP
DETKGTDSSIAFQEVNVSAFKETVVPKDSCPLSVVKEMEKPSIIKATETLLNPKNPETSV
ITKQTERPDPITDKPESSKRPESPAVIKNTENPSNKERAEKCDGSNDIKTSSVIKKTEIS
EKSKDAKNLASSKETNMSSLLKKTDKPVLNKEAEKLESTKETNKSLVIKMTVKPEASKHT
EKCDTPKDIMSALTKEKPAVSAVSTNTNVAPEVKKKNIPEKDSKKTAICKDETRAVAAVT
ETQSGPENVEMADIFEKSNQSQLEGPKRVEKLGIPKDPLKSTMPKYAEKSAKLATPKDAE
KLATPKDAEKLATPKDAEKLATPKDAEKLATPKDAEKLATPKDAEKLATPKDAEKLATPK
EAEKLATPKEAEKLATPKEAEKLATPKDAEKLPQSAMSENAGKSATPKDTEKLATPTDAE
NSAKSATPIPEDAEILDTPEEAEKSVNTKDTEKSATLKNTETASKKIEDFTICEGQKPDA
SKETEKLADIMPAAAKGEKHVAFEDSKQLPSLKESVPVGWKQEEPMEISLEKSTDDHVII
RGHAERGWTKKSVKSGENSESEPIKDSNRMDCNAPSEKQATSKKASSLTDAEGETDKSQV
KVIKEDATTQGCPKEDEKEDDQAKKNDQKEDDGAEKDNSTAAEKLGEAKASKGSENKEDE
KKDAGTTSEIQEEGIRLKIRGITHRRKAELQRTERDSGSDTGETGRSLRRSPRICRPTAK
GVEFQDRRLEKKETTPPEEEEDEEEETVQRKPREKLDQDGQSKSKGRRRRKTRWSNTRTR
RRKKNGSGDDNESESSEEESEEDDSDESFKVEKGKRRWRNRNRERHSDDSDTSSDDDLPP
NEDPCKHCGLPNHPELILLCDSCDSGYHTACLRPPLMIIPDGEWFCPPCQHKLLCDKLEE
QLANLDAALKKRDRAERRKERLVYVGISVENIITPSLEVEEEREEEKEEEVKKEKKEKKE
KSKSWGRRSTRAKKSISYRFDEFDEAIEEAIEEDIREADGGGAGRGKDMANITGHSRGKD
MSTILAAGEVGEGKENGRPPRPNAGQRRKKRRRLNDLDSDSTVEEEESEDEFRLSDSTEE
EEFVASDKSDAESEAAVDSNDDSDFGSTRRRTARTRRPAKCQRSTRPRRRRRARGYSDDE
EEETSDEDEDEIMSEGSSEFSDSDLDCSQRRSRRSHTKRQVNYCESSGDSDGSKAGTNRD
KVKPRRRLASSDSEASSSRGSDDDKRERTRLKRRADSSEEESQQRRRRLSLKRRRASEED
DDDSDESSEGERPVRKRVNRIDSDDSDKEEEKEETKEEEEGGVLGKGASPLDYNLVELHP
PTNGQSPIKALEGLAHIGPQKPGATAVTIAPNGLELAPQDDDEDDLLGVTDLVDFVCNSD
VL
NT seq
5949 nt
NT seq
+upstream
nt +downstream
nt
atggctgcctcggctccatcggcgggtttctccgatttgtgcccaagctacgccgtgata
tgctcttttctagagcgttatggagctttgctggatctaccagagctcacatttccgcag
ttggagagatatctccaagacacatcttcagttccaaagctcttggtggaccttcatgtg
aagttgctgaggaagattggcaagtcggtgtccgcagacagatgggagaagtacattgtg
aaggtgtgccatgagttcaacagtacctgggcatgggaacttgaaaataaaggatacaaa
gacatgtctgtggagtgtaagactggaatcctcaaacacttatgtgagtgccagtttgat
gacaatgtcaagttcaagactgcaattaatgaggaggatcctgataagatgcggctccat
cccattggcaaggacaaggatggcctaatgtactggttccagcttgaccaggataacaat
gtgagggtctatgtggaggagcaggacgacctggacgggtcctcctggaagtgcattgtc
agagacagaaacagcttggctgagatcctggcacagctgaagactcaaatcgacccagca
ctgttgacaaagaaagaaggagaggaggaagatgagatcaagaagactggcggagaaggg
gaaattaaaaagacagaggatacctcaggggatgaagaggacaaactctccaaggataca
gcttctttagtgtccccaaaaacagagaatacagaaagaaaatccccaaaagaggaatca
aagctggacgaatcagatgccaaatccccatcgaatggcctcaaagacaaccaagtcgag
tcagagtcaacaaggcaatccgagaagccaatggtggatgacaaggccaccattaacacc
caggccgtcaaagaagagctgatggaggtgtcagaatccaaggagagcacagccacaagt
gctacagagcctcttgcggagaaacattgtgtgacgccacagacagaacagactgaggaa
gccaagaggaagactgcagaggaactccaaagggtgatgaagaatgaccagcaggccaaa
atccccttgaaaaagagagagatgaaacttagtgaagattttgataatagtagtggcggt
ggcagtagaatcattgtgcgtaacccatctgttgctcctgtcaaagaagctcctaaagtt
gaggagacaagtaaagaggtctctgttgccctggtggggacgatggagactaaaagtgat
caagtgaatggtgatgctcagcctgtcacagaaaaaagtgtcaataagggaatgagagaa
tctcctaaagagatgggaatacagagagaatctgctgatagcaaacaacagcaaacaaaa
gctgttgctagggaagaatgtgaagcagcagaagctagtgaaaaagagaaaacaaatctg
tccctggacatggacaaaaacgaagggcagatggcaagcaatgctgaggagcccatggag
gtggccatggccgatgaaacgaacctacagaaaactgttccagccccaaaggcagagaag
gaaagcactgaagcactgaaaaaatcatccctaaaagaggctaaatcttcatcccctctg
acaaagccattgacttcatctaaggatgcaacaagcacaccggaaaagtcctctgatctt
aaagaggaacaaaaagtcaaggtatccaagtgggatgtgaaagtgcgtcgtacagaacac
aagacatccacatcaatagaaacagataaaacccctttatctagtaagtcacagaaacca
gatgaaactaaaggaacagattcatccattgcatttcaagaggtaaatgtgtctgccttt
aaggaaacagttgtccctaaagacagttgtcccctttctgtagtgaaagagatggaaaaa
ccatccatcataaaagccacagaaacgttgttgaaccctaaaaacccagaaacatcagtc
atcactaaacaaaccgagagacctgatcccattacagataaaccagaaagctcaaaacgc
cctgagtcaccagcagtcataaaaaatacagagaatccatctaacaaagagcgcgcagag
aaatgtgatggttctaacgatatcaaaacatcttctgtcattaaaaagacagagatttca
gaaaagagtaaagatgccaagaacctggccagctctaaagagaccaatatgtcctcatta
cttaaaaagacagacaaaccagttctcaataaagaagcagagaaactggagagcactaaa
gagactaataaatcgttggtcattaaaatgacagtgaaaccagaggcatctaaacataca
gagaaatgtgatacccctaaagacattatgtcagctctcaccaaggagaaacctgctgtc
agtgctgtaagcacaaatacaaatgttgcccctgaggtgaagaaaaaaaacatcccggag
aaagactctaagaaaacagccatctgtaaagatgagacgagagctgttgcagcagtgact
gagacacaatctggccctgaaaacgtggagatggcagacatctttgagaaatcaaaccaa
tcccaactggaaggacccaaacgggtagagaaattgggtatccctaaagacccgttgaaa
tcgacaatgcctaaatacgcagagaaatctgctaaactggctacgcctaaagacgcggag
aaattggctacccctaaagacgcggagaaattggctacgcctaaagacgctgagaaattg
gctacgcctaaagacgctgagaaattggctacgcctaaagacgctgagaaattggctacg
cctaaagacgctgagaaattggctacgcctaaagacgctgagaaattggctacgcctaaa
gaagcggagaaattggctacgcctaaagaagcggagaaattggctacgcctaaagaagcg
gagaaattggctacgcctaaagatgcggagaaattgcctcaatcggctatgtctgaaaat
gctgggaaatctgctacccctaaagacactgagaaattggctacccctacagacgctgag
aattcagctaaatcggctacacctatccctgaagacgcagagatattggatactcctgaa
gaagcggagaaatcggttaacactaaagacactgagaaatcggctacccttaaaaacaca
gagactgcttctaaaaagattgaagatttcacaatctgtgaaggacagaaaccagatgcc
tctaaagaaacggagaaactggcagacataatgccagctgcagcaaaaggagagaaacat
gtcgcctttgaggattctaagcaattaccttctctcaaagagtctgtcccagtggggtgg
aaacaggaagagcctatggaaataagtttggaaaagtcaacagatgaccatgtaattatt
aggggacatgccgaaagaggctggacaaagaagtctgttaaaagtggagagaattctgag
agcgagcctatcaaagactcaaaccgcatggactgtaatgcaccatcagaaaaacaggct
accagcaagaaggcatcatctctcactgatgctgaaggtgagacagacaaaagccaggtc
aaagtaatcaaggaagatgccacaacacagggatgccctaaagaggatgagaaggaagat
gatcaggctaagaaaaacgaccaaaaagaggatgatggtgctgagaaagataactcaact
gcagcagagaaactgggtgaggcaaaagcaagtaaagggtctgagaataaagaggacgaa
aaaaaggatgcaggaacaacatcagagattcaagaggaggggattcgcctgaaaatacgg
ggaattactcatcgaaggaaagctgagctccagagaacggagagggactctgggtccgat
actggtgagactgggagatcccttaggaggtcacccaggatttgcaggccaaccgctaag
ggggtggagttccaggacaggaggctggagaaaaaagagaccacgccccctgaggaggag
gaggacgaggaggaggaaactgttcagaggaaaccgagagaaaagcttgatcaagatgga
cagtccaaatctaaggggcgacggaggagaaagacccggtggtccaacactcgaacacga
cggcgcaaaaagaatggttctggtgatgacaatgaaagcgaatcaagcgaagaggagagt
gaggaggatgacagtgatgagagctttaaggtggagaagggcaagaggaggtggaggaac
cggaacagagaaaggcacagcgacgactctgacacctcctcggatgatgacctccctcct
aacgaagacccctgcaaacactgcggcctccccaaccatcccgagctgatcttgctatgt
gactcgtgtgacagtggctaccacacagcctgcctcagaccccctctcatgatcatccca
gatggggagtggttctgtccaccctgccaacataagctactctgtgacaagcttgaggag
cagcttgctaatctcgatgctgccctgaaaaagagggatcgcgctgagcgaagaaaagaa
cgtttggtctatgttggaataagtgtcgaaaacatcatcactccctctttggaggtagag
gaagaaagggaggaagaaaaggaggaagaagtgaagaaggagaagaaggagaagaaagag
aaaagcaagagctggggtcgaaggtcgacaagggcaaagaaaagcataagttacaggttt
gatgaatttgatgaggctatcgaggaagcaattgaagaagacatcagagaggctgatggt
ggaggagctggtcggggcaaggacatggccaacatcacaggccatagcagagggaaggac
atgtccaccatcctggcagcaggcgaggttggtgagggcaaggagaatggacgcccgcca
cggcccaacgccggccagcgcaggaagaagcgccggcgtctcaacgacctggacagcgac
agcactgtggaggaggaggagagcgaggacgagttccgtctcagtgacagtacggaggaa
gaggagtttgtggcgtcagacaagagcgacgcagagagcgaagcggcagtcgactctaac
gacgacagtgacttcggcagcacgcgacgcagaactgccaggacaaggaggccggccaaa
tgtcaaaggagcactcggccgcgaaggcgccgcagagcgagagggtactcagacgatgaa
gaggaggagacgagtgatgaagatgaggacgaaattatgtcagagggttccagcgagttc
agcgacagcgacctggactgtagccaacgccgatcccgccgtagtcatacaaagaggcag
gtcaactactgcgagtcgtccggcgactccgatggctcaaaggccggcaccaaccgggac
aaagtcaaaccgcggcggcgcctcgccagctccgacagcgaagcaagctcctccagaggc
tcggacgacgacaagagggagaggactaggttgaagaggagggctgactcgtctgaggaa
gagtcccagcagcgccgcagacgcctctcgctgaaacggaggcgagcctccgaggaggac
gatgacgattccgatgaatcatcggagggagagcgtccggtccgcaagcgtgtgaaccgc
atcgactcggacgactctgacaaggaggaggagaaggaagaaacaaaggaagaggaggaa
gggggggtgctggggaagggagccagcccattggactacaacctggtggaactgcacccc
cctaccaacggacagagtcccatcaaggccctggagggcctggctcacattgggccccaa
aaacctggagccacagccgtcaccatagcgcccaacggactggagttggcgccacaggac
gatgatgaagatgacctgctgggggtcacagacctagtggactttgtctgcaatagtgat
gtgttgtaa
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integrated database retrieval system
