Oncorhynchus nerka (sockeye salmon): 115105672
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Entry
115105672 CDS
T07952
Name
(RefSeq) rho GTPase-activating protein 35-like
KO
K05732
glucocorticoid receptor DNA-binding factor 1
Organism
one
Oncorhynchus nerka (sockeye salmon)
Pathway
one04510
Focal adhesion
one04810
Regulation of actin cytoskeleton
Brite
KEGG Orthology (KO) [BR:
one00001
]
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
115105672
09142 Cell motility
04810 Regulation of actin cytoskeleton
115105672
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
one04131
]
115105672
Membrane trafficking [BR:
one04131
]
Others
Rho GTPase associated proteins
Rho GTPase-activating proteins
115105672
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RhoGAP_pG1_pG2
RhoGAP
FF_RHG35_4th
RhoGAP-FF1
Ras
Cdh1_DBD_1
FF
Motif
Other DBs
NCBI-GeneID:
115105672
NCBI-ProteinID:
XP_029483816
LinkDB
All DBs
Position
LG22:58558025..58570702
Genome browser
AA seq
1523 aa
AA seq
DB search
MAKKQDAKSPTYNLIVVGLSGTEKEKGQCGVGKSCLCNRFVRPSADDFYLDHTSVLSTSD
FGGRVVNNDHFLFWGEVGRVVEEGPECRMHVVEQTEFIDDQTFQPHRSTAMQPYIKRAAS
TKLASAEKLMYFCTDQLGLEQDFEQKQMPEGKIQADGFMLCMDVSRGMNRNFDDQLKFVT
NLYGHLSKTKKPIVLVLTKCDEGVERYIKDSHTFAITKKSLPVVETSARSNINVDLAFIA
LVQLIDKSRGKPKIIPYFEALKLQSQQIALAKDRYEWLVNRIVKNHNETWLNTSRRMHSS
SEFKEYVFLEGTAKCKKLFQQHVYRLKQEHIERRRKIYLSTLPLALSSLVPDLDEIDQLS
WSGVQKVLESKQHFAHWFVVLEDSPWEDTSHIDNMEDERIPSDLLETAPAEYIFNAHLEH
LRNECKRAEMRQEFKHKLACSPFVTPGKPWEEARSFIMNEDFYQWLEESEYLDLYNRHQK
EIIDHAKEDFQELLLEYSELFYELEVDAKPSKEKMGAIQEVLGEEQRFKTLQKLPAERDA
LVLKHIHFVYHPTKETCPSSPQCGDFKIEQLLASRFPTCYPFFNVKSHFGDIKADRINLV
ILGKDGLAREFANEIRTLCTNDDRYVLDGKMYELTLRPIEGNVRLPVNSFHTPTFTPHGC
LCLYNSKESLTYVVESIERLRESTIGRRDSHIAQLLTSLLLVTKRGVGTYADIGGETALG
LIKQGQQVARRLQCSFLDPASPGVGYGHNVNDSQINQVLRGLLDSRRSSSFSSSSPPLPP
KPPGPRDSPHQPSPEADIRIVMCLMCGDNYDVEQLLSPFLLPQHCRPTSNSGTSVILEQT
VGPHKQVIELSLLSYHASFSLRKSRLVHGYIAVYSARRKASLETLCAFLCEIQDIIPVQL
LAVGESQVELTESESAREQLVQGEELAQEIEGRFNSVVCGSGGVVGGLHRIEMFQHFLME
VVEKRNIVEATHMYDNVAEACTNDTAYSPRCSSPSPGNMFLDSDVDDVEPSPPYFDGTLT
SHSGGFNLPDLDSSDVSVISDISSFENKLNSKVPPQVRPKPTVTFDFRKVGRNPYNTDTM
GHRRSLPSAVTWVPGGDGGYDPSDYAEPMDAVSKPRPSNEEIIYSVPHDSTQGKIITIRN
ANRMHSNGNGSDSEADSSSLERCRKFSAAGVKPRLYRDRSKRLGKFSSFRTSFIGSDDEM
GALPKTKEDEFGTLKGDIINEEGEDPKKRNILKSLRRTAKKTRPKPRPSIPKPLESNYFG
VPLVNVVFPDRPIPLFIDKCVHFIETTGLNTEGLYRVSGNKCEMESMQRQFDQDHGLDLV
EKDFAINTVAGALKAFFSELPEPLVPCILQVELLEAFKINDREQRLYTMKDVLRKFPREN
YDVFRFVMSHLHKVSQLSRQNLMTSENLSICFWPTLMRPDFTTMDALTATRTYQTIIETF
IHQCAFFFYNQPLLDSPTGLAGLPASPTTTLTGGSTYSCYRSSPPPTTTQFSPLQQSPPT
TPQSPLQSLHQHPHCAPTEQETL
NT seq
4572 nt
NT seq
+upstream
nt +downstream
nt
atggcgaaaaagcaggatgcgaagtcacccacatacaaccttattgttgtgggtttgtca
gggacggagaaagagaagggccagtgtggagtgggcaagtcctgcctgtgcaaccgcttt
gtgcgccccagtgctgatgacttctatctggaccacacgtcagtgctgagcaccagcgac
tttgggggcagagtggttaacaatgaccacttcctgttctggggggaggtggggcgggtg
gtggaggaggggccggagtgcaggatgcatgtggtggagcagaccgagttcattgatgac
cagacgttccagccacaccgcagcactgctatgcagccctacatcaagagggcggcctcc
accaagctggcctctgcagagaagcttatgtacttctgcacggaccagctggggctggag
caggactttgagcagaagcagatgcctgagggcaagatacaggctgacgggttcatgctc
tgtatggatgtcagtagggggatgaaccgcaactttgacgaccagttgaagtttgtcaca
aacctttatggtcatctgagcaaaacaaagaagcccattgtgctggtcttaaccaagtgt
gatgagggggttgaacgctacatcaaagattctcacacctttgccatcactaaaaagagt
cttccagtagtggagacatctgcacgctctaacatcaatgttgacctagccttcattgct
ttggtgcaactcattgataagagcaggggcaagcccaagatcattccttacttcgaagcc
ctcaagctccagagtcagcagatagccctggctaaagaccgatacgaatggctagtcaac
cgcatagtgaagaaccacaacgagacctggcttaacaccagccgacgcatgcacagctcc
tcagagttcaaggaatacgtctttctagagggtacagcaaaatgcaagaagctcttccag
cagcatgtgtaccgtctgaaacaggagcacattgagagacgtcggaaaatctatctgagc
actcttcctctagcacttagctccctggtgcctgacctggatgagatcgaccagctgagc
tggtctggggttcagaaggtcctggagtccaagcagcactttgcccattggtttgtggtt
ttggaggactctccatgggaggacacgtctcacatagataacatggaggatgagcgcatc
ccctcagacctgttggagacggccccagccgagtacattttcaacgcccacctggagcac
ctgaggaatgagtgcaagcgggccgagatgaggcaggagttcaagcacaagttggcctgt
tctccctttgtcacgcctggcaagccctgggaagaggcccgcagcttcatcatgaacgaa
gacttctaccaatggttggaggaatcagagtacctggacctttacaaccgccaccagaaa
gagataatcgaccacgctaaagaggacttccaggagctgctgctggagtactctgagctc
ttctatgagctggaggtggatgccaagcccagcaaggagaagatgggggccatccaggag
gttctaggggaggagcagaggttcaagaccctgcagaagcttccagctgagagagatgct
ctggtgttgaagcatatccactttgtctaccacccaaccaaggagacctgtcccagcagc
ccacagtgtggagatttcaagatagagcagctcctggcctcacgtttcccaacatgctac
ccattcttcaatgtgaagtcccattttggggatattaaagctgaccgaatcaaccttgtg
atattgggcaaagacggactggccagggagtttgccaatgagatcaggactctgtgtacc
aatgacgaccggtatgtgctggatgggaaaatgtatgagctgaccctgcgacccatcgag
ggaaacgtacgacttcctgtaaattcctttcacactcccactttcacaccccatggatgc
ctgtgtctgtacaactcaaaagagtccctaacttacgtcgtagaaagcattgaaaggttg
cgggagtcaactataggtagaagggatagccatatagctcagcttttaacatctctgctc
ttggttactaaaaggggagtagggacatatgcagatattgggggagaaactgccttaggc
ctaataaaacagggacagcaggtagcaaggagactgcagtgtagcttcctagacccagcc
tctcctggtgtgggctatgggcacaatgtgaatgacagtcagatcaatcaagtattgagg
ggtctcctggactctaggaggagctcatcttttagtagcagctccccacctctgccccct
aaacctccaggcccaagagactctcctcaccagcccagcccagaggcagacatccgcatc
gtcatgtgcttgatgtgtggagacaattatgacgtggaacagctcctctctcccttcctc
ctgcctcagcactgcaggccaacatccaatagtgggacctcagtcatactggagcagaca
gtggggcctcacaaacaggtgattgagctctcccttctttcctaccacgcctccttctcc
ctgcggaagagcagattagtgcatggctacattgctgtgtactcagcccgccgcaaggcc
tccctggagactctatgtgccttcctgtgtgagatccaggacatcatccctgttcaactg
ctggcagtaggggagagccaggtggagctcacagaaagtgagtctgccagagagcagcta
gtccagggagaggagctggcccaagagatagaaggcaggttcaacagtgtggtgtgtggg
tctggaggggtggtgggcggcctgcacaggatagagatgttccagcacttcctgatggag
gtggtggagaaacgcaacattgtggaggcaacacacatgtatgataacgtggctgaggcc
tgcactaacgacactgcctactcccctcgctgtagctcacccagccctggcaacatgttc
ctagactctgatgtggatgacgtggagccctccccaccctacttcgatggcacactcacc
tcccatagtgggggcttcaacctgcctgacctggactccagcgatgtctctgtcatctct
gacatcagctcctttgagaacaaactcaacagcaaggtccctccccaggtgaggcccaag
cccactgtgacctttgacttccggaaggtgggccgaaacccctacaacacggataccatg
ggccaccgtcgctccctgccctctgctgtgacatgggtaccaggtggggacggaggttac
gacccctcagactatgcagagcctatggatgctgtgtccaagccccggcccagcaatgag
gagatcatctactctgtgccccatgacagcacgcagggcaagataatcaccatccgcaac
gccaacaggatgcactcaaatgggaacggctcggacagtgaggcagacagcagttccctg
gagcgctgcaggaagttctcggcggcgggggtgaagccccgactgtaccgtgaccgctcc
aaacgcctgggtaagttcagcagctttcgcactagcttcattggcagcgacgacgagatg
ggggccctgccaaagaccaaggaggatgagttcggaaccctgaaaggagacatcatcaat
gaggagggagaggaccccaagaagaggaacattctgaaaagcctacggcgaactgccaag
aaaaccagaccaaagcctcggccctctattcccaagcccctggagagcaactacttcggg
gtacccctggtcaatgtggtgttcccagacagacctatcccactttttattgacaagtgt
gtccacttcattgagaccacaggcctcaacacagaggggctgtacagggtgagcgggaac
aagtgtgagatggagagcatgcagaggcagtttgaccaggaccatgggctggacctagtg
gagaaggactttgccatcaacacggtggctggggctctgaaggccttcttctctgagctg
ccggagccgttggtgccatgcattctgcaggtggagctgctcgaggccttcaaaatcaat
gacagggaacaaaggctctacaccatgaaggatgtgctgaggaagttccccagggagaac
tatgacgttttcagatttgtcatgagccacttacacaaggtgagccagctgagcagacag
aacctgatgaccagtgagaatctgtccatctgtttctggcccactctgatgcggccagac
ttcaccaccatggacgccctgacggccacgcggacctaccagacaatcatcgagaccttc
atccaccagtgtgctttcttcttctacaaccagcccctcctggactcccccactggcctg
gctggcctccctgcctcccccaccaccaccctcaccggtggctctacctattcctgctac
cgctcctcccctccccccaccaccacgcaattcagccccctgcagcagtcgccccccacc
accccccagtcacccctgcagtccctccaccaacacccccactgcgcccccaccgagcaa
gagacactgtaa
DBGET
integrated database retrieval system
