Oncorhynchus nerka (sockeye salmon): 115105847
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Entry
115105847 CDS
T07952
Name
(RefSeq) long-chain fatty acid transport protein 4-like
KO
K08745
solute carrier family 27 (fatty acid transporter), member 1/4 [EC:6.2.1.-]
Organism
one
Oncorhynchus nerka (sockeye salmon)
Pathway
one03320
PPAR signaling pathway
one04382
Cornified envelope formation
Brite
KEGG Orthology (KO) [BR:
one00001
]
09150 Organismal Systems
09152 Endocrine system
03320 PPAR signaling pathway
115105847
09158 Development and regeneration
04382 Cornified envelope formation
115105847
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
one01004
]
115105847
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
one02000
]
115105847
Lipid biosynthesis proteins [BR:
one01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
115105847
Transporters [BR:
one02000
]
Solute carrier family (SLC)
SLC27: Fatty acid transporter
115105847
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Gene cluster
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C
POTRA_2
Motif
Other DBs
NCBI-GeneID:
115105847
NCBI-ProteinID:
XP_029484141
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Position
LG3:17137701..17167278
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AA seq
643 aa
AA seq
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MMRLACCTVLLFVLRLLVGLPWFQVLPSILIFYLGSGGWKFIHIFAKTIGRDLHAAGVLI
KVKWNVKRHLRERNTLPKIFAETVRRHGDKTALIFEGTGEKWSFRQLDEYSNRVANLLLQ
RGFVEGDVVALFMESRSQYVGLWLGMAKIGVEAALINFNLRLEALVHCVTISNAKAVVFG
SELTKAMCEVHSSMGKTVQMLCSGDWDPKQVPVGTECLEPLLDAAPTHLPSRPDRCFTDR
LFYIYTSGTTGMPKAAIVVHSRYYRMAALVYYGFGMTSDDVMYDCLPLYHSAGNIVGVGQ
CLIHGMTVVIKKKFSASRFWDDCAKYNCTIVQYIGEICRYLLNQPIKDIERQHRVRMALG
NGLRQSIWEEFTSRFNVPQIAEFYGATECNCSLGNFGNMTGACGFNSQILPFIYPIRLVK
VDEETMELTRGPDGVCIPCKPGEPGQLVGRIIQNDPLRRFDGYVNEGATTKKIANNVFKK
GDSAYLSGDVLIMDQYGYMYFKDRTGDTFRWKGENVSTTEVEGTLSRLLDMKDVVVYGVE
VPGAEGKAGMAAVADPERSTDLEKFGKDLEKALPPYARPVFLRFLNEVNKTGTYKFQKTE
MRREGFDPSITSNKLYFLDPSRGRYVELHQELYSSIISGKQKL
NT seq
1932 nt
NT seq
+upstream
nt +downstream
nt
atgatgcgcctggcctgctgtactgtcctgctcttcgtgctccgtctcctggtgggcctg
ccctggttccaagtcctcccctccatcctcatcttctacctgggctctggaggttggaag
ttcatacacatttttgccaagaccatcggcagagacttacatgcagcgggcgtcctcatc
aaggtgaaatggaacgtcaagcgtcacctgcgggaacgaaataccctcccgaagatcttc
gcagagaccgtgcgtcgccatggggacaagacagcgctcatctttgaaggcaccggcgag
aagtggtccttccggcagctggacgagtactccaaccgcgtggccaacctgctgctccag
aggggcttcgtggaaggggatgtggtggctctcttcatggagagccgatcccagtacgtg
ggcctctggctgggcatggccaagattggtgtggaggcggccctgatcaacttcaacctg
aggctggaggccttggtgcactgtgtcaccatttccaacgccaaggctgtggtgttcggc
agcgagctgaccaaggccatgtgtgaggtacacagttccatggggaagacagtgcagatg
ctgtgttcaggggactgggaccccaaacaggttcctgtggggacagagtgcctggagcct
cttctggacgctgcccccacccacctgcccagccgcccagaccgctgcttcacagatcgt
ctgttttacatctacacatctgggaccactgggatgcccaaagctgccatcgtggttcac
agcaggtactaccgcatggcagcgttggtatactatggcttcgggatgacgtctgatgac
gtgatgtacgattgccttccactctaccactctgcaggtaacatagtcggagtggggcag
tgcctgatccatggcatgacagtggtcatcaagaagaagttctctgcctcccggttctgg
gatgactgtgccaagtacaactgcacgattgtccagtacatcggggagatctgccggtac
ctgttgaaccagccaataaaggacatagagcggcaacaccgggtccgcatggcgctgggt
aacggcctgcgccagtccatctgggaggagttcacctctcgcttcaacgtgccacagata
gcagagttctatggcgccacagagtgcaactgcagcctaggcaacttcggcaacatgacg
ggagcgtgcgggttcaacagccagatcctccccttcatctaccccatcagactggtgaag
gttgacgaagagactatggagctcactagagggcccgatggagtctgcatcccatgcaag
cctggtgagcccggccagttggtgggtaggataattcagaatgatcccctgagaaggttt
gatggctacgtgaacgaaggagccaccaccaagaagatcgctaacaacgtcttcaagaag
ggagacagcgcctatctgtcaggcgatgtcctcatcatggaccagtatggctacatgtac
tttaaggaccgtactggggacacgttccgctggaagggagagaacgtgtcgaccacggaa
gtggaggggacgttgagtcgtctattggacatgaaggacgtggtggtctacggagtcgag
gtcccaggagccgaggggaaggctgggatggctgctgtagcagatccagagaggtctaca
gacctggaaaagtttgggaaggatctggagaaagccctgccgccatacgcacgacccgtc
ttcctacgcttcctcaacgaggtcaacaagacaggcacctataagttccagaagacagag
atgcggcgggagggttttgacccaagcatcacgtcaaacaaactgtacttccttgacccc
agcagggggcgctatgtggagctgcaccaggagctctacagcagcatcatctcagggaag
cagaaactgtaa
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