Oncorhynchus nerka (sockeye salmon): 115105705
Help
Entry
115105705 CDS
T07952
Name
(RefSeq) nectin-3-like protein isoform X1
KO
K06592
poliovirus receptor-related protein 3
Organism
one
Oncorhynchus nerka (sockeye salmon)
Pathway
one04514
Cell adhesion molecule (CAM) interaction
one04517
IgSF CAM signaling
one04520
Adherens junction
Brite
KEGG Orthology (KO) [BR:
one00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecule (CAM) interaction
115105705
04517 IgSF CAM signaling
115105705
09140 Cellular Processes
09144 Cellular community - eukaryotes
04520 Adherens junction
115105705
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
one04515
]
115105705
04090 CD molecules [BR:
one04090
]
115105705
Cell adhesion molecules [BR:
one04515
]
Immunoglobulin superfamily
Nectin family
115105705
CD molecules [BR:
one04090
]
Proteins
115105705
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
V-set
Ig_3
ig
C2-set_2
I-set
Ig_2
Ig_PVRIG
Keratin_assoc
TM_ErbB1
Y2009_N
Motif
Other DBs
NCBI-GeneID:
115105705
NCBI-ProteinID:
XP_029483871
LinkDB
All DBs
Position
LG22:59828207..59925381
Genome browser
AA seq
566 aa
AA seq
DB search
MFLPCLRNYPLHKRQHAVFIFLLYSLTGVGGSQVLVPQKVSAVLGKNVTLGCSVEVEANL
SFTQSSWERRLPTGSVTVAVYNPVFGISIPPDYVRRLSFRSPSSHDATIVLEDVGFTDIG
VYTCKVATFPLGNTQASTTVSVLVEPKVYVSAGSVALIDEGNETVVATCIAERALPPAEV
SWETDLFGHSEVTMQDEANGTTSTQVHYLWQPTRHVQGQALTCVVRHPALHTDFRIPYQL
NVEYAPDIVVVGYDGDWHVGRESVLLTCKAKANPPAHHFRWIRLDGDMPEGVEILNSTLL
FLRPLQRNDSGVYRCEVANAINLRSRDLRIRIQDPPTTSMPSTTPAPVLTGSASSSTSVG
DKQRVLFTSPTLAALPPANQLGTIVGGAVGGALFLLLLLVLGGVCYLRQRQTFRGDYYTK
QYLGPSDMQKAPPQHELHPSKPANNVFVDKDREEWGDRERNHERDRERLHLHPTSTTILN
SHNHREPERQSNGRTRATRNGEHHDNDHLRSYPSPHQSSHARYTAPPHPLSNGSPYLSDD
CYDSGAEGDYVSHMDGSVISRREWYV
NT seq
1701 nt
NT seq
+upstream
nt +downstream
nt
atgttcctgccttgcctcaggaattacccgcttcataagagacagcatgctgtatttatt
tttcttctgtacagcttgacaggtgtggggggcagtcaggtgttggtgccccagaaggtg
agtgctgtattggggaagaacgtgacgttgggctgtagtgtggaggtggaggccaacctg
agttttacccagagttcctgggagcgccggctgcccacaggctcggtgacggtggcggtg
tacaatcccgtgttcggtatctccatccccccggactacgttcgccgcctgtccttccgc
tcaccctcctcccatgacgccaccatcgtactggaggacgtgggcttcacagacattgga
gtgtacacctgcaaggtggccaccttccccctgggcaacacacaggcctccaccactgtc
agtgtgcttgtggagcccaaggtgtatgtgtcggctggctcggtggctctgatcgatgag
ggcaatgagacggtggtggctacctgcatcgctgagcgggccctcccccctgccgaagtc
tcctgggagacggacctgtttggccattcagaggtgacgatgcaggacgaggccaacggc
accaccagcacccaagtgcactacctgtggcagcccacccgccacgtccagggtcaagcc
ctcacctgtgtggtgcgccatcctgccctgcacacggactttaggatcccctaccagctc
aatgtggagtatgccccagacattgtggtggtaggttatgatggtgactggcacgtgggc
cgcgagagcgtcctgctgacctgcaaagccaaggcaaacccaccagcccaccacttcaga
tggatcagactggacggggacatgccagagggtgtggagatactgaacagcacgttgcta
tttctgaggcccctccaaaggaatgactctggagtctacaggtgtgaggttgccaatgcc
atcaacctacgcagcagggacctgcggatacgcatacaagatcctcccaccacctccatg
ccctccaccacccctgcgcctgtcctaactggctctgcctcctcctccacctctgtggga
gacaagcaacgggtcctcttcacctcccccaccctggcagccctgccccctgccaaccaa
ctgggcaccatcgtgggcggagctgtgggcggagccttgttcctcctgctgctgctagtg
ctgggcggggtctgttacctccgacaacgacagaccttccgcggggactactacaccaag
cagtacctagggccttcagacatgcagaaggctcctccacagcacgagctccacccctcc
aagcctgccaataacgtttttgtagacaaggaccgcgaggagtggggcgaccgcgaacgc
aaccacgagcgggaccgcgagcgcctccacctgcatccaacatcaacaaccatcctgaac
agccacaaccacagagagccagagcgccagtccaatggccgcacgagggcgacgagaaat
ggagaacaccatgacaacgaccacctgcgtagctaccccagcccccaccagagtagccat
gccagatacactgccccaccacacccgctgagcaacggttccccctacttgtcggatgac
tgctatgacagtggggccgaaggggactatgtctctcatatggatggctccgtgatctca
cgcagggagtggtacgtctga
DBGET
integrated database retrieval system
