Oncorhynchus nerka (sockeye salmon): 115105527
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Entry
115105527 CDS
T07952
Name
(RefSeq) nuclear receptor corepressor 1-like isoform X1
KO
K04650
nuclear receptor co-repressor 1
Organism
one
Oncorhynchus nerka (sockeye salmon)
Pathway
one04350
TGF-beta signaling pathway
Brite
KEGG Orthology (KO) [BR:
one00001
]
09130 Environmental Information Processing
09132 Signal transduction
04350 TGF-beta signaling pathway
115105527
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
one01009
]
115105527
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
one03036
]
115105527
Protein phosphatases and associated proteins [BR:
one01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
115105527
Chromosome and associated proteins [BR:
one03036
]
Eukaryotic type
Histone modification proteins
HDAC complexes
SMART complex
115105527
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GPS2_interact
Myb_DNA-binding
Myb_DNA-bind_6
LOB
Motif
Other DBs
NCBI-GeneID:
115105527
NCBI-ProteinID:
XP_029483531
LinkDB
All DBs
Position
LG22:52004436..52103970
Genome browser
AA seq
2540 aa
AA seq
DB search
MSSSSGYPPTQGSFSSEQSRYPPHSVQYTFSTTRHQQEFTVPDYRGHLQDQQGRRRPSLL
SEFHPGTERPPERRHGYEQQFHSVTSQQQTDGHEALEAKRPRMETVSEAHFSHNALSGGI
ILPLQSHQVQDSLRASGGEVKKETQFSGMKAESQSPGGLHRVGEEQDGSPSKLSKEELIQ
SMDRVDREIAKVEQQIFKLKKKQQQLEEEAAKPVEPEKPATPPPIPQEHNKHRSIVQIIY
DENRKKAEEAHKIFEGLGPKVELPLYNQPSDTKVYHDNIKTNQVMRKKLILFFKRRNHAR
KQREQNICQRYDQLMEAWEKKVERMENNPRRKAKDSRTREYYERQFPEIRKQREQQERFQ
RVGQRGTGMSATIARSEHEISEIIDGLSEQENNEKQMRQLSVIPPMMYDTEQRRVRFINM
NGLMDDPMKMYKARQFMNVWTEHEKDIFKEKFVQHPKNFGLIASYLERKCVSDCVLYYYL
TKKNQNYKTLVRRNYGRRRGRNQQITRPSQEDKSDDKIEEEKSEKSEKKEDEQNKEEEEK
DEKEDSRDIGKDKDKCDGGEDEDGKEQSTPRGRKTANSQGRRKGRITTRSMANEAASVAT
EEPLPPASAPEPVLPAESPQPLKAEPTTQKAVREPTKTAPGGAPMDPNRGALGTAAAANI
ETGETSRWTEEEMEVAKKGLVEHGRNWPAIAKMVGTKSEAQCKNFYFNYKRRHNLDNLLQ
QHKQDIRRARGDRDPSQSESMASADDDENAEDSDGGENSSDTESAPSPSQADPSKVGGES
QRGDIAGGSESQRSDQDQASDRKGQDPSYGELRVKLEKSPEGEARDPDSQEDQDRERARA
AYEGQVHPKCEPQEVDMKPGGTEVQVKVEPDSAKEKGDNGEREEQRERHHSDNDSSATCS
ADEDVDAEPERQRIFSSMDKPSLLSPPGSVLMSTAKQAHLNMQQFQQGAAAIPPMVSHYS
NPHFSMIRYAHSERQAYGGRQQGESMSCLDQPTRQVGPFSTGGMPMGAPLSGFAMFQHQI
KAVHESAHAEDKQRQDQADPEHSRQPPNCPRFTTHSPTVLDREGKPFPYMPYDMKIALEQ
EAQSGRPGSPYRLSPRDMSKASPQPNDPNASRYSVPPVLQPAPNQVVQSLPDGVRVTFSR
HSRPANIPSPPPLIPTSKPTDKPSFIQGGSISQGTPGTYLTSHAVYGGPEVAKSSVGSIS
LGLPRQQDPTKPVSYIKQEECSPRGQSEGLLSQMQYEGVVRGGPMDGGISRGNPARGSIT
QGTPALSGSSTAADLLKGTNTKLATEELSNPEKAREHLAKGHVIYEGKSGHILSYDAIKN
PREATCSPRSGHELKRSHDMMEAARGHPGREGAPFEGLIIRALPRESPHGESKERPMMTG
SIMQGTPRTSAEAYEESMKYGKQIKRESPPIRSFEGGIGKGKPYEGVNTIKEMGRSIHEI
PRQEQPGQDPRKTPDMAANSRAAMEGSISQGHPLSQSAIKHNVKSLITSPSRLPHGPTMP
QLEAMERAKYEESKATAEQQQRARHTSVVNSATSVLRSTHQEQGKSQLSPGMYQDADARR
TPVNYSTSSMSRGSPMLGRGQEGTGKPTSHDRKSTMTPNQRDSVPAKSPVSGGDPNHPMA
SHSPFDPHHRPMAPGEPRFHLPPHLDPTLFHRAVLDPAAYMFPRQPSPTGYHNTYQLYTM
ENTRQTILNDYITSQQMQVIPRPDVARGLSPREQQQIAISYPPGARGIIDLAQMPPTILL
PHPGGTGTPTMDRITYIPGAQPPFPPRPFNPASISPVCFFVSTGHQAHLAATAAACQERE
REREREREREHREKEREKERERENREREREEYRQRERERVVAAAVANDYMRGGPGQPDRP
GSRGYLRSPSPSMRSQEAQQQRPSIFQGTNSKGVITPLMPSAAAQAGARYSTAADALAAL
VDAAASAPQMDVNKGKDSSKHDRDDDMSSSSSAARRQHEQQQQEADRRSMQSPYMSLPGG
KPHPGYAEGSGGPQGGKDKGPPTKSRIEEELRTRGKTTITAANFIDVIIKRQIASDKDSR
ERGSQSSDSSSSLSSSRYEVPSGGAIEVISPANSPAQAQQEKQQQDDRERADRDRAAQAA
TQAAGMRSFDMIRYRQSAESQQPPSSQADGGYSQSQQVPKTHRVMTLADHISHIITQDFA
RNQDPPQSSTTISSSATTTFQSAQLPVSSSGPGGRAKGHSRYSPENQTQAPSHHQRPTPS
RVSPENAPDKPRARPGKSPDRGGRGAVESYEPISPPQSYQDKQQEAREQQQQPQRREADQ
PEMRGDSRSPGSVSYLPSFFTKLENTSPMVKSKKQEIFRKLNSSGVGDSDIGNAQPGTEI
FNLPAVTSSSSVNPRNHSFSDPASNLGLEDIIRKALMGNLEERPEEHQGGPQPSCNTPSN
EAHQEANPSPSMGKQKLQSKANSRKSKSPNPGQAYAAAAQAAGGERPSSVSSVHSEGDYH
QQATGWAWEDRPSSTGSMQFPYNPLTMRMLSSTPPTSMASPSMQAQQPPPGGPLGSQQQC
VWEREPLLSEQYETLSDSDD
NT seq
7623 nt
NT seq
+upstream
nt +downstream
nt
atgtccagtagctcgggctacccccctacccaggggagcttcagcagcgagcagagccgc
tacccaccacactctgtccagtacaccttcagcaccacacgtcaccaacaggagttcacc
gtcccggactaccgaggtcacctgcaggaccagcagggtcggcgaaggccttccttgctt
tctgaattccaccctggaactgagaggcctccagagagacgtcatggctatgagcaacag
ttccacagtgtcacctcccagcagcagaccgacggacatgaggccctggaagccaagcgg
cctcgcatggagaccgtctctgaggcccacttttcccacaatgccctgtccggaggcatc
attctgcccctgcagtcccaccaggtccaggacagcctcagagcctccggaggggaggtc
aagaaggagacccagttcagtggcatgaaagccgagtctcagtccccaggagggctgcac
cgtgtgggggaggagcaggacggctcgccctccaaactgtccaaggaggaactgatccag
agcatggaccgtgtggacagagaaatcgctaaagtggagcagcagatcttcaaactgaag
aagaagcagcaacaactggaggaggaagcggcgaagccagtggagccagaaaagccggcg
acccctccccccataccacaggaacacaacaaacaccgcagcatcgtccagatcatctat
gacgagaacaggaaaaaagctgaagaggcccataagatatttgaaggtcttggtcccaag
gttgaactgcccctttataaccagccgtcggatactaaagtataccatgacaacataaag
actaatcaagtgatgaggaagaagctgattctgtttttcaagagaaggaaccatgctcgt
aaacaaagggaacagaacatctgccagcgctacgaccagctgatggaggcgtgggagaag
aaggtggagcggatggagaacaacccgcgtcgcaaggccaaggatagccgcaccagggag
tactacgagagacagttccccgaaatacgcaagcagagagagcagcaggagcgcttccag
agggttggtcagagaggaactggaatgtctgcgaccatcgccagaagcgagcatgagatt
tctgaaatcatcgacggcctttctgaacaggagaacaacgagaagcagatgagacagctg
tccgtcatcccgcccatgatgtacgacacagagcagaggcgagtcaggttcatcaacatg
aacggcctgatggacgacccaatgaagatgtacaaggctcggcagttcatgaatgtgtgg
accgaacacgagaaggatattttcaaggaaaagtttgttcagcacccaaagaattttggc
ctcattgcttcctatctagagagaaagtgtgtctccgattgtgtcctgtactactacttg
accaagaagaaccagaactacaagacgctggtgagacgcaactacggaagacggcgaggg
agaaaccagcaaataacacgaccctcgcaagaagacaagtcagacgacaaaatcgaagag
gagaaatcggagaagtcggagaaaaaagaggacgagcagaataaggaagaggaagagaaa
gatgaaaaggaggactccagggacatcggcaaagacaaagacaagtgtgacggtggggaa
gacgaggacggaaaggagcagagcacaccacgcggcagaaagaccgccaacagccagggc
cggcgcaagggaaggatcaccacgcgctccatggccaatgaggctgcctctgtggcgacc
gaggagccactaccgccggcctccgcccctgagcctgtcctgcctgcagagtctcctcag
cccctcaaagctgagcctactacacagaaggctgttagagagcccaccaaaactgcacca
ggtggagctcccatggaccctaacagaggagcactaggaactgctgccgccgcgaacatt
gaaaccggtgagacttctcgctggaccgaggaggagatggaggttgccaaaaaaggcctt
gtggagcatgggcgtaactggccagccattgccaagatggtgggcaccaagagcgaggct
cagtgcaagaacttctacttcaactacaagagacggcacaacctggacaacctgctccag
caacacaagcaggacatccggcgggcgcggggtgatcgggacccgtctcagagcgagagc
atggcctcagctgacgacgatgaaaacgcagaggatagtgacggtggagagaacagctca
gacacggagagtgccccttccccgtcccaggcagacccctccaaggtcggaggagagtcc
cagaggggagacattgctggagggtcagagagccagcggtctgatcaggaccaggccagc
gatagaaagggccaggatccgtcctacggggagctgagggtcaagctggagaagagcccg
gagggagaggccagagaccctgactctcaggaggatcaggacagggagagggcccgggcg
gcctatgagggccaggtgcaccccaagtgtgagccccaggaggtggacatgaagccaggg
ggtactgaggtacaggtgaaggtggagcctgactcggctaaggagaagggggacaatggg
gagagagaggagcagagagagaggcaccactcagacaatgactccagcgccacctgcagt
gcagatgaggatgtggacgctgagcccgagagacagaggattttttctagtatggacaag
ccttcgctgctcagccctcccggctcagtgctgatgtccacggccaagcaggcccacctc
aacatgcagcagttccagcagggtgccgctgccatcccgcccatggtcagtcactatagc
aacccacacttttctatgatcagatatgcccattcggagaggcaggcatacggaggcagg
caacagggtgaaagcatgtcttgtttagaccaacctacccgtcaagtgggtcctttcagc
actggcgggatgcccatgggagcccccctcagtggctttgccatgttccagcaccagatc
aaggcggtgcacgagtcggcccacgcggaggataaacagagacaggaccaggccgacccc
gagcacagcagacaacctcccaactgcccgcgcttcactacccacagccccactgtactg
gacagggagggtaagcccttcccctacatgccttatgatatgaagattgctctggagcag
gaggcccagtctggtcggcctggatctccctacaggctctctcccagggacatgagcaag
gcctctcctcagcccaacgaccccaacgcctcccgctacagcgtgcctccagtgctccag
ccagctcccaaccaggtggtccagagtctgcctgatggagtccgtgtgactttctccaga
cacagccgacccgccaacattccatctcctcctccactcattccaacctccaaacccaca
gacaagccttcctttatccagggcggctccatctcccagggaactcctggtacgtacctg
acatcccatgctgtctacggtggcccagaggttgcaaagagctcagtgggctccatatcc
ctgggcttgcccaggcagcaggaccccaccaaacctgtgtcctacattaagcaggaggag
tgttctccgcgtggccagtcggagggcctcctttcccagatgcagtatgagggggtagtc
agaggaggcccaatggatgggggtatcagcagaggcaacccagccagaggatcaatcaca
cagggcacgccagccctgtctgggtctagcactgcggctgacctgctgaagggcaccaac
accaagctggccacagaggaactgagcaacccagagaaggcccgggaacatctggccaag
ggacacgtcatctacgagggcaagagtggacacatcctatcctacgatgccattaagaac
ccaagagaggccacatgtagccccaggtcaggccatgagctcaaacgctcccatgatatg
atggaggccgccagaggccaccccgggagagaaggagcccccttcgaggggttgataatc
cgagccctgcccagagaaagtccccatggggagtccaaggagaggcccatgatgactgga
tccatcatgcaaggtacacccagaacctctgcagaggcctatgaggagagcatgaagtac
ggcaagcagataaagagggagagtccacccatccgctcctttgagggggggataggtaag
ggtaagccctatgagggggtgaacaccattaaggagatgggtcgctccatccatgagatc
ccccgccaggagcagcctggacaggacccccgcaagacccccgacatggctgccaacagc
cgagccgccatggagggctccatatcccagggccatcctctgagccagtcggccatcaag
cacaacgtcaagtccctaatcaccagtcccagtaggctgccccatggccccaccatgccc
cagctggaggccatggagcgggccaagtacgaggagagcaaggcgacggcggagcagcag
cagcgagcgcgccacacctctgtggtcaactcggccacctccgtgctgcgctccacccac
caggagcaaggcaagtcccagctcagccctggcatgtaccaagacgcagatgcccgcagg
accccggtcaactacagcaccagctccatgtccagaggctcgcccatgttgggccgagga
caggagggcactgggaagcctacgtcccacgataggaagagtaccatgacccccaatcag
agggacagtgttccagccaagtcccctgtgtcagggggagatcccaaccaccctatggcc
tcccacagcccctttgacccccaccaccgccccatggcccccggagagcctcgcttccac
ctgcctccacacctagaccctaccctcttccaccgggccgtcctggaccctgctgcatac
atgttcccgaggcagccgtccccgacgggctaccacaacacctaccagctgtacaccatg
gagaacacaaggcagaccatcctcaatgattatatcacctcacagcagatgcaggttata
ccacggcccgatgttgccaggggcctgtcgccacgggaacagcaacagattgccatctct
tatcctcccggagcgcgagggattattgatctagcccagatgcctccaactatcctgttg
cctcaccctgggggaacaggtactcccactatggaccgcatcacctacatccccggagct
caaccccctttccctcctaggcctttcaacccagcctccatatctccagtctgtttcttt
gtgtccacaggccaccaagcccacctcgcagctacagcagctgcctgtcaggagcgagaa
cgggagagggagcgcgaaagagaaagggagcatcgagagaaagaaagggaaaaggagcga
gaaagggagaacagggagagggaaagggaggagtacagacaacgagagcgtgagcgagtg
gtggctgcagcggttgccaatgactacatgcgtggaggtccagggcagccagatagacca
ggaagccgtggttacctgcgtagcccctccccatctatgaggtcacaggaagcccagcag
cagcgacccagcatcttccaaggaaccaacagcaagggcgtcatcacccctctcatgcca
tcagcagcagcccaggcaggagcccgttacagcactgcagccgatgcccttgctgccctg
gtggacgctgccgcatccgcccctcagatggacgtcaacaagggcaaggactcctccaag
cacgatcgagacgacgacatgtcttcatcatcctctgcggccaggcgacagcacgagcag
cagcagcaggaggcagacaggcggtccatgcagtctccctacatgtctcttccagggggg
aaaccccacccaggatatgctgaggggtctggtggtccccaggggggcaaggacaagggt
ccccccaccaagtcacgcatcgaggaggagttgaggaccagaggaaagaccaccatcacg
gccgccaacttcattgacgtcatcatcaagcgtcagatcgcctcggacaaggactcacgg
gagagaggctcccagagctccgattcctccagcagcttgtcatccagtcggtatgaggtc
cccagtggaggagccatcgaggtgatcagcccagccaactctccagcccaggcccagcag
gagaaacagcagcaggatgacagggagagggctgacagggacagggctgcacaggcagca
acacaagcagctggcatgcgttcctttgacatgatccgctaccgccagtcagcggagtcc
cagcagcccccctcctcccaggctgacggagggtactcccagtcccagcaggtccccaag
acccaccgggtcatgaccctggctgaccacatctcgcatattatcacccaggactttgcc
aggaaccaggatcctcctcagtcctccaccaccatctcctcctctgccaccaccacattc
cagagcgcccagctgccagtatctagctcgggccccgggggccgtgccaagggccacagc
cgctacagcccagagaaccagacccaggccccatcacaccatcagagacccacgcccagc
agagtgtctcctgagaacgcccctgacaagcccagagccagacctggtaaatcccctgat
cggggtggcaggggggcggtggagagttatgagcccatctcccctccccagagctaccag
gataaacaacaggaggccagagagcagcagcaacaaccccagagacgagaggctgaccag
cctgagatgaggggtgactctcgatcccctggcagtgtcagctacctgccctccttcttc
accaagctggagaacacctcccctatggtgaaatccaagaagcaggagatatttcgtaag
ttaaactcctctggtgtcggggattctgatataggaaatgcacaaccaggcacagagatc
ttcaacttgcccgctgtgaccagctcaagcagcgtgaaccccaggaaccactccttcagc
gacccggccagtaacctgggcctggaggacatcatccggaaggccctgatgggcaacctg
gaagaaaggccagaggagcaccagggagggcctcagcccagctgtaacacccccagcaac
gaggcccaccaggaggccaacccctcacctagcatgggcaagcagaaactgcagagcaaa
gccaacagccggaagtccaagtcgcccaacccaggtcaggcatacgcagcagcagcccag
gcagcaggaggggagcggccctcgtcagtctcctccgtccactcagagggagactaccac
cagcaggccacgggctgggcctgggaggaccggccctcgtccacaggctctatgcagttc
ccctataaccccctgaccatgcgcatgctgagcagcacgccccccacctccatggcctcc
ccctccatgcaggcccagcagcccccaccaggaggccctctgggttcccagcagcagtgt
gtgtgggagcgggagcccctactgtcggagcagtatgagaccttgtcagacagcgatgac
tga
DBGET
integrated database retrieval system
