Oncorhynchus nerka (sockeye salmon): 115105373
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Entry
115105373 CDS
T07952
Name
(RefSeq) cytotoxic and regulatory T-cell molecule-like isoform X1
KO
K16361
cytotoxic and regulatory T-cell molecule
Organism
one
Oncorhynchus nerka (sockeye salmon)
Pathway
one04517
IgSF CAM signaling
Brite
KEGG Orthology (KO) [BR:
one00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04517 IgSF CAM signaling
115105373
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
one04515
]
115105373
04090 CD molecules [BR:
one04090
]
115105373
Cell adhesion molecules [BR:
one04515
]
Immunoglobulin superfamily
Nectin family
115105373
CD molecules [BR:
one04090
]
Proteins
115105373
BRITE hierarchy
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Ortholog
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GFIT
Motif
Pfam:
Ig_3
I-set
ig
V-set
Ig_2
C2-set_2
Lep_receptor_Ig
Dsc3_C
Orf78
Motif
Other DBs
NCBI-GeneID:
115105373
NCBI-ProteinID:
XP_029483198
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Position
LG22:40437873..40448682
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AA seq
433 aa
AA seq
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MALMLQLCFLVLFVRGSIAVEHLTVMEGETLTMKCRIRNAEGSHVEWKNPDGHVMFFNNQ
KALKDKRYKIINLSDSVFSVSVSDVTFKDGGLYTCLHYIHKVPVVKWVNVTVLGKPKLEI
TEHNGKTAIKCSAVGNGHPPKISWLLESGLEIYAQPQYLLDKNTYSSLDILHVQSYKRRV
TLKCIVRHPALHNSSLMNFVKIGQNPTEESHSTTRASHWLSTGLTEVTTTVSRWHSTQVS
TETPTATALNWPNTEGSPASTPDLQLSTHNWLSVSQTTENTPHNGTGHNSSNAKGSFFND
TETQKGTGGSALLLILLVTGLILGLLVVVSLFVIKLRRAHILWKKVLIITENDDSDQSVE
SNRSKSSNEEKQSRGRRGNGLFNIRFTKYVVEEPMATETMTTTNIKTEEDPEIQVIPQKN
GATHSPQNKEREL
NT seq
1302 nt
NT seq
+upstream
nt +downstream
nt
atggcactaatgctgcagctttgcttcctagtcttgtttgtaaggggatccattgcagtg
gaacatttgactgtgatggagggtgagacactaaccatgaagtgtcgcattagaaatgcc
gaagggagccacgtggaatggaagaatcctgatgggcatgttatgttttttaataaccag
aaggccctgaaggacaagcgctacaagataataaacttgtctgactccgttttttcagtc
agtgtgtctgatgtcaccttcaaagatggaggcctctacacatgtttacattacattcac
aaagtacctgtagtgaagtgggttaatgtgacagttttgggtaagccaaaattggagata
acagaacacaatggaaagactgccataaaatgttctgcagtgggaaatggccatcctccc
aaaatctcatggctgttggagagtgggttagaaatatatgctcagcctcagtatctgttg
gacaaaaacacatattcctccctggatatcttgcatgttcagtcctacaagaggagagtc
acattgaaatgcattgttcgccatccagccttacacaattcatccctgatgaattttgtg
aagattggacagaatcccactgaggaatcacactccactacgagagcctctcattggctc
agtacaggtctaacagaggtaacaacaacagtctcccgttggcatagtacacaggtgtca
acagaaacaccaacagctacagccttaaattggcccaatacagaaggatcaccagcatca
acacctgacttacaactcagcactcacaattggttgtcagtgtcccagacaacagagaac
acacctcataatggcacaggacacaactccagcaatgctaaaggaagcttcttcaatgat
acggagacgcagaaaggaactggaggaagtgcgctgttgctcatcttacttgtaacaggc
ctcatccttggtctgctcgtggttgtttcgctcttcgtgatcaagctgaggagggctcac
atactctggaagaaagttttgatcattacagaaaatgacgactcggatcaatctgtggaa
agcaacagatcaaaatcaagcaatgaagagaaacaatctcgaggaagaaggggcaatgga
ctgtttaacatcagattcacaaagtatgtcgttgaggaacccatggcaacagagacgatg
acaacaacaaacatcaaaacagaagaggatcctgaaattcaagtcatcccacagaaaaat
ggagcaacccatagccctcagaacaaggagagggaactgtaa
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