Oncorhynchus nerka (sockeye salmon): 115105439
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Entry
115105439 CDS
T07952
Name
(RefSeq) E3 ubiquitin-protein ligase rififylin-like isoform X1
KO
K20804
E3 ubiquitin-protein ligase RNF34 [EC:
2.3.2.31
]
Organism
one
Oncorhynchus nerka (sockeye salmon)
Brite
KEGG Orthology (KO) [BR:
one00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
one04121
]
115105439
Enzymes [BR:
one01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.31 RBR-type E3 ubiquitin transferase
115105439
Ubiquitin system [BR:
one04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
RBR proteins
115105439
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNF34L-like_3rd
SAP_RNF34_RFFL
FYVE_CARP1-2
zf-C3HC4_3
ARMET_C
Prok-RING_4
FYVE_2
SDE2_2C
Motif
Other DBs
NCBI-GeneID:
115105439
NCBI-ProteinID:
XP_029483363
LinkDB
All DBs
Position
LG22:47504487..47515103
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AA seq
344 aa
AA seq
DB search
MWTSCCSWSCLEPTATVEENGSSWRQAYTNSGNSQSPISPELLCKACGGHFDTIAIKHVC
VDCKKNFCGRCSVQLEPPCPRLCHTCQRFHGTLFDRAQLMRLKVRELRDYLHLHEVPTQT
CREKEELVELVLGQQTPSTSRSNETVSSQPGAHNNVPSPDTPSPPQTQGPTSPDTLSPEQ
PEQSAPEAESEHISDEEEEEEDEDEESSDSEETLMPGRRASLSDLSRVEDIEGLSVRQLK
EILARNFVNYKGCCEKWELMERVTRLYNDQKDLQNLVSNTKNEEDPAAPKSQEENLCRIC
MDSPIDCVLLECGHMVTCSKCGKRMSECPICRQYVVRAVHVFRS
NT seq
1035 nt
NT seq
+upstream
nt +downstream
nt
atgtggacatcctgttgtagctggtcctgtttggaacctaccgccacagtggaagaaaac
ggcagctcatggcgccaggcctacacaaactcgggcaacagccaatccccgatctctccc
gaacttttgtgcaaggcctgcggaggccattttgacaccatcgctataaagcatgtctgt
gtggactgcaagaagaacttctgtggccgctgctcggtgcagctggagccgccatgcccg
cgcctctgccacacatgtcagcgatttcacggaaccctcttcgaccgcgcccagttgatg
agactcaaggtgcgggagctgcgtgactacctccacctgcacgaggtgcccacccagacg
tgccgggaaaaggaggagctggttgagctggtcttgggccagcagacccccagcaccagc
agaagcaatgagaccgtgtcctcccagcccggggctcacaacaatgtcccctccccagac
acaccgtctcctccccagacacagggccctaccagccccgacacattgagcccagagcag
ccagaacaatcagcccctgaggcagaatcagagcatatctctgatgaggaagaagaggag
gaggatgaggatgaagagtcatcggacagcgaggagaccctgatgcccggccgcagagcc
tctctgtctgacctgagccgcgtggaggatatcgagggcctgagcgtgcgccagctcaag
gagatcttggcccgcaactttgtcaactacaaaggctgctgcgagaagtgggagctgatg
gagagggtcacccgcctctacaacgaccagaaggacctccagaacctagtttcaaataca
aaaaatgaagaagaccctgcagctcccaagagccaggaggagaacctctgtcggatctgc
atggactctcccattgactgtgtgctgctggagtgtggccacatggtcacctgcagcaag
tgtggcaagcgcatgagcgagtgccccatctgcagacagtacgtggtacgggcggtgcac
gtcttcaggtcctga
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