Oncorhynchus nerka (sockeye salmon): 115105830
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Entry
115105830 CDS
T07952
Name
(RefSeq) uncharacterized protein LOC115105830 isoform X1
KO
K13886
coronin-1B/1C/6
Organism
one
Oncorhynchus nerka (sockeye salmon)
Brite
KEGG Orthology (KO) [BR:
one00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
one04812
]
115105830
Cytoskeleton proteins [BR:
one04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Cross-linking proteins
115105830
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DUF1899
WD40_Prp19
WD40_4
WD40
WD40_CDC20-Fz
Beta-prop_CAF1B_HIR1
WD40_WDHD1_1st
Beta-prop_EML_2
WDR55
Beta-prop_TEP1_2nd
Beta-prop_RIG_2nd
Beta-prop_EIPR1
Beta-prop_EML
Beta-prop_WDR35_TULP_N
EIF3I
ANAPC4_WD40
NBCH_WD40
WD40_RFWD3
Beta-prop_SPT8
Beta-prop_DCAF12
Methyltransf_15
Motif
Other DBs
NCBI-GeneID:
115105830
NCBI-ProteinID:
XP_029484104
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Position
LG22:complement(66218947..66249239)
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AA seq
1358 aa
AA seq
DB search
MEGQVMSKCPAGGGHRDSDTEDMTDRANTEDLISEPTKEVFVLLAKDESGLSCDVSSAIA
DSRDKEKEKKQPSVKIIVEEDTTSAASVDKPQDLPMLPTDPQRNVYSAVDDLRLSEDRLH
SGKKQQESQTGSSLGTETSKTQVTWDEETSSTVNTYCVLSGKGSSGCQAQTSRSQTDCSE
RADPHLAEPAGIGCPPKKAERTEGVKAISENESGITAVCDLKTGIQGNEPDLLSIESTRA
NSKSTDINNTLYDDIDCTHEDLVQLNIEEELDEKTEALIALNTKMKPDKRWEKTNPVKSG
SQTEKEQATAPDEHPQVKDTQKREVKRDCVTDNRIGPCESNQCEPELHMSSSTGVPGNLK
QPHPPKPPPRPNAKGTDKRQKIKSIHSQFDNVESNDGSVSLQQQTTTYTGKAKPVSSSPD
TCTSITNHQHLADDSLEQCNVIPSPPLSVPKLEDSDGQRQVVPMQREREPVCYTHVTTPP
PITHLLPEREMASAVPTQHNNSMDFTHTEDRTTRASIDPSVPVERPKPKGPPPPVPKKPQ
NPFKIPATKTSSMDEQKRGDDYHHKEEKKKRRQPHQVSKGSTCDTASRDMCVLWDDTGSS
YTVPSNMYTPDNFDSLDDFSQQQRAPTREEKYRNIIDFDAWARMVKLAAEEEKPKQLDML
DGRPFLEKQAKLKGPPPPVPKKPQKPFVPLETVPISEDIAWPSDDEEIRELELALCERME
EEDDDPEPQPDTVSTDVRWKNLGDHRIHSGLGEPTDRESVAELETETYRPVAELIKETNQ
MHQRIRHADQTEPLMAKSMIRHADQTEPLMAKSMIRHADQTERFMAKSMIRHAERTEPLM
AKSIDGAVDLGQSLKVSQMKKAFDFTKKPAEKPPETKPEPKKDMFRRVVRASKFRHVFGQ
ALKNDQCYDDIRVSRVTWDSSFCAVNPKFVAIIIEASGGGAFLVLPLLKTGRIDKAYPTV
CGHTGPVLDIDWCPHNDHVIASGSEDCTVMVWQIPENGLVTPLAEPVVVLEGHSKRVGIV
TWHPTARNVLMSAGCDNLIIIWNVGTGEAMIQLEDMHPDVIFSACWSRNGALICTACKDK
NIRVIDPRKEKIVAEKDKAHDGARPMRAIFLADGNIFTTGFSRMSERQLALWNPKSMEEP
ISVHELDTSNGVLLPFYDADTNIVYLCGKGDSSIRYFEITDEAPFVHYLNTFSSKEPQRG
MGYMPKRGLDVNKCEIARFYKLHERKCEPIIMTVPRKSDLFQDDLYPDTAGPDCAIEAED
WFDGKNGEPILISLKNGYVPGKNRDLKVVKKSNVLEGKPAKKAANTSPAESKASPHPSIQ
NEGKLEELLREVKSLRDLVTLQDRRIAKLEDQMSKVAI
NT seq
4077 nt
NT seq
+upstream
nt +downstream
nt
atggaaggacaagtaatgagtaaatgccctgctggtggtgggcacagagactcagataca
gaggatatgacagatagggctaacacagaggacttgatctcagaacctaccaaggaggtc
ttcgtacttctggcgaaggatgaatcggggttatcgtgtgatgtgagcagcgcgatcgct
gatagcagggacaaagagaaggaaaagaaacagccttctgtaaaaataatagtggaggag
gatacgacttctgccgctagtgtggataaacctcaagaccttccaatgttgcctactgac
ccacagaggaacgtttattctgctgtggatgatctgaggctcagtgaagacagacttcat
agcggaaagaaacagcaggaatcacagacaggctcatctttgggcaccgaaacaagcaaa
acacaagtaacatgggatgaggaaacaagcagcactgtaaacacttattgtgttctttcc
ggtaaaggtagcagtggttgccaggcacaaacctcacgttcacaaacagactgttcggaa
agagcagatccacatttggctgaaccggcaggcatcgggtgtcccccaaagaaggctgaa
cgaactgagggcgtcaaagctatttcggagaatgagtctggaattactgcagtttgtgat
ctcaaaacgggcattcaaggcaacgaaccagacctcttgagtattgaatcaactcgtgcc
aattccaagtcaactgatataaataatacattatatgatgatatagactgcactcatgag
gatttggtccaattgaatatagaggaagagcttgatgagaaaacagaagcattaattgcg
ctcaacacaaaaatgaagccggacaaacgctgggaaaagacaaatccagttaagagtggt
tcacaaactgagaaagagcaggccacagccccagatgagcatccacaggtgaaagacaca
cagaaaagggaagtaaaaagagactgtgtcacagacaacaggattgggccatgtgagtca
aaccagtgtgaacctgaactacacatgtcatcttcaacaggtgtcccaggaaatctaaaa
caaccacatcctcctaagcctccaccaaggccaaacgccaaaggtacagacaaaagacaa
aaaataaaatctattcattcacagtttgataatgtagagagcaatgatggaagtgtctcc
ttacaacagcagactacaacttatactggaaaagcaaaaccagtatcctcttcccctgac
acatgcacctccatcaccaaccatcaacatttagctgatgactcattagaacaatgcaat
gtgattccctcccctcctctctctgtgccaaagctagaggatagtgatgggcagagacag
gttgttcccatgcagagggagagagaacctgtctgttacactcatgtcaccaccccacca
cccatcactcaccttctgcctgagagggagatggcgagcgcagtgccaacacaacataac
aacagtatggatttcacccacacagaggacagaacaacacgtgcctctatagatccatct
gttccagtagagaggcctaaaccgaaggggcctcctccacctgtcccaaaaaagccccaa
aatccctttaagattccagctacaaaaacaagctctatggatgaacagaaaagaggtgat
gattatcatcacaaagaggaaaagaagaagaggagacaaccacatcaagtcagcaaagga
agtacttgcgacacagcttctcgggatatgtgtgtgttatgggatgacacaggttcttct
tacactgtaccatccaacatgtacacaccagataattttgattcattggatgatttttca
caacaacaaagggcaccaactagagaggaaaagtatagaaatatcatagattttgatgct
tgggcaagaatggtgaaacttgctgcggaagaggagaaaccaaaacaacttgacatgttg
gacggacgaccttttttggaaaagcaggctaaactcaaaggcccaccacctcctgtaccc
aaaaagccccaaaagccatttgttccattagaaacagttccaatctcagaggacatagct
tggccttcagatgacgaggagatacgagaactagagctggccttgtgtgagagaatggaa
gaggaagatgatgaccctgaaccccaacctgacacggtcagcacagatgtccgttggaag
aaccttggtgaccacagaatccatagtggtcttggtgagcctactgatcgtgagtctgtg
gctgagcttgaaactgaaacatacaggcctgtggctgagctcataaaggagaccaaccag
atgcaccagagaatcaggcatgcagaccagacagaacccctcatggccaagtccatgatc
aggcatgcagaccagacagaacccctcatggccaagtccatgatcaggcatgcagaccag
acagaacgcttcatggccaagtccatgatcaggcacgcagagcggacagaacctctcatg
gccaagtccattgacggggctgtggacctgggccagagcctgaaagtatcacagatgaag
aaggccttcgatttcactaagaagcctgctgaaaaaccaccagagacaaagcctgaaccc
aaaaaagatatgttcaggcgagtggtgcgagcgagtaagttccgtcatgtctttggccag
gcgctgaagaacgaccagtgctatgatgacatccgcgtctcccgggtcacatgggacagc
tccttctgtgccgtcaacccaaaattcgtcgccatcatcatcgaggccagtgggggcgga
gccttccttgtcctccctctgctaaagactggtcgcatagacaaggcctacccaacagta
tgtggtcatacgggtcctgtcctggacatcgactggtgccctcacaatgaccatgtcatc
gccagcggctcagaggactgcacagtcatggtgtggcagatcccagagaatgggctggtc
accccgctggctgagcctgtggtggtgttggagggacactccaagagggtgggcatcgtc
acttggcaccccacggcccggaacgtcctcatgagtgcaggctgtgacaacctgatcatc
atctggaacgtggggacgggcgaggccatgatccagctggaggacatgcaccctgacgtc
atcttcagcgcctgctggagtcgcaatggagccctcatctgcaccgcctgcaaggacaag
aatatccgtgtcattgacccccgcaaggagaagatcgtggctgaaaaggacaaggcccac
gatggagcacggcccatgagagccatcttcctggctgacggaaacatcttcaccaccggc
ttcagccgcatgagcgagcgacagctagccctctggaaccccaaaagcatggaggagcca
atatcagtccacgagctggacaccagtaatggagtgttgctgcccttctatgatgcagac
accaatatagtgtacctgtgtgggaagggtgacagtagcatccggtactttgagataaca
gacgaggctccattcgtgcactacctcaacaccttctccagcaaggagccccagcgaggt
atgggctacatgcccaaacgaggactggacgtcaacaagtgcgagattgccaggttttat
aaactacatgagagaaaatgtgagccaatcattatgacagtcccccgaaagtcggacctg
ttccaggatgacctgtacccggacacagcaggaccagattgtgccatcgaggcggaggac
tggtttgatgggaagaacggcgagcccatcctgatctccctgaaaaacggctatgtcccc
ggcaagaaccgcgacctcaaggtggtcaagaagtctaatgtcttggagggcaagccagcc
aagaaagcagcaaacacctcgcctgccgagagcaaggcctctccacatccatctatacaa
aatgaagggaaactggaggagctgctgcgagaggtcaagtcgctcagggacctcgtcacc
ctacaggaccgtcgaattgccaaactggaggaccagatgtccaaggtcgccatctaa
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