Oncorhynchus nerka (sockeye salmon): 115105854
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Entry
115105854 CDS
T07952
Name
(RefSeq) PDZ and LIM domain protein 5-like isoform X1
KO
K19867
PDZ and LIM domain protein 5/6/7
Organism
one
Oncorhynchus nerka (sockeye salmon)
Pathway
one04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
one00001
]
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
115105854
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
one04990
]
115105854
Domain-containing proteins not elsewhere classified [BR:
one04990
]
LIM domain-containing proteins
PDZ-LIM family proteins
115105854
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
PDZ
DUF4749
PDZ_6
PDZ_2
Motif
Other DBs
NCBI-GeneID:
115105854
NCBI-ProteinID:
XP_029484151
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Position
LG22:67412371..67520480
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AA seq
375 aa
AA seq
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MNSNYSVSLGGPAPWGFRLQGGKDFCLPLTISRLTDGGKAAKAKMSVGDVVLSIDGIATN
GMNHLEAQNKIKACTDNLNLTLQKASSVPKADTPKDEPLEIIKPVPITHPAPPFTSPSPQ
PGAAYNKTARPFGGGSNVGAVTSSLTAPKVASIPSASSAFTPAAPSSQQPQPPFPLASSS
RSPAPPSSAPPPRPGSGRSPFTTPSSTPSSSSSSSPARVTAPSSNPGAPQSSCYNTPINL
YSNANVCEVAIGQRRGLLEAQGVVVDQIKEQFNGVPPKTGPRRNRVEPELTHASPLSEAS
KKRLIEDTEDWHPRTGTSQSRSFRILAQITGTEKDQAQENSAGKKVNKPDPKVGQQYNKL
RDRHHSVSAGTLNVQ
NT seq
1128 nt
NT seq
+upstream
nt +downstream
nt
atgaacagcaactacagcgtctccctgggtggccccgccccctggggcttcagactgcag
ggaggaaaggacttctgtctgcccctcactatctcacggctgaccgatgggggcaaagca
gccaaagccaaaatgagtgtgggagatgtagttctgtctatcgacggaatcgccaccaac
ggcatgaaccacctggaggcccagaacaagatcaaagcctgcactgacaacctcaacctc
accctgcagaaagcttccagtgttcccaaggctgatacaccaaaggacgagccactggag
atcattaagcctgtgccaatcacccatccagctccgcccttcaccagcccctccccccaa
cccggtgctgcctacaacaagacggcccgcccctttggcgggggcagcaatgtgggtgca
gtcacttcctccctgaccgccccaaaggtggcctccatcccctctgcatcgtctgctttc
acccccgccgccccctcctcccagcagccccagcctcccttcccactagctagcagctcc
cgctccccagccccacctagctcggccccaccccccagacccggctctggccgttccccc
ttcaccaccccctcctccactccctcctcttcttcctcatcctccccggccagagtgaca
gccccctcctccaatcccggtgctccgcagtcctcttgctataacacgccaataaacctt
tactccaatgccaatgtctgtgaggtggccataggacagaggcggggcctgttggaagcc
cagggtgtggtggtcgaccagatcaaagaacagtttaatggagtccccccaaagactggc
cctaggaggaacagagttgaaccagagttgacccacgcctcgcccctcagcgaggccagc
aagaagcgtctgatcgaggacacagaggactggcatcctcgcaccggaacctcccaatcc
aggtccttcagaatcctggctcagatcaccggcacagagaaagaccaagcccaggagaac
agcgctggaaagaaggtgaacaaaccggacccaaaggtgggacaacagtacaacaagctg
agagacaggcaccacagtgtttcggcaggcacactcaacgtgcagtag
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