Oncorhynchus nerka (sockeye salmon): 115105701
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Entry
115105701 CDS
T07952
Name
(RefSeq) rab GTPase-binding effector protein 1-like
KO
K12480
Rab GTPase-binding effector protein 1
Organism
one
Oncorhynchus nerka (sockeye salmon)
Pathway
one04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
one00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
115105701
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
one04131
]
115105701
Membrane trafficking [BR:
one04131
]
Endocytosis
Rab GTPases and associated proteins
Rab associated proteins
115105701
Protein recycling
Rab4 associated proteins
115105701
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rabaptin
Rab5-bind
KIF21A_4th
Fez1
Fib_succ_major
CrmD_SECRET
4HB_RdRP3_N
Motif
Other DBs
NCBI-GeneID:
115105701
NCBI-ProteinID:
XP_029483865
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All DBs
Position
LG22:complement(59647708..59667571)
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AA seq
855 aa
AA seq
DB search
MADQASGSARQPQHDAVLQQRVAALEQERADFVKRKQQLESEFNQKRAKFKELYLSKEEE
LKCQAASLEGAQSELSRVQAQLEQAQADMENIKAVATVSESTKQEAIDQVKGQWQEEVAS
LQAIMKDTVREYEVQFHQRLEQERAQWNQYREVVEREMGELRHRLSEGGQEEENLENDMK
KAQEDAEKLRSVVMPMEQEIAALKVKLTVAEDRVKELEASKVKELNHVLEAEKSCRTDLE
MYVAVLNTQKSVLQEDAEKLRKELHEVCHLLELERQQHNQLKHTWQRANDQFLESQRLLM
RDMQRIENVLSSEQLRQVEEIKKRDQEEDEKERISQAKEQNEEDRTETEPLEDSFLGLSI
EEPHSAHGSMHSLDSDLVAGGPMDLYKDGLRRVQSTDSLGSSPGLQGLGGYNHKAKSASH
LDESDFGPLVGADCGAPEGLAGFGDTLSVSSIQLTAGHFLLTKDQEKAIKAMTPEQEETA
SLMSSISHAHDTTFLTPSGYRLVSDQEWNLLQQEVKNAGRKLGRRCDMCSNYEKQLQVIQ
GQEAETRDQVKKLQVMLRQANDQLERTMSEKQELEDSVKQGNEETTAKVAALMHRVQESE
SLLKTLQEAFSQAKRNTQEQMAVLMQSREQVAEELSRLQRDNDSLTGKHRLHLSLQQQED
FKLPTMVQELQALVLQLREDIVVVRTAADHLEEKLKAEILFLKEQLQAEQCLKENLEDTL
QLEIDGCKEEIASLSSLKTELERVKAEKEQLESSLAEKRKTLASVQGLKSSLEEQLRELT
TTKTALEAQALDEKDKALRLQTELDVSEQVQRDFVKLSQTLQVQLERIRQADSLDRIRAI
LNNTNLTDISQLPET
NT seq
2568 nt
NT seq
+upstream
nt +downstream
nt
atggccgaccaggcctcgggatccgcccggcagccccagcatgacgcggtgctccagcag
cgagtggcagccctggagcaggagagagctgactttgtcaagcgcaaacagcaactggag
tctgagttcaaccagaaacgggccaagttcaaagagctctacctgtccaaagaagaggaa
ctgaagtgccaggcagcgtctctggagggggcccagtcggagctgagtcgtgtacaggcc
cagctggaacaggcccaagctgacatggagaacatcaaggcggtggccactgtgtcagag
agcaccaagcaggaggccattgaccaggtcaagggacagtggcaggaggaggtggcctcc
ctacaggccatcatgaaagacacagtgcgtgagtatgaggtgcagttccaccagcgcctt
gagcaggagcgtgcccaatggaaccagtacagggaggtggtggagagggagatgggcgag
ctgagacaccgcctctctgagggcggccaggaggaggagaacctggagaacgacatgaag
aaggcccaggaagatgcagagaagctacggtcagtggtaatgcctatggagcaggagata
gcagctctgaaagtcaaactgactgtggcagaggacagggtgaaggagctggaggcctcg
aaggtaaaggagctcaatcatgtcctggaagcagagaaatcctgccgcacagacctggag
atgtacgtggcggtgctcaacactcagaagtcagtccttcaggaggacgcagagaaacta
cgaaaagagctccacgaagtgtgtcacctcttggagctggagcggcagcagcacaaccag
ctgaagcacacttggcagcgggccaacgaccagttcctggagtcacagaggctgctgatg
agggacatgcagaggatcgagaatgtgctctcttctgagcagctccggcaggtggaagag
attaagaagagggaccaggaggaggatgagaaggaaaggatcagccaggccaaggagcag
aacgaggaagacaggacagaaaccgaacctttagaagactcattccttgggctcagtatt
gaagagccccacagtgcccacggctccatgcactccttagactctgacctggtggcaggg
ggccctatggacctctacaaagacggccttcggagggtccagtccacagacagcctgggt
tcctctcctggtctccagggcctgggtggctacaaccataaggccaagtcggccagccac
ctagatgagtccgacttcggacccctggtgggggcggactgcggggcccctgagggcctg
gcgggctttggggacacgctatcggtcagctccatccagctgacggccggccacttccta
ctcacgaaggaccaggagaaggctataaaggccatgacgccggagcaggaggagacggcc
tcgctgatgtccagcatctcccacgcccacgacaccaccttcctgaccccgtcaggctac
cgcctggtcagtgaccaggagtggaacctgcttcagcaagaggtgaagaacgcaggaagg
aagttgggacggcggtgtgacatgtgctctaactacgaaaaacagctgcaggtcatccag
ggccaggaggcagagacacgcgatcaagtaaagaagctccaggtgatgctgcggcaggcc
aacgaccagctagagagaaccatgagtgaaaaacaggagttggaggactctgtgaaacag
ggcaacgaggaaaccactgcaaaggtcgctgctctcatgcacagagtccaggagtccgag
tcactgcttaaaacactacaagaggccttcagtcaggccaagaggaacacacaggaacag
atggctgtgctgatgcagtccagggagcaggttgcggaggaactgagcagactgcagagg
gacaacgacagcctaacaggcaaacaccgactccacttatctctccagcagcaggaggac
ttcaaactacccaccatggtgcaagaactacaagccctggtgctgcagttgcgggaggac
atagttgtggtgcgcacggctgcagaccacctggaagagaagctgaaggcggagatcctg
ttcctgaaggagcagctccaggcagagcagtgcctcaaagagaacctggaggacacacta
cagctagagatagatggctgcaaggaggagatagcgtcattatccagtctgaaaactgag
ctggagcgagtgaaagctgagaaagaacagctggagagcagcctggcagaaaagaggaag
acattagcgagtgtccagggtctgaagagcagtctggaggagcagctcagagagctcacc
acaaccaagacggccctggaggctcaggcattggatgagaaggacaaagccctgcggttg
cagacggagctggatgttagtgagcaggtgcagagggactttgtcaagctctcccagaca
ctccaggtccagttggagcggatcagacaggctgactctttagaccgtatccgagccatc
ctcaacaacaccaacttgactgacatcagccagctcccagagacatga
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