Oncorhynchus nerka (sockeye salmon): 115105427
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Entry
115105427 CDS
T07952
Name
(RefSeq) cell adhesion molecule 1-like isoform X1
KO
K06781
cell adhesion molecule 1
Organism
one
Oncorhynchus nerka (sockeye salmon)
Pathway
one04514
Cell adhesion molecules
Brite
KEGG Orthology (KO) [BR:
one00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
115105427
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
one04515
]
115105427
Cell adhesion molecules [BR:
one04515
]
Immunoglobulin superfamily
Nectin family
115105427
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Ig_3
I-set
Ig_2
ig
C2-set_2
V-set
Ig_5
C1-set
C2-set_3
Adhes-Ig_like
Syndecan
Motif
Other DBs
NCBI-GeneID:
115105427
NCBI-ProteinID:
XP_029483328
LinkDB
All DBs
Position
LG22:complement(45868602..46301668)
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AA seq
441 aa
AA seq
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MAITGNGSLATLLFLFMIPAALHKGAAQYPVQSQNLVTDNVAVVEGEVAVISCRVKNNDD
SVIQLLNPNRQTIYFRDVRPLKDARFQLVNFSDNELRVSLSNVTLSDEGRYVCQLYTDPP
QEAYADITVLIPPGNPIIESREGQVIEGNETEMTCTAMGSKPAATIRWMKGDKELQGKSK
VEEMYDTMFTVTSQLTFTVTKEDDGVPVVCIVDHPAVKDVQAQTYLVVHYKPEVKIVVEF
PDGLPREGQNMELSCQAKGKPHPQQINWVKVDDDLPSHALITGPDLYIENLNKTYNGTYR
CFAANSVGESYDDYILYVYDAPTTTPIPTTATTTTPTTTTISLPEATADTTPSTEPAAHD
SRAGEGAPRAVDHAVIGGVVAVVVFAMLCLLIILGRYFARHKGTYFTHEAKGADDAADAD
TAIINAEGGHNNSDEKKEYYI
NT seq
1326 nt
NT seq
+upstream
nt +downstream
nt
atggcgatcacaggcaacggatctctcgctactcttctctttttgttcatgattccagca
gctcttcataaaggagctgctcagtacccagtccagagtcagaacctagtgacggacaat
gtggcggtggtggagggagaggtggccgtcatcagctgccgggtgaagaacaacgacgac
tcggtcatccagctcctcaaccccaacagacagacaatctatttcagagacgtccgaccc
ctgaaagatgcccgcttccagctggtgaacttctcggacaatgagctgcgggtgtctctg
tccaacgtgaccctgtctgacgaggggagatacgtgtgccagttgtacacagaccctcca
caggaggcctacgctgacatcactgtgctgatccctccaggcaacccaatcatcgagtcc
cgggaggggcaggtaatcgagggcaatgagacagagatgacctgcaccgccatgggcagc
aagcccgccgccaccatcagatggatgaagggagacaaagagctccaaggtaagtcgaag
gtagaggagatgtacgacaccatgttcaccgtgaccagccagctgacgttcaccgtcacc
aaagaggatgacggtgtgcccgtggtgtgcattgtggatcacccagccgtcaaagacgtc
caggcccagacgtaccttgtggttcattataaaccagaggtgaagatcgtggtggagttt
cctgacgggctgccaagggaaggacagaacatggagctgtcgtgccaggccaaaggcaaa
ccccatccccagcagatcaactgggtgaaggtggacgacgaccttccctcacacgccctc
atcaccggccctgacctgtacatcgagaacctcaacaagacctacaacggcacctaccgc
tgcttcgctgccaactcagtgggcgagtcgtatgacgactacatcctctatgtctatgat
gcccccaccactacccctatacccactacagctactaccaccactcccaccaccacaacc
atctccctccctgaagccactgcagacactacgcccagcactgaacccgcagcacacgat
tccagagctggagagggagcaccgagagcggtcgaccatgcagtcattggaggagtggtg
gctgtggttgtctttgccatgctctgtctactcatcattttgggacggtactttgcaaga
cacaaaggtacctacttcacgcatgaagctaaaggagccgacgatgcagcagatgcagac
acagccattatcaacgcagaggggggccacaacaactcggacgagaagaaggagtactac
atatag
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