Oncorhynchus nerka (sockeye salmon): 115105484
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Entry
115105484 CDS
T07952
Name
(RefSeq) syntaxin-1A isoform X1
KO
K04560
syntaxin 1A
Organism
one
Oncorhynchus nerka (sockeye salmon)
Pathway
one04130
SNARE interactions in vesicular transport
Brite
KEGG Orthology (KO) [BR:
one00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04130 SNARE interactions in vesicular transport
115105484
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
one04131
]
115105484
Membrane trafficking [BR:
one04131
]
SNARE
Syntaxin (Qa)
Stx-PM
115105484
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Syntaxin
SNARE
Syntaxin_2
Spectrin_Anc-1_2
Dcst2
ATG17_like
GNVR
Lzipper-MIP1
Relaxase_C
PUB2_N
Herpes_UL25
Motif
Other DBs
NCBI-GeneID:
115105484
NCBI-ProteinID:
XP_029483448
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All DBs
Position
LG22:complement(49273635..49305892)
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AA seq
288 aa
AA seq
DB search
MKDRTHELRVGKETEEEDDVAVNMEKDRFMDEFFVQVEEIRGFIEELSEKVEEVKRQHSA
ILAAPNPDEKTKAELEQLMTDIKKFANKVRSKLKSIEQSIEHEEALSRSSADLRIRKTQH
STLSRKFVEVMSEYNATQSDYRERCKGRIQRQLEITGRNTTNEELESMLESDNPAIFTSG
IIMDSNITQQAMNEIETRHTEIIKLENSIRELHDMFMDMAMLVESQGEMIDRIEYNVEHS
VDYVERAVSDTKKAVKYQSKARRKKIMIIICCVVLGIVIASSVGGSLA
NT seq
867 nt
NT seq
+upstream
nt +downstream
nt
atgaaggaccgtacacacgagctaagggtggggaaggagactgaggaagaagatgatgtg
gcagtcaacatggaaaaagatcgatttatggatgagttctttgtacaggtggaggagatc
cgaggcttcatcgaggagctctcagagaaggtggaggaggtgaagagacaacacagcgcc
atcttggctgcccccaatcctgacgaaaaaacgaaggcagagctggagcagttgatgacg
gacataaagaagtttgcgaacaaagtgcgctccaagttaaaaagcattgaacagtccata
gagcatgaggaggctttaagcaggtcgtctgcagatctgaggatacgtaagacacagcat
tccacgttgtctcggaagtttgtggaggtgatgtcagagtataatgccacgcagtcggac
taccgggaacgctgcaagggccgcatccaaagacaactggagattactggtaggaacaca
actaatgaggaactggagagcatgctggagagtgacaaccctgccatcttcacatcaggg
atcatcatggactccaacatcacccagcaggccatgaatgagattgagacgagacacact
gagatcatcaagctggagaacagcatcagagaacttcacgacatgttcatggacatggcc
atgctggtagagagccagggggagatgatagatcgtatagagtacaacgtggagcactca
gtggactatgtagagagggccgtgtctgacaccaagaaggcagtgaagtaccagagtaaa
gccaggaggaagaaaataatgattattatatgttgtgtggttcttggtattgttattgcc
tccagtgttggtggaagtttagcatag
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integrated database retrieval system