Oncorhynchus nerka (sockeye salmon): 115105413
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Entry
115105413 CDS
T07952
Name
(RefSeq) homeobox protein PKNOX2-like isoform X1
KO
K24891
homeobox protein PKNOX
Organism
one
Oncorhynchus nerka (sockeye salmon)
Brite
KEGG Orthology (KO) [BR:
one00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
one03000
]
115105413
Transcription factors [BR:
one03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain TALE
115105413
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Meis_PKNOX_N
Homeobox_KN
Homeodomain
RNA_pol_3_Rpc31
Merozoite_SPAM
DUF7645
Med4
Motif
Other DBs
NCBI-GeneID:
115105413
NCBI-ProteinID:
XP_029483298
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All DBs
Position
LG22:complement(44465620..44552005)
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AA seq
516 aa
AA seq
DB search
MMQHVSPALTMMATQSVPPPSYQESQQMTGTTQQNSKAQQVHISASSETGNTPINVTLDP
QAQLESDKRAVYRHPLFPLLALLFEKCEQATQGSECITSASFDVDIENFVHQQEQDHKPF
FSEDPDLDNLMVKAIQVLRIHLLELEKVNELCKDFCNRYITCLKTKMHSDNLLRNDLGGP
YSPSHTSLSLQQDLLQTSSPSMTSVSSSVNSSGIMMPTGTLQQGNIAMTTINSQVVSGGT
LYQPVAMVTSQGQVLTQGLSQGTIQIQNSQTAAASVNTQDPAEAALYTWSGNRVQPRSYI
TDKLPVNLDLASLLDSDDKKHKNKRGVLPKHATNIMRSWLFQHLMHPYPTEDEKRQIAGQ
TNLTLLQVNNWFINARRRILQPMLDASNPDPAPKAKKMKSQHRPTQRFWPDSIVAGVLQT
HGPHSNNADNPLGLDSLQPLSSDSATLAMQQAMLGGTDDSMDGTEEEEEEEEEEEEEEVM
EEEEEDEEEEESEGGRRISGGGGRRDLGMEHREGLE
NT seq
1551 nt
NT seq
+upstream
nt +downstream
nt
atgatgcaacatgtgtccccagcactaacaatgatggccactcagagcgttcctccacca
tcgtaccaggagagccaacagatgacgggcaccacccaacagaactccaaggcccaacag
gtccacatctcagcatcctcagaaactggaaatacccccatcaatgtgacccttgacccc
caggcccagctggagtcagataagcgggccgtttacagacatcccctattcccactgctg
gccctgctgtttgagaagtgtgagcaggccacccagggctctgagtgcatcacctctgcc
agcttcgatgtggacatcgagaactttgtgcatcagcaggagcaggaccacaagccattc
ttcagcgaggaccccgacctggacaacctgatggtgaaggccatccaggtgctgaggatc
caccttctggagctggagaaggtcaatgagctctgcaaggacttctgcaaccgctacatc
acctgcctcaagaccaagatgcacagcgacaacctgcttcgcaatgacctgggcgggccc
tactcgccctcgcacacctcgctcagcctgcagcaggacctcctccagacatcctctccg
tccatgacatcagtctccagctccgtcaactcctcgggcatcatgatgcccaccgggacc
ctgcaacagggtaacattgccatgactaccatcaactcccaggtggtgtcaggtggcacc
ttgtatcagccggttgccatggtgacgtcgcaagggcaggtgttaacccagggactctcc
caggggaccatccagatccagaattcacagacagcggcggcctcagtgaatacccaggac
ccagccgaggcggcactctacacgtggtctgggaatagagtgcagccccgtagctacatc
accgacaagctcccggtaaacctggacttggcttcactcttggacagtgatgacaagaag
cacaagaacaagagaggggtcctgcccaagcacgccaccaacatcatgcgctcctggctc
ttccagcatctcatgcatccttacccaacagaggacgagaaaagacagattgcaggacaa
acaaatctgaccttattacaggtcaacaactggtttatcaacgctcgcaggcgcatcctc
cagcccatgctggatgccagtaacccagacccagctcccaaggctaagaagatgaagtcc
caacaccgtccaacccagcgcttctggccagactccattgttgctggcgtcttgcagaca
catggacctcactctaacaacgctgacaaccccttaggtttggacagcctccagcccctg
tcctctgactcagccaccctggccatgcagcaagcaatgctgggtggaaccgacgactcc
atggatggcacagaggaagaagaggaggaggaggaggaggaggaggaagaggaagttatg
gaggaggaagaggaagatgaggaggaggaagagagcgagggagggagacgtatatctggc
ggcggaggaaggagagatctgggcatggagcatagagaggggctagagtaa
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integrated database retrieval system
