Oncorhynchus nerka (sockeye salmon): 115105586
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Entry
115105586 CDS
T07952
Symbol
igsf5
Name
(RefSeq) immunoglobulin superfamily member 5 isoform X1
KO
K06786
junctional adhesion molecule 4
Organism
one
Oncorhynchus nerka (sockeye salmon)
Pathway
one04517
IgSF CAM signaling
one04530
Tight junction
Brite
KEGG Orthology (KO) [BR:
one00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04517 IgSF CAM signaling
115105586 (igsf5)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04530 Tight junction
115105586 (igsf5)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
one04515
]
115105586 (igsf5)
Cell adhesion molecules [BR:
one04515
]
Immunoglobulin superfamily
CTX family
115105586 (igsf5)
SSDB
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Paralog
GFIT
Motif
Pfam:
C2-set_3
I-set
Ig_3
C2-set_2
C1-set
TM_ErbB1
V-set
MpPF26
SCY_4732_
Orthoreo_P10
VEGFR1-3_N_Ig-like
Ig_2
TED6
EphA2_TM
Motif
Other DBs
NCBI-GeneID:
115105586
NCBI-ProteinID:
XP_029483642
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All DBs
Position
LG22:complement(55937925..55963210)
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AA seq
350 aa
AA seq
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MASVFFTLLLLYATGVSGVPQLEPLNVTVLRGSEARFNISLSEAWYSMSWMLKSVLVLTI
NSGTGESEHNRRFSVKNYSSADIYCWEFIIRDVWRNDSGTVSCGVQEKPTQTAQLFVQES
GTVRIVGGNITVAQGHQAIVQCEASGWFPKPTVSWVVDGVMVDQNSYNSSSEALDSLYNS
ISFLTVRGVNSVQVKCLASVSALTTPLSSSIYLVVEPQDWTVLIAVVCSIGGFALLVLLI
LGIVFCCKRRKEAKSSYQKEMGRTRSQIEMSGGAVGQRQGKENPAYVIDGQTTGVTHSEF
NDSGYIQTSYTKHFEIPDLVNGNQAENGHASAYNVLAGTGVRKHRHVTIV
NT seq
1053 nt
NT seq
+upstream
nt +downstream
nt
atggccagtgttttcttcacgttgcttttactctatgcaacaggagtctcaggagtccct
cagctggagcccctgaatgtgactgtgctacggggctcagaggctcggtttaacatcagc
ctgtctgaggcctggtactccatgtcatggatgcttaaaagtgttttggtcctcaccatc
aacagtggcaccggtgagtctgagcacaaccgtcgtttctccgttaaaaactactccagc
gccgacatatactgctgggagttcatcatccgggacgtctggaggaacgactctggtacc
gtcagctgtggcgtccaggaaaagccgacccagaccgctcagctctttgtccaagagagc
ggcacagtgaggattgtgggaggtaacataacagtggcccagggccaccaggccatcgtc
caatgtgaggcctctggttggttccctaagcccacagtgagctgggtggtggatggggtc
atggtggaccagaacagctacaacagtagcagtgaggccctggacagtctgtataactcc
atcagcttcctcactgtccggggggtcaacagtgtccaagtgaagtgcctggccagcgta
tctgccctgaccaccccactgtccagctccatctacctggtggttgagccccaagactgg
actgtgctcatcgctgtcgtttgttccatcggtggcttcgctctgctggtgctgctcatc
cttggaatcgtcttctgctgcaaacgcagaaaagaagcaaaatccagctaccagaaggaa
atggggagaacgaggtcccagatcgagatgagtggtggtgcagtgggacagagacagggc
aaggaaaaccctgcatacgtgatagacggccaaacaacaggtgtcacccacagtgaattc
aacgacagtggttacatccagactagctatacaaaacattttgagattcctgatcttgtc
aacggtaaccaggcagaaaatggccatgccagtgcatacaacgtcctggctggaactggt
gtcaggaaacacagacatgttactattgtgtga
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