Oncorhynchus nerka (sockeye salmon): 115105782
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Entry
115105782 CDS
T07952
Name
(RefSeq) amyloid protein-binding protein 2-like
KO
K25806
amyloid protein-binding protein 2
Organism
one
Oncorhynchus nerka (sockeye salmon)
Brite
KEGG Orthology (KO) [BR:
one00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
one04121
]
115105782
Ubiquitin system [BR:
one04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul2 complex
Target recognizing subunit
115105782
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_12
TPR_10
TPR_NPHP3
TPR_7
TPR_1
TPR_8
TPR_MalT
Motif
Other DBs
NCBI-GeneID:
115105782
NCBI-ProteinID:
XP_029484019
LinkDB
All DBs
Position
LG22:63765773..63791600
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AA seq
586 aa
AA seq
DB search
MAALELEWIPETLYNTAISAVVDNYSRSRRDIRCIPENIQFDVYYKLYQQGRLCQLGGEF
CELEVFAKVLRASDKRHLLHHCFQALMDHGVKVASVLANSFSRRCSYIAESDAHVKVKAI
HFGFVLGGFLSDAGWYGDAENVFLACLQLCTLHDEVLHWYRAVECCVRLLHVRNGNCKYH
LGEETVKLAQLYMDKLAKHGHQANKAALYGELCALLFAKSLYDEAYRWCIEAMKEITVGL
PVKVVVDVLRQASKACVVKREFRKAEHLIKHAVFLAREHFGHKHPKYSDTLLDYGFYLLN
VDNICQSVAIYQTALDIRQSVFGGKNIHVATAHEDLAYSSYVHLYSSGKFDNALFHAERA
IDIITHILPEDHLLLASSKRVKALILEEIAIDCHNKETEERLLQDAHDLHLSSLQLAKKA
FGEFNVQTAKHYGNLGRLYQSMRKFKEAEEMHIKAIQIKEQLLGQEDYEVALSVGHLASL
YNYDMNQYEDAERLYLRSIAIGKKLFGEGYSGLEYDYRGLIKLYNSVGNYEKVFEYHNIL
SNWNRLRDRQFAVADALEDVNTSPQATGEVVQSFLLSQNNGAGPPA
NT seq
1761 nt
NT seq
+upstream
nt +downstream
nt
atggcggcattggagctcgaatggatcccagagactctgtacaacactgctatatcagca
gtggtggacaattacagtcgatcgcgaagggatattcgttgcatccctgagaatattcaa
tttgatgtgtattacaagctgtaccagcagggtcggctctgccaactggggggagagttt
tgtgaactggaggtgtttgccaaagttctacgggcatctgataaaagacacctcctgcac
cactgcttccaagccctgatggatcatggggtgaaagtcgcctccgtcctggccaactcc
ttcagccgtcgctgctcctacattgcagagtctgatgcccatgtgaaagtgaaggccatt
cactttggctttgttttaggtggctttctgtctgacgcaggctggtatggtgatgcagag
aatgtgtttctggcgtgtctgcagctgtgcacactgcatgatgaggttctgcactggtac
cgtgctgtggagtgctgtgtcaggttgcttcatgtccggaatggcaactgcaagtaccat
cttggtgaagagactgtcaagttggcccagctgtacatggacaaactggccaaacatggt
catcaggccaacaaagctgcactctatggagagctgtgtgctctgctctttgctaagagc
ctttatgatgaggcctacaggtggtgcatagaggcaatgaaagagatcacagtgggtttg
cctgttaaggttgtggtagatgtcctaagacaggcttccaaggcctgtgtagtaaagagg
gagttcaggaaggcagagcatctgataaagcatgctgttttcctggcacgtgagcatttt
ggacacaagcatcccaagtattcagacactctccttgattatggtttttatttgctgaat
gtggataacatctgccaatcagttgcaatataccagacggctctagatatccggcagtcg
gttttcgggggaaagaatatccatgtggccacagcacacgaggacctggcatactcctcc
tatgtgcatctgtacagctctggcaaatttgacaatgcactattccatgcagagcgggcc
atagacattatcactcacattctcccggaggatcatctgctgctggcctcctccaaaaga
gtcaaagctctgatcctggaggagattgctattgactgccacaacaaggagacagaggag
aggctgctccaggatgcccatgacctccacctctcctctctccagctggccaagaaagcc
tttggggagttcaatgttcagacagcgaagcactatggcaacctgggccgcctctaccag
tccatgaggaagttcaaggaggcagaggagatgcacatcaaggccatccagatcaaggag
cagcttctgggtcaggaggactatgaggtggctctgtctgtgggccacctagcctctctc
tacaactacgacatgaaccagtatgaagatgcagagaggctttacctgcgctccattgct
atcggtaagaagctgtttggggagggctacagtggactggaatacgactacaggggccta
attaaactttacaactctgtggggaactatgagaaagtctttgagtaccacaatatttta
tccaattggaaccggctgagggaccggcagtttgctgtggctgatgccttagaggacgta
aacaccagcccccaggccaccggggaggtagtgcagtccttcctactgtcacagaacaat
ggggctggcccacctgcttag
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