Oncorhynchus nerka (sockeye salmon): 115105657
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Entry
115105657 CDS
T07952
Name
(RefSeq) cohesin subunit SA-2-like
KO
K06671
cohesin complex subunit SA-1/2
Organism
one
Oncorhynchus nerka (sockeye salmon)
Pathway
one04110
Cell cycle
Brite
KEGG Orthology (KO) [BR:
one00001
]
09140 Cellular Processes
09143 Cell growth and death
04110 Cell cycle
115105657
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
one03036
]
115105657
Chromosome and associated proteins [BR:
one03036
]
Eukaryotic type
Sister chromatid cohesion proteins
Cohesin complex
115105657
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HEAT_SCC3-SA
STAG
SCD
Nup153
Motif
Other DBs
NCBI-GeneID:
115105657
NCBI-ProteinID:
XP_029483782
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All DBs
Position
LG22:complement(58185549..58200244)
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AA seq
1273 aa
AA seq
DB search
MIAAQELHTEFQFPQETDTQLSSDTDLEDPDVKNAKLGKGKGGRKGKKAPGEKGKGGGVK
GTGLGGVNGHHQENGMESMTLFEVVKMGKSATQSIVDDWIESYKSDRDIALLDLINFFIQ
CSGCKGAVSAEMFRHMQNSEIIRKMTEEFDEDSGDYPLTMAGPLWKKFKSSFCEFIGVLV
RQCQYSIIYDEYMMDTVISLLTGLSDSQVRAFRHTSTLAAMKLMTALVNVALNLSINMDN
TQRQYEAERNKVMAKRANDRLELLLQKRKELQENQDEIENMMNAIFKGVFVHRYRDAIAE
VRAICIEEIGVWMKMYSDAFLNDSYLKYVGWTMHDKQGEVRLKCLTALQGLYYNRELNTR
LELFTSRFKDRIVSMALDKEYDVAVQAIKLLTLVLHSSDEVLTAEDCESVYHLVYSAHRP
VAVAAGEFLYKKLFSHRGPEEEGMPRRGRQSLNGNLIKTTVFFFLESELHEHGAYLVDSL
WECAGELLKDWESMISLLLDEPMPGEEALTDHQETALIEIMLCAIRQACECHPPVGRGTG
KRVLTAKEKKTQLDDRTRITEIFAVALPLLLAKYSVDAEKVTNLLQLPQFFDLEIYTTGR
LEKHLESLLRQIREVVEKHTETDVLEACSMTYHALCNEEFTIFNRVDIARSQLLDELVDK
FNRLLEDFLLEGEEPDEDDAYQVLSTLKRITAFHNAHDLSKWDLFTSNYKLLNTGLQNGD
MPEQIVIHAMQCTHYIILWHLAKVSEGSSTKGNMVTLRKQMRAFCLMCQRYLTSVNTTVK
EQAFTILCDALMIFSHQIVSSGREQLEALIYTPDSPLQAELLNFILDHVFIDQDDDNNST
DGQQDDEASKIEALHKRRNLLAAYCKLIIYNVVEMNTGADIFKQYMRYYNDYGDIIKETM
SKTRQIDKIQCAKTLILSLQQLFNEMLSDLGCNFDRSSSSFCGIKELARRFSLTFGLDQL
KTREAIAMLHKDGIEFAFKEPSPQGEGNPPLNLAFLDILSEFSSKLLRQDKKTVHLYLER
FMTFQMALQREDCWLPLISYRNSLQAGGDDDTMSVISGYSSRSSSIRTKKAKPASTGKRK
LPEAEESSSCSTDAVWMNQEQNVQMPVMMPSPHLTSTVLRDPKKMRPEESYMGVYAMTSE
QQHQQLPPQQHHHQTPMDYNTQVTWMLAQRQQAEARQQQQERASMQYAKMRSHMQNAIRR
GSGLMEDDEEPIVEDVMMSSEDRLEDLNEGMDFDTMDIDLPPSKNRRERSELKPDYFDPS
SIMDDSVLNVSMF
NT seq
3822 nt
NT seq
+upstream
nt +downstream
nt
atgatagcagcacaagagttgcacacagagtttcagtttcctcaagagaccgatacacag
ttatcctctgacacagacctcgaggaccctgatgtcaagaatgcaaagcttgggaaagga
aagggtggaaggaaggggaagaaagcccctggagagaaggggaagggtggtggagtgaag
ggtactggccttggcggggtgaatggccatcaccaggagaatgggatggagagcatgacc
ctgttcgaggtggtgaagatggggaagagtgccacacagtccattgttgatgactggatt
gagtcttacaagagtgatcgagacattgcactcctggacttgatcaactttttcatccag
tgctccggttgtaaaggtgctgtcagtgcagagatgttcagacacatgcaaaactctgag
atcatcaggaagatgacagaggaatttgacgaggacagcggggactacccgttaaccatg
gcagggccactgtggaagaagttcaagtcgagcttctgtgagtttatcggggtgctggtg
cggcagtgtcagtacagcatcatctatgacgagtacatgatggacacagtcatctcgctg
ctcactggcctgtctgactcgcaggtccgagccttcagacacaccagcacactggcagcc
atgaaattgatgacagccttggtgaacgtggctctgaacctgagcatcaacatggacaac
actcagaggcagtatgaggcagagaggaacaaggtcatggccaagagggccaatgatagg
ctagagctcctgttacagaagcgtaaagagcttcaagaaaatcaagacgaaattgaaaac
atgatgaatgcgatttttaaaggcgtgtttgttcacagataccgcgatgctatagctgag
gtccgggcaatctgcattgaggagattggggtatggatgaagatgtacagcgatgctttt
ctcaatgacagttatctgaagtatgttggatggaccatgcatgacaagcaaggagaagta
cgcctcaagtgtctgactgcgctccagggcctgtactataaccgggagctcaacactcga
ctggagcttttcaccagccgcttcaaggaccgcattgtgtcgatggctctggataaggag
tatgatgttgcagtgcaagccataaaacttctgactcttgtcttgcatagcagtgatgag
gtcctgacagcagaggactgtgagagtgtctaccatctggtctactctgcccatcgacct
gtggctgtggctgcaggagagttcctctataagaagctcttcagccatcgaggtccagag
gaggaagggatgcccaggaggggtaggcagagcctcaacgggaacctcatcaagaccacc
gtcttcttcttcctggagagtgagctccatgagcacggggcctacctggtggacagcctg
tgggagtgtgcaggggagctgctcaaagactgggagagcatgatcagcttgctactggat
gagcccatgccaggggaggaagccctgacagaccaccaggagactgctctgatagagatc
atgctgtgtgccatccgccaggcctgtgagtgccaccctccagtgggcagaggcactggg
aagagggtcctgacagcgaaagaaaagaaaacccagctggatgaccggacgagaatcact
gagatctttgctgtggcgttgcctctgttgttggccaagtactctgttgatgctgagaag
gtgactaacttactgcagctgccgcagttctttgacctggaaatctacaccactggtcga
ttggaaaagcacttggagtcgttgttgcgtcagatcagggaggtggtggagaagcacaca
gagaccgacgtgctggaggcgtgctccatgacctaccacgctctctgcaacgaggagttc
accatcttcaacagggtggacatcgccaggtcccagctactggacgagttggtggacaag
ttcaacagactcctggaggacttcctgctggagggtgaggaaccagatgaggatgatgcc
taccaggtcctgtccacactaaagaggatcactgctttccacaatgcacatgacctctct
aaatgggacctgttcaccagcaactataagctattaaacacaggacttcagaatggagat
atgcctgagcagattgtaattcatgcgatgcagtgcacacactacatcattctgtggcac
ctagccaaggtctcagagggcagctccacaaaggggaacatggtcaccctgaggaagcag
atgagggccttctgtctgatgtgtcaacgctacctcaccagtgtcaacaccactgtcaaa
gagcaggccttcaccatcctgtgtgacgccctgatgatcttcagccaccagatagtgtcg
tcgggccgggagcagctggaggctctgatctacactccagactcccccctacaggcagag
ctgctcaacttcatcctggaccacgtctttatcgaccaggacgatgacaacaacagcaca
gatgggcagcaagatgatgaagccagtaaaatcgaggctttacacaagagacgtaacctg
ctggcagcgtactgcaaactgataatttacaatgtagtggagatgaacactggagctgat
atcttcaagcagtacatgaggtactacaatgactatggagatatcatcaaggaaacgatg
agtaaaacaagacaaattgacaagatccagtgtgccaagaccctcattctgagtttgcag
cagcttttcaatgagatgttatctgacctcggctgcaactttgaccgctcgtcgtcgtcc
ttctgcggcattaaagaactggcccgacgtttctcgttgacctttggcctggatcagctg
aagaccagagaggctatcgccatgttacacaaggatggaatcgagtttgccttcaaggag
cccagtccccagggagagggaaaccctcctctcaaccttgccttcctggacattctcagc
gaattttcctccaaacttctccgtcaggacaagaagactgttcacctctacctggagcgg
ttcatgaccttccagatggccctgcaacgagaggactgctggctgcccctcatctcctac
aggaactccctgcaggccggaggggacgacgacaccatgtctgtcatcagcggctacagc
agccgaagttccagcatcaggaccaagaaggccaagccagccagcaccggaaagaggaaa
ctgcctgaagcagaggagagtagcagctgcagcacagacgcagtgtggatgaaccaggag
cagaacgtgcagatgccagtgatgatgccctcgccacatctaacctccactgtgctgagg
gaccccaagaaaatgaggccagaggagagctacatgggtgtctatgctatgacatcagag
cagcagcaccaacagctgcccccccaacagcaccaccatcagacccccatggactacaat
acccaggtgacctggatgctagcccagagacagcaggcagaggcccggcagcagcagcag
gagcgagccagcatgcagtatgccaagatgaggagccacatgcagaatgcaatccgccgc
ggttcaggactcatggaggatgatgaggagccaatagtagaggatgtaatgatgtcatca
gaggaccgtttggaagatctcaacgagggcatggattttgacactatggatattgatctg
ccaccatctaaaaatcgccgagagagatcagagctgaagccagactacttcgatccttct
tcgatcatggatgattcggtcctcaatgtttcaatgttctaa
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