Oncorhynchus nerka (sockeye salmon): 115105388
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Entry
115105388 CDS
T07952
Symbol
rnf43
Name
(RefSeq) E3 ubiquitin-protein ligase RNF43
KO
K15694
E3 ubiquitin-protein ligase RNF43 [EC:
2.3.2.27
]
Organism
one
Oncorhynchus nerka (sockeye salmon)
Pathway
one04310
Wnt signaling pathway
Brite
KEGG Orthology (KO) [BR:
one00001
]
09130 Environmental Information Processing
09132 Signal transduction
04310 Wnt signaling pathway
115105388 (rnf43)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
one04121
]
115105388 (rnf43)
Enzymes [BR:
one01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
115105388 (rnf43)
Ubiquitin system [BR:
one04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
115105388 (rnf43)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ZNRF_3_ecto
zf-RING_2
zf-RING_11
zf-C3HC4_2
zf-C3HC4
zf-rbx1
zf-RING_5
zf-RING_UBOX
zf-C3HC4_3
zf-ANAPC11
zf_RING_Vps8_fungal
PA
Motif
Other DBs
NCBI-GeneID:
115105388
NCBI-ProteinID:
XP_029483231
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All DBs
Position
LG22:complement(41002645..41168433)
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AA seq
862 aa
AA seq
DB search
MTVPQRRLAGLWPWLLIAALQVVFGQTGLELAAAVETERSAPRAVIKVTLLRHEPTGKPI
TLEGLFVGGSAGSAEGKLMQSHPLSLCNTSEDERQESDFISIVKLESPERKVPQCLPLLK
KARLALERGAQAVIFDVTDDKDAALELHESDSLPLPVVLVKAEDAEELMGLVNKNEEARV
RIDIKKEDPKWPHYDVGILLTIVLAILAIVLIFAFRYRCKSNRTWDSVHQQTMRAISRLE
TRMYSAQGCGGSQRHRGGWGSNSSSNSSPVCAICLEEFLDGQDLRIISCAHEFHKECVDP
WLLQHRTCPLCMHNIMGTELSRQPQRSRLQQTPEHSQGFLHPHPYPHAFPQHPIPFSMRP
HYPRGPSGPYPSLSHYSSSPPLDPQTLRFLPSWPLGSGCGYIHPTEGPGRPHKAGSSCRT
AGHPLGSHYGPGSHRSCHAYRSGCPAQRSNSSSRLHHTPSFAPHISEGGAHSRGAEGGSC
SGGSYRTERSGYLADGPASDSSSGPCHGSSSDSVLNCTDVSLQGVYGSWSTFRSSLSSDY
DPFVYYGPGLGRTGRRDSMEAGAQRPRSLDSVMNRDRGRGSPEEQPQAVFSHVHYHRHRH
HHYGEDGEREHAQGQGPGRGSDEEQRAAVAIGSGTGSPPALDKDFPVCPLKHSPCQCPKA
EHTDSREVHGHGIEGQDHELSLSPPSGPPPALVAPAPLAAPAPCCHQDHGRGGHPHRRAD
RLGGCVLDGPSVLFHQSLELQDDCSIHIHYGQGPSYCCPPPDLPMPVPFILDSGGMGALG
GLEDWPCCGGPHHVVWQKRVQQAHSEPQLLGPGLGGPMDRPPPPCSRRHHGHHSPAHDRN
TDFCLYCQTLHNNQGSEEESGV
NT seq
2589 nt
NT seq
+upstream
nt +downstream
nt
atgaccgttccccagcggcgattggccgggctctggccgtggctgctcatagcggccctg
caggtggtgttcggccagacgggcctggagctggcggcggccgtagaaacggagcgctcg
gcccccagggctgtcatcaaggtgacactgctgagacacgagcccacggggaagcccatc
actctggaagggctgttcgtcggagggagcgccggctctgcagaggggaagctcatgcag
tctcaccctctgtccctgtgcaacaccagtgaagatgagcgccaggagtctgacttcatc
agcatcgtcaagctggagagcccggagcgcaaggtgcctcagtgtctgcccctgctcaag
aaggctcgcctggcactggagagaggtgctcaggctgtcatcttcgatgtcaccgacgac
aaagacgctgctctcgagctgcatgagtctgactccctgccgcttccggtggtgctggtg
aaggctgaggatgctgaggagctgatgggactggttaacaagaacgaggaggctagagtc
cgtatcgacatcaaaaaagaggacccaaaatggccccactatgatgttggtatcttgctt
actatagtcctggctattctggccatcgttttgatctttgccttccggtaccgatgcaag
tccaacagaacctgggactcagtccatcagcagaccatgcgagccatcagtcgtctggag
acgcgaatgtacagcgctcagggctgcgggggctcacagcgccaccgtgggggctggggg
tctaatagcagctccaactccagccccgtctgtgccatctgtctggaggagttcctggat
ggacaggacctgaggatcatctcgtgtgctcatgagttccataaggagtgtgtggacccc
tggttgctgcagcaccgcacctgtcctctctgcatgcacaacatcatgggtacagagctg
tcacgtcagccccagaggagcagactgcagcagacccccgagcacagccagggtttcctg
cacccccacccctacccacacgccttcccccagcatcccatccccttctccatgaggcct
cactacccccgtggcccctccggcccctacccctccctgagccactacagcagctcccca
cccctggacccccagaccctccgcttcctccctagctggcctcttggctccggctgtgga
tacatccaccctacagagggccccgggaggcctcacaaggccgggagcagctgcaggacg
gcaggtcaccctctggggtcccactacggccccgggtcccaccgctcctgccacgcctac
cgctccggctgccctgcccagcgcagcaactccagttccaggctccaccacaccccctcc
tttgctccccacatctccgaagggggagcccatagccggggggccgagggaggcagctgc
tctggggggagctaccggacggagcgcagtggctacctggcagacgggccggccagtgac
tccagctctggcccctgtcacggttcatccagtgactctgtgctcaactgtaccgacgtg
tccctgcagggtgtgtatggtagctggtccacgttccgcagctccctgagcagtgactat
gatccgtttgtgtactacgggccgggtttgggacggacaggccgcagggacagcatggag
gcaggggcccagagaccaaggtccctggactcagtgatgaacagagacagaggacgaggg
agccctgaggagcagccgcaggctgtgtttagccacgtccactaccaccgccacagacac
caccactacggagaggacggggagcgggagcacgcccagggacaggggccaggcaggggg
tcagacgaggagcagagggctgctgttgctattggctctggtactggttctcccccggct
ctggacaaggacttcccagtgtgccctctgaagcacagcccctgtcagtgccctaaggca
gaacacacagacagtagggaggtccacggccacgggatagagggtcaggaccatgagctt
agcctcagccccccgtcaggcccccctcctgccctggtagcaccagcacccttggcagcc
ccagccccctgctgccaccaggaccacggccgtggaggccacccccaccggagagcagac
cggctcggcggctgcgtcctcgatggcccctcggtgctcttccaccagagcctggaactg
caggatgactgtagcatccacattcactacggccagggccccagctactgctgccccccg
cctgacctgcccatgcctgtgcctttcattctggactctgggggtatgggggccctaggg
ggcctagaggactggccctgctgtggagggccccaccatgtagtgtggcagaagcgggtg
cagcaggcccactctgagccccagttgctggggccagggctggggggccctatggacaga
cccccgcccccatgcagcaggcgtcaccacggtcaccacagcccagcgcacgaccgcaac
acagacttttgtttatactgccaaacattacacaacaatcagggatcagaggaggagtcc
ggtgtgtga
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