Oncorhynchus nerka (sockeye salmon): 115105755
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Entry
115105755 CDS
T07952
Name
(RefSeq) neuronal PAS domain-containing protein 2-like
KO
K09026
neuronal PAS domain-containing protein 2
Organism
one
Oncorhynchus nerka (sockeye salmon)
Brite
KEGG Orthology (KO) [BR:
one00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
one03000
]
115105755
Transcription factors [BR:
one03000
]
Eukaryotic type
Basic helix-loop-helix (bHLH)
Factors with PAS domain
115105755
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PAS_11
PAS_3
HLH
PAS
PAS_9
TED_2
Motif
Other DBs
NCBI-GeneID:
115105755
NCBI-ProteinID:
XP_029483958
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Position
LG22:complement(61797684..61851591)
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AA seq
878 aa
AA seq
DB search
MDNLSDFGSLCPSSRREWDTSSCVDDLMDEDEKDRAKRASRNKSEKKRRDQFNVLIKELC
TMLQGQGHPRKMDKSTILQRTINFLHTQKEITAQTESCEIRQDWKPSFLSNEEFTQLMLE
ALDGFLIALTTDGNIIYVSDSVSSLIAHLPSDMVDQNILNFLPEREHGEVYKLLSSHMLM
TDPISADFLDTNETHIEFCCHLARGNIDPKEPPTYEYVKFVGDFKFHNNVPTSSCNGFEL
TLPRTLQSSLEEQVCLVATVRLVTPQFLKDLCNVEDPCDEFTSRHSLEWKFLFLDHRASP
IIGYLPFEVLGTSGYDYYHVDDLQLIARCHKQLMQFGKGKSCYYRFLTKGQQWIWLQTHY
YITYHQWNSKPEFIVCTHTVVSYAEVRAERRREFGLEETSPEMATSSSIKAQEVYLDICP
NLDPPGQDRMSGACSVSSHSSRKSSHTALSDSASNTSLRFTDACTPSRQSASVAGTEKNL
ARLVPSSAKTLVQRQNSFDLLPQLSLPPSPTCSQHSVMQQQQQQQQSMYQQQPQEPQLGV
MNQLKEQLEERTRILQMDIKTQQQELHDIKEKLQLANLQMLLQQPIHGDFGQVQQQQPQQ
QGPGRPVQQHQPQSRVIRQASAHSKQPLHGAHDSSPHSLLREHSTPSPQVQQRLIRNAGG
QMQAVSLPVHTHTSLTMPFYSNPMMFSQQMNTQPLQDANQRHSDTEFSQEGQLRMLLNQP
MHTLLPDSSMSSQTSQCNTAIQQTKYTLEQQMMTPSFPMQQVNCNAVLVPSPVFTSPIMI
PHNSFITHQAQPTYHPQQQANHHSLQLQQPQQFFQMQPQGLLHSGPTQAFFHATNIPQQG
TVGYIQPQQQQPQQQQQQHHHSQNQTGNLSDFRNMLTR
NT seq
2637 nt
NT seq
+upstream
nt +downstream
nt
atggacaacctttccgactttgggtccctatgtccgtctagccgaagggaatgggacacc
agcagctgtgtggacgatttgatggatgaagatgagaaagacagggcaaaaagggcatct
cgtaacaaatcggaaaagaaaagaagagaccaattcaatgtgctcatcaaggagctgtgc
accatgctgcagggccaaggtcatccgcgcaagatggacaagtccaccatactgcagaga
acgatcaacttcctgcacacacagaaagaaatcacagcacagaccgagtcgtgtgagatc
cggcaggactggaagccttcgttcctcagtaatgaggagttcacccagttgatgctggag
gctttagacggtttcctcatagcactaactacagatggaaacattatatatgtgtccgac
agcgtgtcttcactcattgcccatttaccgtcagatatggtggaccaaaatatcttgaac
tttctccctgagcgtgagcatggggaggtctataagctgctatcatcccacatgctgatg
actgaccccatctctgctgacttcctagacacaaatgagacacacattgagttctgctgt
catttagccagaggaaacatcgacccaaaggaaccccctacatatgagtacgtgaaattt
gtaggagatttcaagtttcataacaatgtgcctacttcctcttgtaacgggtttgagttg
acattaccaagaaccctgcagtcatcactggaagagcaggtctgccttgttgccactgta
cgattagtcactccgcagtttttaaaggatttgtgtaatgtggaagatccctgtgatgaa
ttcacatccagacacagccttgaatggaagttcctgttcttagatcacagagcttcacca
atcattggctacttgccctttgaggttcttgggacttctggctatgattactatcatgtg
gatgacttgcagcttatagcgcggtgtcataagcaattaatgcagtttgggaagggtaaa
tcctgctactatcggtttctgaccaaggggcagcagtggatctggctccagacacactac
tacattacataccaccagtggaactccaagccagagttcatagtgtgcactcacacagtc
gtcagttacgcggaggtgagagcggagaggaggagagagtttggcttggaggagacgtca
cctgagatggccacttcgtcctccataaaggctcaggaggtgtacctggacatctgtccc
aatctggaccctcccggacaggacaggatgagcggggcatgctcagtgtcctcccacagc
tcccggaaatcctcccacacagccctgtccgactcggcatccaacacgtccttgcggttc
acagacgcttgcacaccatcacgacagtctgcatcagtcgcggggacagagaagaatttg
gccagactcgtacccagtagtgcaaagactttggtacagaggcaaaactcttttgacctc
cttccccaactgagcctacccccttctcctacctgcagccagcactccgtaatgcaacaa
caacagcagcagcagcagtccatgtaccaacagcagccccaagagcctcagctaggtgtg
atgaaccagctcaaggagcagctggaggagaggacacgcatcctgcagatggacatcaag
actcagcagcaggagctgcatgacatcaaggagaagcttcagctagctaacctccagatg
ttgttacagcaacccatccacggtgactttggccaggtccaacagcagcagcctcagcag
cagggtccagggaggccggtccagcagcatcagccccagtctagggtgatcaggcaggcc
tcggcccactccaaacagcctctccatggagcccacgactcgtcccctcactctctcctc
agagagcacagcacaccctcccctcaggtgcagcagagattgataaggaatgcaggcggg
cagatgcaggcagtcagtctcccggtgcacacccacaccagcctgaccatgcccttttac
agcaaccccatgatgttctctcagcagatgaacacacagccactgcaggacgcaaaccaa
agacactcagacaccgagttcagtcaagagggacagttacgcatgctgctcaaccagcca
atgcataccctcttacctgatagcagtatgagctcccagacttcccagtgcaacacagcc
atccagcaaaccaaatacaccctggagcagcagatgatgaccccgtcgttccccatgcag
caggtgaactgcaatgctgtcctggtcccctcccctgtattcacgtcccccatcatgatc
cctcacaacagctttatcacgcaccaggcccagcccacctaccaccctcagcagcaggcc
aaccatcactctctacagctgcagcaaccccagcagttctttcagatgcagccccaagga
ctcttacacagtggacccactcaggcgttcttccacgccactaatatcccacagcaaggt
actgtgggttatattcaaccgcagcagcagcaaccacaacaacagcagcaacaacaccac
cattcccaaaaccagactggcaacctttcagacttccgaaatatgctcactcggtag
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