Oncorhynchus nerka (sockeye salmon): 115105660
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Entry
115105660 CDS
T07952
Name
(RefSeq) arf-GAP with Rho-GAP domain, ANK repeat and PH domain-containing protein 1-like isoform X1
KO
K18439
Arf-GAP with Rho-GAP domain, ANK repeat and PH domain-containing protein 1
Organism
one
Oncorhynchus nerka (sockeye salmon)
Pathway
one04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
one00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
115105660
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
one04131
]
115105660
Membrane trafficking [BR:
one04131
]
Endocytosis
Arf GTPases and associated proteins
Arf associated proteins
115105660
Endosome - Golgi transport
Arf GTPase associated proteins
115105660
Others
Rho GTPase associated proteins
Rho GTPase-activating proteins
115105660
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RhoGAP
PH
ArfGap
PH_11
PH_6
PH_3
RA
GAP1-M
Ras_bdg_2
Motif
Other DBs
NCBI-GeneID:
115105660
NCBI-ProteinID:
XP_029483793
LinkDB
All DBs
Position
LG22:58248090..58262453
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AA seq
1141 aa
AA seq
DB search
MNELFVSDVMADQEDSLRAMQNCFRSQFSMEEVECEDIEASRRTSSVDEDSIYLACTLSR
SYELGDSDLHHTPVIKMGWLDKTPPQGSLIFQKRWVMLDAQYLRYFQNEKEVYSKRIIAI
LFVTEVLNVGEQKFEVVTRNRTFLFRAENNTVREEWVSVLKETIQQRRSSMEMSLMNFGF
TSGQRDSGVSLISKQGYLEMNGLRSKVYVVICADRVFLYGNAEEHSQGVGITYIEMNVGT
VKSTDKRSFNLTTFYRTFSFLAESAQQRDQWVEALQDCVSRSLSSDVVAQKIWAVEANQR
CADCGAPHPDWASVNLCVVLCKCCAGVHRGLGQSVSKVRSLRMDEKVWTDNLIQVFLLGN
NRVNLFWAANTPPSEALQPSSDSEKRRRFVSAKYCQGKYRRYHALFGQQEALNKALCSTV
QTDDVLETLSLVFCGADVNCYTGDPELPSPVSVAQHYGQILQVEFLTHNHNTDLPGSRAG
NHTLLEAALPVSHTGYLFKTASSIRPVTECKAKGDFSRRWCSLNQGNFSYYESEKSSSQS
GGMKMSDVLCLLVNPPGKHGYAHSFELYHDSGRVYLFGEDSSDKVKGWIKAIAKALVPSA
AEDLVCWPFARVGRLSYTEGQSHHSPLLGWFSLGGSRLLLLLHGADRVENIDLRKIKELS
MEQEAGAGAVVLVDRGRSLRVEGDRRPDFQGWLSGLQQGSGRGDGPLDQQQLTYTDVPVI
VDRCMSYITQHGLKSEGIYRRCGVNSKIAALLFFLRHDARQVRLNEGERQVDDVANVLKR
FLREVGEGVFNGHQASLPWLHTTTVSKMSERVSQYQALLHSLPRVNRATLGAVINHLYCV
QCFADENQMNMHNLAIVFGPTLFQMDGTDNSAGQVVEDLIQNYQDIFNVDAEQFQRQLDM
ISHVIKAQKEHTEEGSPSPLTICGVYLERKEEGSELLVQISQEVSAEELVCKVLRRRNIP
PQQGDYWSCFLVDNNQEIERPLHYQEQALTIYFSLGKDCHLVVKKNCYMEAILTYIAGRV
DVSRNGLIKFCEEKGQRGKGTFSRRLCVLSGLSLRLYKDVKSSQPERECQIHSLKVYCGI
KRKLQPPSCWGMTVVCEKAVRDIQQWYLCCESKNELIEWLATFMSLQHDGDLWPAASRLD
S
NT seq
3426 nt
NT seq
+upstream
nt +downstream
nt
atgaatgagttattcgtctcagatgtcatggcagaccaggaggattcattgcgagctatg
cagaactgcttccgcagtcagtttagtatggaggaggttgagtgtgaagacattgaagcg
agcaggagaacatcatcagttgatgaagacagtatctatcttgcctgcacactgtcacga
tcatacgaactcggagactctgatcttcaccacactcctgttatcaagatgggctggctg
gacaagaccccacctcaggggagccttattttccagaagcgttgggtgatgttggatgca
cagtacctgcgatactttcaaaatgagaaggaggtctactcaaagcggatcatagccata
ctgtttgtcactgaagtgcttaacgttggagagcagaagtttgaggtggtgacaaggaac
aggactttcttgttccgtgctgaaaacaacactgtcagggaggaatgggtgtccgtactg
aaagaaactattcagcagcgtcgtagcagcatggagatgtcccttatgaacttcggtttt
actagtggacagcgtgatagtggagtctctctcattagtaaacaaggatacctggagatg
aatggactgcgctccaaggtctatgtagtcatctgtgctgacagggtcttcctctacggg
aacgctgaggagcacagccagggtgttggcatcacctacattgagatgaatgtgggtact
gtgaagagcacagacaaacggtccttcaacctcaccaccttctacagaacattcagtttc
ctggccgagtcggcgcagcagagggatcagtgggtggaggccctgcaggactgtgtcagt
cgctctctgtccagcgatgtggtggcccagaagatctgggctgtggaggccaaccagcgc
tgtgcagactgtggcgccccccatccagactgggcctctgtcaacctctgtgtggtcctt
tgcaagtgctgtgcaggcgtgcacaggggtctgggccagagtgtatccaaagttcgcagt
ctgagaatggatgaaaaggtgtggactgataaccttattcaggtgttcctgttaggtaac
aacagggtaaacctgttctgggcagctaacacgccaccaagcgaggcgctccaaccatca
agtgatagtgagaagcgccggcgctttgtctctgctaagtactgtcaggggaagtatcgc
cgctaccatgctctgtttggccaacaggaggccctcaacaaagctctgtgcagtactgtt
cagacggatgatgtattggagactctgtctctggtgttctgtggagcagatgtgaactgt
tatacaggtgatccagagctgcccagccctgtgtctgtggcccaacactatggacagata
ttacaggtggagttcttaactcacaaccacaacacagatctgccagggtctagggctgga
aatcacacactcctagaggctgctctccctgtgtcacacactggttatctcttcaagacc
gcttcttcaatacgcccagtaacagagtgcaaagcaaaaggagattttagccgtcgatgg
tgctctctgaaccaaggtaacttcagctactatgagagtgagaagagctccagtcagagc
ggcgggatgaagatgagtgatgtcctgtgtctgttggtcaatcccccagggaaacatggt
tatgcccattcctttgagctgtaccatgactctgggagagtctatctatttggagaagac
tcctctgacaaagtgaaagggtggatcaaggccatcgccaaggcgctggtcccctctgca
gcagaggacctggtgtgctggccctttgcgagggtgggtcggttgagctacactgagggc
cagagccaccacagccccctcctgggctggttctccctggggggctccagactgctccta
ctcctccacggagcagatcgagtggagaacatcgacctgcgcaaaataaaggagctctcc
atggagcaggaggctggtgctggtgctgtggtgctggtggacagaggcaggagcctgcgt
gtggagggggacaggaggcctgacttccagggctggctgagtgggctccaacagggctca
gggagaggagatggccccctggaccagcagcagctcacttacacagacgtccctgtcatc
gtggaccgctgcatgagctacatcacacagcatggtttgaagtcagagggcatctatcgg
aggtgtggtgtgaactccaagatcgccgccctgctgttctttctccgccatgacgcccgg
caggtccgtctgaatgaaggggagcgccaggtggatgacgtggcaaacgtcctgaaaagg
ttcctcagggaagtgggagagggggttttcaatggccatcaggcctctctgccatggctc
cacaccactactgtcagtaagatgagtgagagagtgtcccagtaccaggccctcctccac
agcctcccgcgagtcaacagagccactctgggggctgtcatcaaccacctctactgcgtc
cagtgctttgcagatgagaatcagatgaacatgcacaacctggccattgtgtttggtccc
acgctcttccagatggacggcactgataacagcgcaggacaggtggtagaggatctcatc
cagaactaccaggacatcttcaatgtggatgcagagcagtttcagagacagttggacatg
atctcgcatgtcatcaaagcacagaaggaacacacagaggagggaagcccctcacctctc
accatctgcggggtttacctggagaggaaggaggagggctctgagctgctggttcagatc
tcccaggaagtgagtgctgaagagctggtgtgtaaggtcctgagacgcaggaacatccct
ccacagcagggggactactggagctgcttcctggtcgacaacaaccaggagatagagcgt
ccattgcactatcaggagcaagcgctgactatctatttctctctgggtaaagactgtcat
ctggtggtcaagaagaactgctacatggaggccattcttacctacatagcaggcagggta
gatgtctcccgaaacggcctgatcaagttctgtgaagagaaaggtcaaaggggtaaggga
accttcagcagacgcctctgtgtgctcagtggcttgtctctaaggctgtacaaagatgtg
aagagttctcagcctgagagggagtgtcaaatccactctctgaaggtctactgtggtatc
aagaggaagttacagccaccgtcatgctgggggatgactgtagtgtgtgagaaggcagta
cgagacatacagcaatggtacctgtgctgtgaatcaaagaacgagctgatcgagtggctg
gccacttttatgagcctccagcatgatggcgatctgtggccagcagcttccaggctagat
tcctga
DBGET
integrated database retrieval system
