Oncorhynchus nerka (sockeye salmon): 115105573
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Entry
115105573 CDS
T07952
Name
(RefSeq) LOW QUALITY PROTEIN: spectrin beta chain, non-erythrocytic 4-like
KO
K06115
spectrin beta, non-erythrocytic 1/4/5
Organism
one
Oncorhynchus nerka (sockeye salmon)
Pathway
one04517
IgSF CAM signaling
one04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
one00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04517 IgSF CAM signaling
115105573
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
115105573
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
one04812
]
115105573
Cytoskeleton proteins [BR:
one04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Cross-linking proteins
115105573
Intermediate filaments
Intermediate filament-binding proteins
115105573
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Spectrin
PH
PH_9
Motif
Other DBs
NCBI-GeneID:
115105573
NCBI-ProteinID:
XP_029483616
LinkDB
All DBs
Position
LG22:complement(54815339..54840786)
Genome browser
AA seq
1591 aa
AA seq
DB search
MLMGAGRDTARDEAQKLHRKWLKHQAFMTELARNKEWLAKIEQEGQELIDEKPELRSVVQ
QKLEEIRECWTDLESTTKAKARALFENNKPEPVVKSYSDLDHQLSGLEKQPPQLEQAHHL
PTFNEQLHKFQSQMGDLYKDVGELGSLQGVCLPQRGSLEKGREGEGGEQPAVVETRIVRL
IEPLKERRRILLASKEMHQVAQDLEEEILWIQERLPLASSKDYGNNLQSVQQHVKINQTL
QRDLQGRRARVEEVLDRAGIIASLRTPEVDFVREGAGHVRQLWEVLRLEAERRTVMLDVV
LQAQQYYSEAAKVESWLAGQKLHLISEEKGMDEASTLQLLKEHLALEAMVENYAETVGML
SQQCQRQLELAHPDSEGITKQQSHIDRLYVSLKDMVEHRKTKLEQQYWMYQLNREVEELE
KWITEREAVASSTELGQDLEDVTMLQEKFTKFCSETNSIGQQRMEQVNKMVNEMIDCGHT
DAATIAEWKEADESWADLLELMETRGQMLTASYQLHKFFTDCKEVLVQIAGKMRQLPEVR
ACQASIANPATLQRLMRSFEHALQLLVSQVRQLQENAAQLRAIYAGEKAEAIMSKEQEVM
SAWKELLVSCEASRVQVTSVTDKVQFFSVVREHLMWMEGIMGQIGGDDPRDSSSADVMMK
QHGELKAKMDGRSKTLQQCVELGKILLAAGNPAAEEIKDKLDTLLAKQKDLSERWDKHQE
KLQRKKDQFQYAQETVTAEAWLKAKEPLINSSSNSREAGGAGGEAQAQTDEVEQLILRHE
AFRKAAATWKERFSSLRQLSNAEKLREEQSSKPAPTPLSSRRMFPSSCLTPTFPLATSTL
LRQTVQLHIEPRPKQTSLGMAASASTAAQRLGSTMASYTPVMNGSSYHGLDHQSSSGGLE
SSNYPGLNHQACGGVDSSSSYLGVNHQTAPPPVDSSGYLGLNHQSSGGMVSPGYLPQNQS
SGGMGSPGYLPQNQSSGGMGSLGYLPQNQSIGGIVSPGYLAQNQHSGGMGSSGYLAQNLS
SGSMGSSGYLAQNHQSSGGMGSSGYLAQNHQSSGGMGSSGYLAQNQGSGVMGSSGFLAQN
QCSGIMGSSGYLAQNQNSGGMGSSGYLAQNLSSGGMGSSGYIAQNQGSGCMGSSGYLAQI
QGSGGMGSSSYLPQSGGVMDPKMAYAWQHLKADCMQPRINHIHKAVNPLLEASRAQREQF
GDIPMVDMIGPESGLELLHGRLQRDPRGSRSDPQMDHLRREREYKLGRQTSSEQEIQARL
NELPMIVRQERYRRRLERQSSSEQEGSGKARTPRQDDSSDMESAKEGSDKRSTEKRATTM
AEIVEQAQEREAAQARGETYRPTSSLSAPVTYERPRARDRPKPRRRPRPKELEEKRRSRS
APAQSPAQLLPPSHTAHNEGFLYRKHDFEGQQKSPSSKSWVNLYCVLSKGEIIFYKDAKS
ITTPYNEETPLDLSVCICDSTMGYKKKKNVFVIKKNDGNDYIFHAKDEEDLKAWVTNITT
SISEHEEIAKWDKPTTSSTDPDRSERKEKSEGDADARSERSEMGGEEEEERSEKGEGSEK
TGEGSEKADTSERGEMAEGGAGGSSTSGKSK
NT seq
4776 nt
NT seq
+upstream
nt +downstream
nt
atgcttatgggtgcgggacgagacacggcgcgggatgaggcccagaagcttcaccggaaa
tggctgaagcaccaggccttcatgaccgagctggcccgcaacaaagaatggctggccaag
atagagcaggagggtcaggaactgatcgatgagaagccggagctgcgttcggtggtgcag
cagaagctggaggagatccgggagtgctggacggacctggagagcaccaccaaggccaag
gcccgggctctgtttgagaacaacaagccagagccggtggtgaagagctactcagacctg
gaccaccagctctctggcctggagaaacagccccctcagctggagcaggctcaccatctg
cccaccttcaatgagcagctgcataaattccagtctcagatgggggacttgtacaaggac
gtaggggaactagggtccctccagggggtgtgcctcccccagcgaggcagcctggagaaa
ggcagggaaggagaagggggcgagcagccagctgtggtggagacccgcatcgtgcgcctc
atcgagcccctgaaggagagacgtcgcattctgctggcctccaaggagatgcatcaggtc
gcccaggacctggaggaagagatactgtggatccaggagcggcttcctctggcttcctct
aaggattacggcaacaacctgcagagtgttcagcagcatgtcaagatcaaccagacgctg
cagagggatctgcagggtcgccgggcgcgggttgaggaggtgttggaccgggcggggatc
atcgcctctctgcggacccctgaggtggactttgtgcgcgagggggcagggcacgtgcgt
cagctttgggaggtgctgaggctagaggcggagaggaggactgtgatgctggatgtggtg
ctgcaggcccagcagtattacagcgaggcggccaaagtcgagtcctggctggcaggccag
aaactgcacctcatcagcgaggagaagggtatggacgaagcaagcaccctgcagctgctg
aaggagcacctggccttggaggcgatggtggagaactacgctgagacagtgggcatgctc
tcccagcagtgtcagaggcagctggaactggcacacccagacagtgaggggatcaccaag
cagcagtcccacatagaccgtctgtacgtgtctctgaaggacatggtggagcacaggaag
accaaactggagcagcagtattggatgtaccagctcaacagagaggtggaggagttagaa
aagtggatcactgagcgggaggccgttgccagctccactgagctgggccaagacctggaa
gatgtcacgatgctacaagaaaaattcaccaagttctgctcagagaccaacagcataggc
caacagaggatggagcaggtgaataagatggtgaacgagatgatagactgcggccacacg
gacgcggccacaatcgctgagtggaaggaggctgacgagtcatgggccgacctactggag
ctcatggaaacccgaggacagatgctaacagcatcataccagctgcacaagttcttcacc
gactgcaaagaggtcttggttcagattgcggggaagatgaggcaactaccagaggtgagg
gcgtgccaagccagcatcgccaacccggccacgctgcagaggctcatgcgctcttttgag
cacgccctccagttgcttgtctcacaggtaaggcagctgcaggagaacgcggcccagctg
agggccatctacgccggggaaaaggcagaggccatcatgagcaaggaacaggaagtgatg
tcagcatggaaggagttgctggtttcctgtgaggccagtcgcgtgcaggtcacctcggtg
acagacaaggtccagttcttctcagtggtgcgtgagcatctcatgtggatggaaggcatc
atgggacagattggaggggacgaccccagggattcgtcctctgcggacgtgatgatgaaa
caacatggtgagctgaaagccaagatggacggccgcagtaagaccctacaacagtgtgtt
gagctgggaaagatcctgttggccgcaggcaacccagcagctgaggagataaaggataag
ttggacacactcctggctaagcagaaggatctctctgagagatgggacaaacaccaggaa
aagctacagcgcaagaaggatcagttccagtatgcccaggagacggtgacggcggaggcc
tggctgaaggccaaggagccgctaatcaactctagctccaactccagggaggctgggggt
gctggaggcgaggcccaggctcagactgacgaggtggagcagctcatcctccgccacgag
gccttccgtaaggctgcagctacctggaaggagcgcttcagctcactgagacagctctcc
aacgcagagaagctgagagaagaacagagcagcaagcctgccccaacgccactctccagt
cggaggatgttcccatcatcctgcctcactccgacctttccccttgctacctcaactctg
ctgaggcagacggtccagctgcatattgagcccaggcccaagcagactagtctggggatg
gctgcctctgcctccactgcagcccagaggttgggttctaccatggccagctacactcct
gtcatgaatggctccagttaccatggactggaccatcagagcagcagcggggggttggag
agttctaactaccctgggctaaaccatcaggcctgtggaggtgtggacagcagctccagt
taccttggagtgaaccatcagactgcccccccgccagtggatagttctggctaccttgga
ctgaaccatcaaagcagtgggggtatggttagtccaggctacctacctcaaaatcaaagt
agtgggggtatgggtagtccaggttacctgccgcaaaatcaaagcagtgggggtatgggt
agtctaggctacctaccgcaaaatcaaagtattgggggtatagttagtccaggctacctt
gcgcaaaatcaacacagtggtggtatgggtagctcaggctaccttgcacaaaatctaagt
agtgggagtatgggtagttcaggctacttggctcaaaaccatcaaagcagtggtggtatg
ggtagttcaggctacctggctcaaaaccatcaaagcagtggtggtatgggtagttcaggc
tacctggctcaaaaccaaggtagtggggttatgggtagttcaggcttccttgcgcaaaac
caatgtagtggaattatgggtagttcagggtaccttgcgcaaaatcaaaatagtggtggt
atgggtagctcaggctaccttgcacaaaatctaagtagtgggggtatgggtagttcaggc
tacattgcacaaaaccaaggtagtgggtgtatgggtagttcagggtaccttgcgcaaatc
caaggtagtggaggtatgggtagttctagctatctgcctcaaagtggtggggtcatggac
cccaaaatggcatatgcgtggcagcatctgaaagccgactgcatgcagcccaggatcaac
catatccacaaggctgtcaaccccctcctggaggccagcagggcgcagagggaacagttt
ggggacatccccatggtagacatgatcggaccagagtccggcctggagctcctccatggc
aggcttcaaagggacccccgcggcagccgctccgacccccagatggaccacctgcggcgg
gagagggagtacaagctgggccgccagacctccagcgaacaggagatccaggcgcggctc
aacgagctgccaatgatcgtgcgtcaggagcgctataggcgacgcctggagaggcagtcg
tccagcgagcaggagggcagtgggaaggcgaggacaccaaggcaggacgactccagcgac
atggagtcagccaaggaaggctctgacaaacgctcaacagagaagagagccaccaccatg
gctgagattgtggagcaggcccaggagagagaggcagcacaagccagaggggagacatac
cgccccaccagcagcctctcagcacccgtgacctacgagcgcccgcgcgcccgagaccgc
cccaaaccccgcaggagaccccgccccaaagagcttgaggagaagcggcgctctcgctcc
gctccagcccagagtccggcgcaactcttgccgccctcacacactgcccataacgaaggc
ttcctgtaccgcaaacacgactttgagggccagcaaaagagtcccagcagtaagtcgtgg
gtgaacttgtattgcgtgttgtcaaaaggagagatcattttctacaaggacgccaagagc
atcaccacaccttacaatgaagaaaccccactcgacctgagcgtctgtatatgtgatagc
accatgggatacaagaagaagaaaaatgtcttcgttatcaagaaaaatgatggcaatgac
tatattttccatgcaaaggatgaggaggacctgaaggcttgggtcactaacatcaccacc
agtataagtgaacacgaggagatcgccaagtgggacaaacccacgacctcgtccacagat
cccgaccgctcggagaggaaagagaagtcagagggggatgcagatgccaggtcagagaga
tctgagatgggaggagaagaggaggaagagaggtctgagaagggagaggggtccgagaag
acaggcgagggctccgagaaggcagacacgtcggagaggggtgagatggcagagggaggg
gcagggggctccagcacgtcagggaagagcaaatga
DBGET
integrated database retrieval system
