KEGG   Oncorhynchus nerka (sockeye salmon): 115105716
Entry
115105716         CDS       T07952                                 
Name
(RefSeq) nuclear pore glycoprotein p62-like isoform X1
  KO
K14306  nuclear pore complex protein Nup62
Organism
one  Oncorhynchus nerka (sockeye salmon)
Pathway
one03013  Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:one00001]
 09120 Genetic Information Processing
  09122 Translation
   03013 Nucleocytoplasmic transport
    115105716
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:one03019]
    115105716
Messenger RNA biogenesis [BR:one03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    Nuclear pore complex
     115105716
SSDB
Motif
Pfam: Nsp1_C
Other DBs
NCBI-GeneID: 115105716
NCBI-ProteinID: XP_029483891
LinkDB
Position
LG22:60160102..60169040
AA seq 578 aa
MSGGFNFGQASSTGFSFGAPKTTAATAPATGFGMPSAAAPGGGFSFGTPSTPQAPVAAPQ
SSGLFAMPTQGSTNPTGGFSFGTPAQSSTPAGGGFSFGTPIAKLNLGTPVASQPALTGLT
MGMATPSGTGFGLGGGLATQTTAAPAGGGFSFGTAGGLGAPVAQTQPQTQPAAAGGLSLG
TPAEATQIMGGGFSFGAAKVQATTAPAPTVTVGGGFSFGNSTPASLSLGTQPTSLTLNSV
ASTAVPTTTQVGGFAFGVKPSATPAPTATAPATQASLGSSLFAVPASTAAPASAAITGFL
GAAPTSAAPAATSTAGSTLGFMLKPLGAVTATTTVPVGTAAPTTTTGFSLAMKPAGSIGI
GVTAPITGVATTIATVTASAPPVMSYIQLEGLINKWSLELEDQERHFLQQATQVNAWDRT
LVENGEKITSLHREMEKVKLDQRRLDQELDFILSQQKELEDLLSPLEESVKEQSGTIYMQ
NADEERERTYKLAENVDAQLKRMSQDLKEIIEHLNTSSGPADNSDPLQQICKILNAHMDS
LQWIDQNSVLLQRRVEDVSKLCDNRRKEQEKTFRIAFH
NT seq 1737 nt   +upstreamnt  +downstreamnt
atgagtggaggattcaactttggacaagcgtccagtactggattcagctttggagctccc
aaaaccacagctgcaactgccccagccacaggctttgggatgcctagtgctgcagctcca
ggtggtggcttctcgttcggaacccccagcactccgcaggccccagtagctgccccccag
agctctgggctgtttgctatgcccacacagggtagcacaaacccaactggggggttcagc
tttgggacccctgcacagagcagtactcctgcaggaggaggcttctcttttgggactccc
attgctaaactcaatctgggtacaccagtcgcctctcaacctgcactgactgggctaact
atggggatggcaaccccctctgggacaggctttgggcttggtgggggtctcgccacacaa
accactgctgcccctgcaggaggggggttcagctttgggaccgcaggggggcttggagcc
cctgttgcccaaactcagccccagacccaacctgctgcagctggtggactctctttagga
actcctgctgaagccacccaaattatgggaggtgggtttagttttggtgcagccaaggtc
caggccaccacagccccagcccctactgtaaccgtaggagggggcttctcatttggaaac
agcacacctgccagcctctccctggggacccagcccacaagtctgactctgaactctgtg
gcctcaacagctgtaccaaccacaacccaggttggaggatttgcttttggcgtcaaacct
tctgctactccagccccgactgcaactgccccggctacccaagcctcattaggttcttct
ctttttgctgtaccagcatcaacagcagctcctgcttcagcagcaatcacaggatttttg
ggcgctgcccctacctccgctgccccggctgccacctcaacagcgggaagtaccctgggc
ttcatgctcaaacccctgggagcagtcactgccacaactactgtcccagttggcacagct
gcccctaccacaacaacaggtttctcactggctatgaaacctgcgggctccattggcatt
ggtgtaacggcccccatcactggcgtagccacaaccattgctactgttacagcaagtgct
cctccagtgatgtcatatatccaactagagggtctcattaacaagtggagtcttgagctg
gaggaccaggagaggcatttcttacagcaagccacccaggtcaacgcctgggaccgcacg
ctggtggagaacggagagaagatcacatcactgcacagggagatggagaaagtgaaattg
gaccaaagaaggctggaccaggaactggacttcatcctgtcacaacagaaggagctggag
gacctgctgtccccactggaggagtctgtcaaagaacagagtggaaccatctacatgcag
aacgcagacgaggaacgcgagaggacgtacaagcttgcagagaacgtggacgcccagctg
aagaggatgtcccaagatctaaaggagatcattgaacacctgaatacatccagcgggcca
gctgataacagtgacccgcttcagcagatctgtaaaattctcaatgcccacatggactct
cttcaatggattgaccagaactcggtgcttctacagagaagggtggaggatgtgtccaaa
ctctgtgacaaccgacgcaaagagcaggagaagacttttcgcatagcatttcattga

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