Oncorhynchus nerka (sockeye salmon): 115105468
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Entry
115105468 CDS
T07952
Name
(RefSeq) rab GTPase-binding effector protein 1-like isoform X1
KO
K12480
Rab GTPase-binding effector protein 1
Organism
one
Oncorhynchus nerka (sockeye salmon)
Pathway
one04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
one00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
115105468
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
one04131
]
115105468
Membrane trafficking [BR:
one04131
]
Endocytosis
Rab GTPases and associated proteins
Rab associated proteins
115105468
Protein recycling
Rab4 associated proteins
115105468
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rabaptin
Rab5-bind
FPP
ACBP4_C
ERM_helical
Fez1
ATG17_like
Ad_cyc_g-alpha
Motif
Other DBs
NCBI-GeneID:
115105468
NCBI-ProteinID:
XP_029483419
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Position
LG22:complement(48595299..48630751)
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AA seq
859 aa
AA seq
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MAEQATESARQPQHDVVLQQRMAALEQERAEFFKLKQQLESEFNQKRAKFKELYMSKEEE
LKSQAASLEGAHSELSRVQAQLEQAQADMENIKAVATVSESTKQEAVDQVKGQWQEEVTS
LQAIMKDTVREYEVQFHQRLEQERAQWNQYREAVEREMGELRHRLSEGGQEEENLENDMK
KAQEGAEKLRSVVMPMEQEMAALKAKLTMAEDRVKELEASKVKELNHVLEAEKSCRTDLE
MYVAVLNTQKSVLQEDAEKLRKELHEVCHLLELERQQHNQLKHTWQRANDQFLESQRLLM
RDMQRIENVLSSEQLRQVEEIKKRDQEEDDNESIIQAKEQNEEDGTETEPLEDSFLGLST
EEHHSAHGSMYSLDTDLVAGGPLDSYKDCLRRVQSTDSLGSSPGLQGLGGHNHKAKSASH
LDESDFGPLVGADCGASEGLAGFGDTLSVSSIQLTAGHFLLTKDQEKAIKAMTPEQEETA
SLMSSISHAPDTAFLSPSGYRLVSDQEWNLLQQEVKNAGRKLGRRCDMCSNYEKQLQVIQ
GQEAETRDQVKKLQVMLRQANDQLERILSEKQELEDTVKKGNEETTAKVAALMQRVHESE
LLLNTLQEAFSQAKRNTQEQMAVLMQSREQVADELSRLQRDNDSLTGKHRLHLSLQQQED
FKLPTTVQELQPLVLQLREDIVAVRTAADHLEEKLKAEILFLKEQLQAEQCFKENLEDTL
QMEIEGYKEEKDILEASFSSLKTELERVKDEKEQLESSLAEKSKTLASVQGLKSSLEEQL
RDLTTTKTSLEAQALDEKDKAQRLQTELDVSEQVQRDFVKLSQNLQVQLERIRQTDSLDR
IRAILNNTNLTDISQLPET
NT seq
2580 nt
NT seq
+upstream
nt +downstream
nt
atggccgaacaggccacggaatccgcccggcagccccagcacgacgtggtgctccagcag
cgaatggcagccctggagcaggagagagcagagttcttcaagctcaaacaacaactggag
tctgagttcaaccagaaacgggccaagttcaaagagctctacatgtccaaagaagaggag
ctgaaaagccaggcagcgtctctggagggagcccattcggagctgagtcgtgtccaggcc
cagctggaacaggcccaggcagacatggagaacatcaaggcagtggccactgtgtcagag
agcaccaagcaggaggccgttgaccaggtcaagggacagtggcaggaggaggtgacctcc
ctacaggccatcatgaaagacacagtgcgtgagtacgaggtgcagttccaccagcgcctg
gagcaggagcgtgctcaatggaaccagtacagggaggcggtggagagggagatgggcgag
ctgagacaccggctctcagagggtggacaggaggaagagaacttggagaacgacatgaaa
aaggctcaggaaggtgcagagaagctgcggtcggtggtgatgcccatggagcaagagatg
gcagctctgaaagccaagctgacaatggcagaggacagggtaaaggagctggaagcctca
aaggtaaaggagctcaatcatgtcctggaagcagagaaatcctgccgcacagacctggag
atgtacgtggcggtgctcaacactcagaagtctgtcctgcaggaggatgcagagaaacta
cgtaaagagctccatgaagtttgtcacctactggagctggagcggcagcagcacaaccag
ctgaagcacacgtggcagcgggccaacgaccagttcctggagtcccagaggctgctgatg
agggacatgcagaggatcgaaaacgtgctctcctccgagcagctccgccaggtggaggag
atcaagaagagggaccaggaggaggatgataatgaaagtatcatccaggctaaggagcaa
aacgaggaggacgggacagaaaccgaacctttagaagactcatttcttgggctcagtact
gaagagcaccacagtgcccacggctccatgtactccttagacacagacctggtggcaggg
ggccccttggactcctacaaagactgcctgcggagggtccagtccacagacagcctgggt
tcctctcccggtctccagggcctggggggccacaaccataaggctaaatcggccagccat
ctggacgagtccgactttgggcccctggtgggggcggactgcggggcctctgagggcctg
gcgggctttggggacacactatcggtcagctccatccagctgacggccggccacttcctc
ctcaccaaggaccaggagaaggccatcaaggccatgacaccggagcaggaggagacggcc
tcgctgatgtccagcatttctcacgcccccgacaccgccttcctttccccatcaggctac
cggttggtcagcgaccaggagtggaacctgctacagcaagaggtgaagaacgcagggagg
aagttgggccggcggtgtgacatgtgctccaactacgagaaacagctgcaagtcatccag
ggccaggaggcagagacacgtgatcaggtaaagaagctccaggtgatgctgcggcaggcc
aacgaccagctggagagaatcctgagtgaaaaacaggagctggaggacactgtgaaaaag
ggaaacgaggaaaccactgccaaggtcgctgctctcatgcagagagtccacgagtcggag
ttgctgctcaacacactacaggaggccttcagtcaggccaagaggaacacacaggaacag
atggcagtgctgatgcagtctagggagcaggtggcagacgaactgagcagactgcagagg
gacaacgacagcctaacaggcaaacaccgactccacttatctctccagcagcaggaggac
ttcaaactacccaccacggtgcaagaactacaaccactggtgctgcaattgcgggaggac
atagttgcggtgcgcacggctgcagaccacctagaagagaagctgaaggcggagatcctg
ttcctgaaggagcagctccaggcagagcagtgcttcaaagagaacctggaggacacacta
cagatggagatagagggctacaaggaggagaaagacatcttggaagcgtcattctcgagt
ctgaaaaccgagctggagcgcgtgaaagatgagaaagaacagctggagagcagcttggca
gagaagagcaagacattagcgagtgtccagggtctgaagagcagtctggaggagcagctc
agagatctcaccacaaccaagacttccctggaggctcaggctttggatgagaaggacaaa
gcacagcgcttgcagacggagctggacgtcagtgagcaggtgcagagggactttgtcaag
ctctcccagaacctccaggtccagttggagcggatcagacagactgactctctcgaccgt
atccgagccatcctcaacaacaccaatttaactgacatcagccagctcccagagacatga
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