Oncorhynchus nerka (sockeye salmon): 115105658
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Entry
115105658 CDS
T07952
Name
(RefSeq) long-chain-fatty-acid--CoA ligase 4-like isoform X1
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
one
Oncorhynchus nerka (sockeye salmon)
Pathway
one00061
Fatty acid biosynthesis
one00071
Fatty acid degradation
one01100
Metabolic pathways
one01212
Fatty acid metabolism
one03320
PPAR signaling pathway
one04146
Peroxisome
one04216
Ferroptosis
one04920
Adipocytokine signaling pathway
Module
one_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
one00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
115105658
00071 Fatty acid degradation
115105658
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
115105658
09143 Cell growth and death
04216 Ferroptosis
115105658
09150 Organismal Systems
09152 Endocrine system
04920 Adipocytokine signaling pathway
115105658
03320 PPAR signaling pathway
115105658
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
one01004
]
115105658
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
one04147
]
115105658
Enzymes [BR:
one01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
115105658
Lipid biosynthesis proteins [BR:
one01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
115105658
Exosome [BR:
one04147
]
Exosomal proteins
Exosomal proteins of breast milk
115105658
Exosomal proteins of breast cancer cells
115105658
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C
Motif
Other DBs
NCBI-GeneID:
115105658
NCBI-ProteinID:
XP_029483783
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All DBs
Position
LG22:complement(58207437..58227972)
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AA seq
710 aa
AA seq
DB search
MRFKVDMHYIVFSPVYLLMWLYTLITFIPWYFLTDAGKKKTMAKREKAKSTTGKAEGPYR
CVENFDNLAREDFEGKDTLDKLFEHAVQRFGNTDCLGTRELLNEENETQPSGKIFKKLIL
GEYRWLSYDEVDQIISHLGSGLAALGQQPKSTIAIFCETRAEWMITAQACFRRNFPLVTL
YATLGEEAVAYGLNECGATHLITSTELLETKLKSILPEMHNLKHVIYVDNKSIRRTGYPE
GIQIHSMQAVQELGAKPDNLSIAVQRPQPTDLAVVMYTSGSTGQPKGVMIIHSNLIAGMT
GQCERIPGLGPKDTYIGYLPLAHVLEMTAEISCMTYGCRIGYSSPQTLSDQSTKIKKGSK
GDCSVLGPTLMAAVPEIMDRIYKNVMNKVQEMSYVQRTLFKLGYNYKLEQIKMGYDAPLC
NLLLFKKVKAQLGGNIRMMLSGGAPLSSATQRFMNICFCCPVGQGYGLTETCGAGTITEV
ADYSTGRVGAPLICCEVKLRDWVEGGYTSQDQPHPRGEIMIGGPNVTMGYYKSEHLNNDF
WVDEQGQRWFCTGDVGEIHPDGCLQIVDRKKDLVKLQAGEYVSLGKVESALKNCPLIENI
CAYANSDQNYVISFVVPNQKQLTILANKNGISVAWEEICNHPAMEKEVLKAIKEVATSIK
LQRFEIPVKVRLSPEPWTPETGLVTDAFKLKRKELKNHFQTDIERMYGGK
NT seq
2133 nt
NT seq
+upstream
nt +downstream
nt
atgaggttcaaagtagacatgcattacatagtgttctcgcctgtgtacctgttgatgtgg
ctgtacacgctcatcacgtttatcccatggtatttcctcactgatgctgggaagaagaaa
accatggcaaagagagagaaagccaagtccaccacaggcaaagcagagggcccctatcgt
tgtgtggagaactttgacaacctggcccgggaggactttgagggaaaggacactctagac
aagctgtttgagcatgcagtgcagcgcttcggcaacacggactgcctgggcaccagggag
ctcctaaatgaggagaacgagacgcaacccagcggcaaaatctttaagaagttgatcctg
ggggagtacaggtggctgtcctatgacgaggtggaccagatcatcagtcatctaggtagt
ggactggcagccctgggccagcagcccaagagtaccattgccatcttctgtgagacacga
gcagagtggatgatcactgcacaggcctgcttcagacgcaactttccattggtcactctg
tatgccaccctgggggaggaggcagtggcctatggcctgaatgagtgtggggccactcac
ctgatcaccagcacagagctactggagactaaactcaagagtattttgccagaaatgcat
aacctgaagcacgttatctatgtggacaacaagagcatcagaaggacgggttatccagag
ggcattcagatccacagcatgcaggcagtacaagagctgggagccaaacctgacaacttg
agtatagctgtgcagcggcctcagcccacagacctggctgtggtcatgtacaccagcggc
tccacaggacaacccaaaggagtcatgatcatccacagcaatcttattgctggcatgacg
ggccagtgtgagaggatcccaggcctggggccgaaggatacctacattggctacctgcct
ctagctcatgtgctggagatgactgctgagatctcatgtatgacgtatggctgcaggatt
ggctactcttccccacaaacactctctgaccagtcaacaaaaatcaagaaaggcagtaag
ggagactgctctgtgttggggcctactctgatggcagctgttccggaaataatggaccgc
atctacaagaatgtgatgaacaaggtgcaggagatgagctatgtgcagaggactctgttt
aaactgggctacaactacaaactggaacagatcaaaatgggctatgatgcccctctctgc
aacttgctgctgtttaagaaggtgaaggctcagctgggagggaacatcaggatgatgctg
tcaggaggggcacccttgtcctccgccacacagcgattcatgaacatctgcttctgctgc
cctgtgggacagggctacggcctcacagagacctgcggagcaggtaccatcacagaggtg
gcagactacagcactgggagagtaggagcccccctcatctgctgtgaggtcaaactacga
gactgggttgagggtggatacaccagtcaggaccagccccacccgcgtggagagatcatg
attggtgggcccaacgttaccatgggttactataagagtgagcacctgaacaatgacttc
tgggtggatgagcagggccagaggtggttctgtaccggggacgtgggggagattcaccct
gatggctgtctgcagatagtggaccgtaagaaggacctggtcaaactgcaggctggagaa
tacgtgtccttggggaaagtggagtctgctctgaaaaactgcccccttattgaaaacatt
tgtgcatatgcaaacagtgaccagaactatgtgataagctttgtggtgccgaaccagaag
cagctgacaattctggccaataagaacggcatcagtgtcgcctgggaggagatctgtaat
cacccggccatggagaaagaggtcttgaaggccatcaaagaggtggctacctcaatcaaa
ctgcagcgttttgagatcccagtgaaagtgcgtctgagcccagagccctggacccctgag
actggcctggtgacggacgcattcaaactgaaaaggaaggagctgaagaaccacttccag
actgatatcgagagaatgtacggagggaagtag
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