Oncorhynchus nerka (sockeye salmon): 115105716
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Entry
115105716 CDS
T07952
Name
(RefSeq) nuclear pore glycoprotein p62-like isoform X1
KO
K14306
nuclear pore complex protein Nup62
Organism
one
Oncorhynchus nerka (sockeye salmon)
Pathway
one03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
one00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
115105716
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
one03019
]
115105716
Messenger RNA biogenesis [BR:
one03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
115105716
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nsp1_C
Motif
Other DBs
NCBI-GeneID:
115105716
NCBI-ProteinID:
XP_029483891
LinkDB
All DBs
Position
LG22:60160102..60169040
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AA seq
578 aa
AA seq
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MSGGFNFGQASSTGFSFGAPKTTAATAPATGFGMPSAAAPGGGFSFGTPSTPQAPVAAPQ
SSGLFAMPTQGSTNPTGGFSFGTPAQSSTPAGGGFSFGTPIAKLNLGTPVASQPALTGLT
MGMATPSGTGFGLGGGLATQTTAAPAGGGFSFGTAGGLGAPVAQTQPQTQPAAAGGLSLG
TPAEATQIMGGGFSFGAAKVQATTAPAPTVTVGGGFSFGNSTPASLSLGTQPTSLTLNSV
ASTAVPTTTQVGGFAFGVKPSATPAPTATAPATQASLGSSLFAVPASTAAPASAAITGFL
GAAPTSAAPAATSTAGSTLGFMLKPLGAVTATTTVPVGTAAPTTTTGFSLAMKPAGSIGI
GVTAPITGVATTIATVTASAPPVMSYIQLEGLINKWSLELEDQERHFLQQATQVNAWDRT
LVENGEKITSLHREMEKVKLDQRRLDQELDFILSQQKELEDLLSPLEESVKEQSGTIYMQ
NADEERERTYKLAENVDAQLKRMSQDLKEIIEHLNTSSGPADNSDPLQQICKILNAHMDS
LQWIDQNSVLLQRRVEDVSKLCDNRRKEQEKTFRIAFH
NT seq
1737 nt
NT seq
+upstream
nt +downstream
nt
atgagtggaggattcaactttggacaagcgtccagtactggattcagctttggagctccc
aaaaccacagctgcaactgccccagccacaggctttgggatgcctagtgctgcagctcca
ggtggtggcttctcgttcggaacccccagcactccgcaggccccagtagctgccccccag
agctctgggctgtttgctatgcccacacagggtagcacaaacccaactggggggttcagc
tttgggacccctgcacagagcagtactcctgcaggaggaggcttctcttttgggactccc
attgctaaactcaatctgggtacaccagtcgcctctcaacctgcactgactgggctaact
atggggatggcaaccccctctgggacaggctttgggcttggtgggggtctcgccacacaa
accactgctgcccctgcaggaggggggttcagctttgggaccgcaggggggcttggagcc
cctgttgcccaaactcagccccagacccaacctgctgcagctggtggactctctttagga
actcctgctgaagccacccaaattatgggaggtgggtttagttttggtgcagccaaggtc
caggccaccacagccccagcccctactgtaaccgtaggagggggcttctcatttggaaac
agcacacctgccagcctctccctggggacccagcccacaagtctgactctgaactctgtg
gcctcaacagctgtaccaaccacaacccaggttggaggatttgcttttggcgtcaaacct
tctgctactccagccccgactgcaactgccccggctacccaagcctcattaggttcttct
ctttttgctgtaccagcatcaacagcagctcctgcttcagcagcaatcacaggatttttg
ggcgctgcccctacctccgctgccccggctgccacctcaacagcgggaagtaccctgggc
ttcatgctcaaacccctgggagcagtcactgccacaactactgtcccagttggcacagct
gcccctaccacaacaacaggtttctcactggctatgaaacctgcgggctccattggcatt
ggtgtaacggcccccatcactggcgtagccacaaccattgctactgttacagcaagtgct
cctccagtgatgtcatatatccaactagagggtctcattaacaagtggagtcttgagctg
gaggaccaggagaggcatttcttacagcaagccacccaggtcaacgcctgggaccgcacg
ctggtggagaacggagagaagatcacatcactgcacagggagatggagaaagtgaaattg
gaccaaagaaggctggaccaggaactggacttcatcctgtcacaacagaaggagctggag
gacctgctgtccccactggaggagtctgtcaaagaacagagtggaaccatctacatgcag
aacgcagacgaggaacgcgagaggacgtacaagcttgcagagaacgtggacgcccagctg
aagaggatgtcccaagatctaaaggagatcattgaacacctgaatacatccagcgggcca
gctgataacagtgacccgcttcagcagatctgtaaaattctcaatgcccacatggactct
cttcaatggattgaccagaactcggtgcttctacagagaagggtggaggatgtgtccaaa
ctctgtgacaaccgacgcaaagagcaggagaagacttttcgcatagcatttcattga
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