Oncorhynchus nerka (sockeye salmon): 115105846
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Entry
115105846 CDS
T07952
Name
(RefSeq) serine/arginine-rich splicing factor 9-like
KO
K21123
serine/arginine-rich splicing factor 9
Organism
one
Oncorhynchus nerka (sockeye salmon)
Pathway
one03040
Spliceosome
one05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
one00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
115105846
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
115105846
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
one03041
]
115105846
Spliceosome [BR:
one03041
]
Common components
Common spliceosomal components
SR proteins
115105846
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_3
DUF2457
RRM_7
Nup35_RRM_2
RRM_9
RRM_occluded
Motif
Other DBs
NCBI-GeneID:
115105846
NCBI-ProteinID:
XP_029484137
LinkDB
All DBs
Position
LG22:67054838..67059110
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AA seq
246 aa
AA seq
DB search
MTDGRIYVGNLPMDAQEKDIEDLFFKYGKIRDIELKNNRGTIPFAFVRFDDPRDAEDAVY
GRNGYGFGDSKLRVEYPRSSGAKFSGPMGEGGPRGRFGPPTRRSEFRVIVTGLPQTGSWQ
DLKDHMREAGDVCFADVQRDGEGVVEFVRREDMEYALRRLDGTEFRSHQGETANIRVHGE
RGASYGRSRSRSRSPRGRGYSPPPYQSRGSPPQRYQSPPRRLVSRHSPPARRHPVPYHSP
PPRHYR
NT seq
741 nt
NT seq
+upstream
nt +downstream
nt
atgactgatggaaggatctacgtgggaaatcttccaatggacgcccaggagaaggacata
gaggatctcttcttcaaatatggaaaaatccgggatatcgaactaaagaataacagggga
accatcccttttgcttttgttcgcttcgatgatccacgggatgcggaagacgcggtctat
ggaaggaatggatatggattcggagactccaagctgcgtgtagaataccctcgctcctct
ggcgccaaatttagtggccctatgggagaaggaggtcctagggggaggtttgggccccca
actcggagatctgagttccgggtgatagtgactggcttgccccaaaccgggagctggcag
gatctgaaagaccacatgcgtgaggcaggggatgtttgtttcgccgacgtgcagcgagat
ggtgaaggagtggtggagtttgttcgtcgggaggacatggaatacgccctgcgcagactg
gacgggactgagttccgttcccatcagggggagacggcaaatattcgtgtccacggagaa
cgtggcgccagttacggtcgctcgcggtctcgctccagatccccccgagggcgtggctac
tcaccacctccttaccaaagcagagggtcccctccacagcgctaccagtcacccccacgc
cgccttgtgtcgcgccatagccccccagcaaggcgacacccagtaccgtaccatagcccg
cccccacgccactatcgatag
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