Oncorhynchus nerka (sockeye salmon): 115105362
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Entry
115105362 CDS
T07952
Name
(RefSeq) interferon regulatory factor 2-binding protein 1-like
KO
K22383
interferon regulatory factor 2-binding protein
Organism
one
Oncorhynchus nerka (sockeye salmon)
Brite
KEGG Orthology (KO) [BR:
one00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
one03000
]
115105362
04121 Ubiquitin system [BR:
one04121
]
115105362
Transcription factors [BR:
one03000
]
Eukaryotic type
Zinc finger
Other zinc fingers
115105362
Ubiquitin system [BR:
one04121
]
Ubiquitin ligases (E3)
Atypical E3
115105362
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
IRF-2BP1_2
zf-C3HC4
Motif
Other DBs
NCBI-GeneID:
115105362
NCBI-ProteinID:
XP_029483174
LinkDB
All DBs
Position
LG22:40073457..40076477
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AA seq
593 aa
AA seq
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MSSASQASSRRQWCYLCDLPKMPWAMLWEFSEAVCRGCVNYDGADRIELLIETARQLKSS
HGVLDGRSPGPQQGKPSSGGPMEGGRQHAERLDRGRGEYGVSPRLPNGLHRAEDVSMSEG
SRQSPNTRRAMAGAAPALHGTIPHALIAQGLVGAPHGLLAPVSGTRAGGQQMAGSSGHIM
GGDGRRQVMSAMSLGAGASTLVGLEAGWRNGEVMAELAESARSRAEGWPNRPRAVRDVLV
TLCGCAPFSVRFRKDHNLVGRILAFEAGTGPEFELKVFVEYPSGSGIVFSGIPELVRQMF
RDSNKDAGKAVNSGLRYVEYERRQGAGDWRALTELLSDGVRSFKEPPMPEILPQPYTDAG
MPMAPAGRSAPTKGAARRRKASPSSENGESDGRPMGDHPAREPWSRGAYPGMEPLGSGMT
NPQDGLPRSHSQPSPISALMGVADSLSSSQMSRDGPGLSSAHSSAVGRPTSGSPSSASTA
VSQADMGQGAQGGPSTTSAGDSGSGALLCCTLCRERLEDTHFVQCPSVPHHKFCFPCTRG
SIRSQGPGGEVYCPSGERCPLAGSTVPWAFMQGEISTILAGDGDVTVKKENDP
NT seq
1782 nt
NT seq
+upstream
nt +downstream
nt
atgtcctccgcctcgcaggcatcctctagacggcaatggtgctacctatgcgatctgccc
aagatgccctgggccatgctctgggaattcagcgaagctgtttgccggggatgcgtgaac
tacgacggggcggacagaatcgaactcctaattgagacggccaggcagttgaagagtagc
cacggtgttttggatggaaggtccccgggacctcagcaaggcaaacccagctcaggtgga
ccgatggaaggagggaggcagcatgcagaacgtttagacagggggaggggagagtatggc
gtttcaccccgcctccccaatggtctgcacagagctgaagatgtgagtatgtcagagggg
agcagacagagccccaacactagaagggctatggctggggccgcacctgctctacatggg
accatacctcatgctttgatagcccaggggttagtgggggcccctcacggcttgttggcc
cccgtttcaggcaccagagctggtggccagcagatggctggttcctctggccatataatg
ggtggtgatggaaggcgccaggtaatgtcagccatgtcgctgggggctggtgcctccact
cttgtgggtctggaggcaggctggaggaatggtgaggtcatggctgagctggcagagagt
gccaggagccgggcagagggctggcccaaccgccccagagcagtacgagacgtcctggtg
accctctgcggctgtgcccccttcagtgtgcgcttcaggaaagaccacaacctggtgggg
cgcattctcgctttcgaagccgggaccgggcctgagtttgagctgaaggtgtttgtggaa
taccccagcggctctggaatagtcttctcgggcatcccagagcttgtcaggcagatgttt
cgtgactcaaacaaagatgcgggcaaagcggtgaactcagggctgcgttacgtggaatat
gagaggcgacagggcgctggggactggcgtgcgctcacggagctccttagtgacggtgta
cgctcgtttaaggagccaccgatgcccgagatcctcccacagccgtacacagatgcgggc
atgcccatggcgcccgcgggccgctctgcacctaccaagggtgctgcacggcgacgcaaa
gcatcaccaagctctgaaaacggagagagtgatggaaggcccatgggagatcacccagcc
agagagccctggtctcgaggtgcatatccaggcatggagcccctaggctcaggcatgacc
aacccccaggacggcctgccccgctcacacagtcagccctcgcccatctcggcgctcatg
ggagtggccgacagcctaagctcaagccagatgtcccgagacggccccggcttgtcctca
gcccattcctccgcagttggccgcccaaccagcggcagtccctcctctgcctccaccgct
gtctcccaggcagatatgggccagggtgcccaaggggggccgagcactaccagcgctggg
gattccgggagtggcgccctgctttgctgcaccctctgccgagagcgcctggaagacact
cactttgtccagtgtccgtctgtcccgcaccacaagttctgcttcccatgcacgcgtggc
tccatccgcagtcagggccctggaggagaggtgtactgccccagcggcgagcgttgtccc
ctggccggatccaccgtgccctgggctttcatgcagggagagatctccaccatcctggcc
ggagacggcgacgtgacggtgaagaaggagaacgacccctga
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