Oncorhynchus nerka (sockeye salmon): 115105513
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Entry
115105513 CDS
T07952
Name
(RefSeq) CCR4-NOT transcription complex subunit 8
KO
K12581
CCR4-NOT transcription complex subunit 7/8
Organism
one
Oncorhynchus nerka (sockeye salmon)
Pathway
one03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
one00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
115105513
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
one03019
]
115105513
Messenger RNA biogenesis [BR:
one03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
115105513
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
115105513
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
CAF1
EKR
Motif
Other DBs
NCBI-GeneID:
115105513
NCBI-ProteinID:
XP_029483497
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All DBs
Position
LG22:complement(51340617..51344325)
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AA seq
285 aa
AA seq
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MPAALADTSQIICEVWASNVEEEMRKIRQIIQSYNSIAMDTEFPGVVVRPIGEFRSTVDY
QYQLLRCNVDLLKIIQLGLSFMNEDGDYPPGTTTWQFNFKFNLTEDMYSQDSIDLLQNSG
LQFKKHEEEGIDTLYFAELLMTSGLVLCENVKWLSFHSGYDFGYLVKLLTDTRLPEEEHE
FFQILNLFFPAIYDVKYLMKSCKNLKGGLQEVADQLELKRIGRQHQAGSDSLLTGMAFFR
MKELFFEDNIDDAKYCGRLYGLGSGSTQNQNGISSSSQEETNNKH
NT seq
858 nt
NT seq
+upstream
nt +downstream
nt
atgccagccgcacttgcagataccagtcagattatctgtgaggtctgggcaagcaatgtg
gaggaggaaatgaggaaaatccgacagataattcaaagctacaactccattgccatggac
acagaattccctggagtagtagttcgaccaattggcgagtttcgcagtacagtagattac
cagtaccagctcttgaggtgcaacgtggaccttctgaaaatcatccaattgggactgtcg
tttatgaacgaggacggagactatcctcctggaacaacaacatggcagttcaatttcaaa
tttaatttaacagaggatatgtactcccaggactcaatagacctactccagaactctggc
ctccaattcaaaaagcacgaggaagaggggatcgacacactttactttgctgagctcctg
atgacgtctggtttagtgctgtgtgaaaatgtcaagtggctctcctttcacagcgggtat
gattttggctacctggtgaagctcttaacggacactcgcctacctgaggaggaacatgag
ttcttccagatcctcaatctcttcttccctgcaatctatgatgtgaaatatctgatgaaa
agctgtaagaacttaaagggaggactccaggaagtggctgaccagctggaactgaaaagg
attgggagacagcaccaggccggttccgattcactgctcacagggatggcattctttagg
atgaaagagcttttctttgaagacaacattgatgatgcaaagtattgtgggcgattgtat
ggattgggctctgggtccactcaaaatcagaacggcatctcaagctcttcccaagaggaa
actaacaacaagcactga
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