Oncorhynchus nerka (sockeye salmon): 115105508
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Entry
115105508 CDS
T07952
Name
(RefSeq) arginine--tRNA ligase, cytoplasmic-like
KO
K01887
arginyl-tRNA synthetase [EC:
6.1.1.19
]
Organism
one
Oncorhynchus nerka (sockeye salmon)
Pathway
one00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
one00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
115105508
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
one01007
]
115105508
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
one03016
]
115105508
03029 Mitochondrial biogenesis [BR:
one03029
]
115105508
Enzymes [BR:
one01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.19 arginine---tRNA ligase
115105508
Amino acid related enzymes [BR:
one01007
]
Aminoacyl-tRNA synthetase
Class I (G)
115105508
Transfer RNA biogenesis [BR:
one03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Multi-aminoacyl-tRNA synthetase complex (MSC)
115105508
Prokaryotic type
Other AARSs
115105508
Mitochondrial biogenesis [BR:
one03029
]
Mitochondrial DNA transcription, translation, and replication factors
Mitochondrial transcription and translation factors
Other mitochondrial DNA transcription and translation factors
115105508
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_1d
DALR_1
Arg_tRNA_synt_N
Rab11-FIP3
tRNA-synt_1e
tRNA-synt_1
tRNA-synt_1g
ADIP
Cnn_1N
Motif
Other DBs
NCBI-GeneID:
115105508
NCBI-ProteinID:
XP_029483493
LinkDB
All DBs
Position
LG22:50468252..50482586
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AA seq
660 aa
AA seq
DB search
MGDPVAGYTSRIQQQELEIHSLTAELESLKNPQGLGLSSHLDGLREENAKLKYRLNVLKR
SLQEERSQCSKTMMNINQRLQEIFGEAIREACPDLENPPLAVTPNQQAKFGDYQCNSAMA
MAQMMKSKGLKVNPRQIAENIQQNIPDNELIEKTEIAGPGFINVHLKRSFVSKLLTNLLL
NGVQPPPLESKKKVVVDFSSPNIAKEMHVGHLRSTIIGDSMCRLFEFLGYDVLRLNHVGD
WGTQFGMLIAHLQDKFPNYLTVSPPIGDLQAFYKESKKRFDEEEDFKKRAYQCVVKLQSK
DPAFIKGWNLICDVSRNEFQKVYNCLDIQIIERGESFYQEKMTAVVKEFEAKGLVEMDEG
RKIVFAPGQQIPLTVVKSDGGYTYDTSDLAALRHRLFDEKADIIIYVTDSGQGTHFQVVF
AAAQMIGWYDPNVTRVEHAGFGVVLGEDKKKFKTRSGDTVRLMDLLDEGLKRSMEKLKEK
DRDKVLSTEDLTKAQRSVAFGCIKYADLSHNRINDYVFSFDKMLDDRGNTAAYLLYAFTR
IRSIARLANIDEAVLRKAAETTEVLLEHDKEWKLGKCLLRFPEILQKILDDLLLHTLCDY
LYELATTFTEFYDSCYCIEKDRQTGEVVKVNMWRMLLCDATAAIMAKGFDILGINPVSRM
NT seq
1983 nt
NT seq
+upstream
nt +downstream
nt
atgggagatcctgtggctggttacacgtcccgaattcaacagcaggagctggagatccat
tccctgactgcagagctcgagagcctgaagaacccacagggcctgggtttgtcctcgcac
ctggatgggctgagagaggagaatgccaagctcaaataccgcctcaacgtcctcaaaagg
agtctgcaggaggagaggagccagtgtagtaaaaccatgatgaacatcaaccagcgcctg
caggagatctttggggaggccatccgggaggcctgtcccgacctggagaaccctcccctg
gccgtcacccccaaccagcaggccaagtttggggactaccagtgtaacagcgctatggcc
atggcccagatgatgaaatcaaagggcctgaaagtgaaccccaggcagatcgctgagaat
attcagcagaacattcctgacaatgagcttattgagaagacagaaatagccggaccaggg
ttcatcaatgttcaccttaagagatcgtttgtgtccaaactgctgaccaacctgctactc
aacggtgtccaacctcctcccttagagagcaagaagaaggtggttgtggacttctcgtct
cctaacatcgccaaggagatgcacgtaggtcacctgcgctccacaatcattggggacagc
atgtgtcgtctctttgagttcctgggctacgacgtcttgaggctgaatcacgtaggggac
tggggtacccagtttgggatgctcatcgctcacctgcaagacaagttcccaaactacctg
accgtatcccctcctatcggagacctgcaggccttctacaaagagtctaagaagcgtttt
gacgaggaggaggactttaagaagagggcctaccagtgtgtggtcaagctgcagagcaaa
gacccagctttcatcaaaggatggaacctcatctgtgacgtttccaggaatgaattccag
aaggtctacaactgtctggacatccagatcattgagagaggagagtccttctaccaggag
aagatgaccgccgtggtcaaagagtttgaggccaaaggcctggtggagatggatgagggc
cgtaagatagtgtttgccccgggccagcagatccccctgacggtggtgaagtctgatggt
ggctacacctacgacacatcagacctggccgcactgcgccaccggctctttgacgagaag
gcagacatcatcatctacgtgacggacagcggccagggcacccacttccaggtagtgttt
gcagcggctcagatgattggctggtacgaccccaatgtgacacgagtggagcacgctggt
ttcggagtggtgctgggagaggacaaaaagaagtttaagactcgctccggggacacggtg
aggctgatggatctgctggatgaaggcctgaagaggtccatggaaaaactcaaggagaag
gacagggacaaggttctgagcacggaggatctgacaaaggcccagcgctcggtggcgttc
ggctgcatcaagtatgccgacctgtctcacaaccgcatcaacgactacgtgttctccttc
gacaagatgctggatgaccggggcaacacggccgcctacctcctctacgccttcacccgc
atcaggtccatagcccggttggctaacatcgacgaggcagtgctccgtaaagcagcagag
accacggaggtgctcttggagcacgacaaggagtggaagttgggcaagtgtctcctgcgc
ttccctgagatcctgcagaagatcctggatgacctgctgctccacacgctgtgtgactac
ctgtatgagctggccacgaccttcacagagttctacgacagctgttactgtatcgagaag
gaccgccagacaggtgaggtggtaaaggtcaacatgtggaggatgctcctgtgtgatgcc
actgccgccatcatggccaaaggcttcgacatcctgggcatcaaccctgtctccaggatg
tga
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