Oncorhynchus nerka (sockeye salmon): 115105519
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Entry
115105519 CDS
T07952
Name
(RefSeq) thyroid hormone receptor-associated protein 3-like isoform X1
KO
K13112
thyroid hormone receptor-associated protein 3
Organism
one
Oncorhynchus nerka (sockeye salmon)
Brite
KEGG Orthology (KO) [BR:
one00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
one03041
]
115105519
Spliceosome [BR:
one03041
]
Complex B
Other components
Complex B specific factors
115105519
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
THRAP3_BCLAF1
Gln_amidase
Motif
Other DBs
NCBI-GeneID:
115105519
NCBI-ProteinID:
XP_029483512
LinkDB
All DBs
Position
LG3:15123029..15156113
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AA seq
1010 aa
AA seq
DB search
MSKATKSASKSRSHSGSWSRSRSVSRSRSSSRSRSRKHRHRWLTTSRSRTRSRSRSHSPS
HNNRERNYPREYQNNNREFRGYHRGFRRPYYFRGRGRGYFPRGRFQRGGGGGYNNNYRPN
NWQNYRQHPQQQQQQQQQQQQHPHSPRRGRSRTPKKRSGSPRSHSHSKVSDRSSSPRSRH
SRHSSSSHSSSPTRRSGSGSATQNSKDVKEERSASKEVQKKGGGEGEGEPVEITGVSAGP
DGSAGGEKPKANWQGVTDHSNSTSPRGSSPQVRSAVIIGQGAPASTQSSSSPKSTNANGS
NSNGAPSWQIQTVGSSPSTKSPSQKSPTPVFSGFGFFSKDDNLAGDKAAISSVFKRFLEE
HNHKKKQSAWENGREMETNDGDVEREKGNGMKASGGIFDREPDKGENEKYKYMEDFDDDR
NVSLNSFLKASPFFSCDGEEEDEETIPKSRPKVLRKERAREDDGSPKPKSKVTLSARELF
EERFGKWEDLAYLQAAAKDDDLDAMAEEIYRSQKQEKAMAIAAALVKREAIAGMLRGFSP
ENVSKDRRMEKAASSLSPIPAPRRNSDREMFMVRGEDSPPRGSEKRGAEFSVRMDSLRDD
VASSSGVMVGERRLSRDLVHPTKKEQEFRSIFQHIQATQLQRSPSELFAQHIVTIVHYIK
AQHFPSNGITLNERFAMYQRRAAQKEMMKPRKSPEIHRRIDVSPSAFKKHSHLFEGMKSS
GDGSYKDEGKKMKGDSMDLRLDIERRKKYSTRESDYKQDGGRDSGDSPEAGRERPAEKSS
KHHKKSKKNKKKPSRSSSSSSSAESQRGGDYPHVEPEPKDEGFNKARLGPRGDYGSPTER
GRGRGGFFTPRMRTGTQSTPPRAENTTCMMTGRARGSGWTTEDVEDGGTSCVAAGAVSLS
GRPALAYPTTTPTTTTAAPSGHMTSSRSTGGRRRASPRRRTQSRTTKTRRSLKTWKTLSS
EGAQGERNIVPAQWKCSTVSSHLGRVEMDENGLKREERTTWTCPITNTVQ
NT seq
3033 nt
NT seq
+upstream
nt +downstream
nt
atgtccaaggcaacgaagtcagcatccaagtctcggtcccactctgggtcctggtccaga
tctcgttctgtctcccgctccagaagcagctcacggtccagatctaggaaacatcgccac
aggtggctaacaacctctaggtcccgcactcgctcgcgctccagatctcattctccatcc
cacaataaccgagagcggaactacccaagggagtaccagaataataaccgcgagttccgg
ggctaccaccgaggcttccggaggccctactacttcagaggccgagggcgtggttacttc
ccacgggggcgcttccagaggggtgggggaggtggctacaacaacaactaccgccccaat
aactggcagaactacaggcagcacccccaacagcagcagcagcaacaacagcagcagcag
caacacccccacagcccgagacggggacgatcccgtacccctaaaaagcgctcgggtagc
cctcgttcccacagccactccaaggtctcggaccgctcttcctcgccccgatcccggcat
tcccgccactcctcttcctcacattcctcctctcccacacgcaggtcgggctctgggtca
gccacgcagaactctaaggatgtcaaagaggagcgctctgcctccaaggaggtccagaag
aaaggaggaggagaaggagaaggcgagcccgtggagatcacaggggtgtctgcagggcct
gatgggagcgctggtggggagaagcccaaggctaactggcagggtgtgacagatcatagc
aacagcaccagccccagggggtcaagtcctcaggtgcgctcagctgttatcattggtcag
ggcgccccagcttcgacccagtctagttcctctcctaaaagcactaatgctaatggctcc
aattccaatggtgccccctcatggcagattcagacagtgggcagttcaccttccaccaaa
agcccttctcagaaaagccccacacctgtgttctctggctttggcttcttctctaaagac
gacaacctggcaggagataaagcagctatctcctcagtgttcaaaaggttcttggaagag
cacaatcataagaaaaagcagtctgcttgggagaatggcagagagatggaaaccaatgat
ggggatgttgagcgggagaaagggaatggcatgaaggcctctgggggcatctttgacaga
gagcccgacaaaggggagaacgagaagtacaagtacatggaagactttgacgatgaccgg
aacgtgtcgttgaacagcttcttgaaagcctcccctttcttttcctgcgatggcgaggaa
gaggacgaggagacgatacccaagtcacgtcccaaggtgctccgcaaagagcgtgcccgg
gaggacgacgggtcgcccaagcccaagagcaaagtcaccctctcggccagggagctattt
gaggagcgcttcggcaagtgggaggacctggcctacttgcaggcggctgccaaagacgat
gatcttgatgccatggcggaggagatttaccgcagtcagaagcaggagaaggccatggcc
atagctgcagccttggtcaagagagaggccatagcgggcatgctcagaggcttctccccg
gagaacgtcagcaaagacaggaggatggagaaagctgcctccagcctgtcccccataccc
gcaccacggagaaactctgaccgggagatgttcatggtcaggggggaggactctccccca
aggggctctgagaaaagaggagcagagttcagcgtcagaatggattccctcagagatgac
gtggcaagctcctctggtgttatggttggtgagcgaaggttatcacgggatcttgtgcat
cctactaaaaaggagcaggagtttcgctctatcttccagcacattcaggccacacagtta
caaaggagtccctcagagctgtttgcacagcacattgtcaccattgtccactacattaaa
gcacagcactttccatccaacggaattactctaaatgagcgatttgccatgtaccaaaga
agagctgcacaaaaagaaatgatgaagccaagaaagagcccagagatacacaggagaatt
gatgtttctcccagtgcttttaagaaacactctcacctgtttgaggggatgaaaagctcc
ggggatggcagttacaaggacgaaggtaaaaaaatgaagggtgactcaatggaccttcgt
ctggatattgagcgccgtaaaaaatattccacccgggagagtgattataaacaggatggg
gggagagattcaggagactccccagaggctggcagggagaggcccgctgagaaatcctcc
aagcaccacaagaagtccaagaaaaacaagaagaagccatctcgctcctcctcttcctct
tcttctgccgaatctcaaaggggaggagactatccccacgtggagcctgagcccaaagac
gaaggctttaacaaggccaggctggggcctcggggggactatggcagtcccacggagagg
ggacgaggacgcggaggctttttcaccccaagaatgaggactgggacccagagtacaccc
ccaagagccgaaaatactacttgcatgatgacagggagggcgagaggaagtgggtggaca
accgaggacgtggaggacgggggaacttcctgcgtggcagcaggggccgtttcattatcc
ggaaggccagcgttggcttacccaacaaccacgccaacaacaacaacagcagccccaagt
ggacacatgacaagttccaggtcaacggggggaaggaggagggcgagccccaggaggagg
acacagagcaggaccacaaagaccaggagaagtctgaagacatggaaaacgctgagcagt
gagggagctcagggagagagaaacattgtaccagcacagtggaaatgttctactgtctca
agtcatctgggtcgtgttgaaatggatgaaaacggactgaaacgggaggaaaggactacc
tggacttgtccaataacaaacactgtccaataa
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