Oncorhynchus nerka (sockeye salmon): 115105875
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Entry
115105875 CDS
T07952
Name
(RefSeq) 3'-5' exoribonuclease 1-like
KO
K18416
3'-5' exoribonuclease 1 [EC:3.1.-.-]
Organism
one
Oncorhynchus nerka (sockeye salmon)
Brite
KEGG Orthology (KO) [BR:
one00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
one03019
]
115105875
03036 Chromosome and associated proteins [BR:
one03036
]
115105875
Messenger RNA biogenesis [BR:
one03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Other 3'-5' decay factors
115105875
Chromosome and associated proteins [BR:
one03036
]
Eukaryotic type
Gene silencing
RNA interference (RNAi) pathway
Other RNAi proteins
115105875
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
SAP
Motif
Other DBs
NCBI-GeneID:
115105875
NCBI-ProteinID:
XP_029484193
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All DBs
Position
LG22:68404149..68407434
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AA seq
372 aa
AA seq
DB search
MSKMEEYKENIQDRGGNVKLSSKPEEDDKSCSRVRVCSNIGEPVPQASPTHGDFSDPVYK
AIALANGHINRMNKDELRDKLAELKLDTRGVKDVMKKRLKNYYKKQKLSMTQSVTAGEAT
DTYYDYICVVDFEATCEQDNPADFTHEIIEFPMVLLNTHTLEIEDTFQEYVRPEVNTQLS
EFCVKLTGITQKMVDEADTFPDVLERVVLWLQEKELGTKYKYTLLTDGSWDMSKFMNTQC
HLNRLRFPQFAKKWINIKNLYGNFYKVPRTQTKLSCMLEKLGLKYEGRPHSGLDDSRNIA
HIAMRMLQDGCQLRINECMHEGQLRTVPSSAPVEGAPPPQQRLDLGSASPGSESPALRPS
SRHPMSVLPPWL
NT seq
1119 nt
NT seq
+upstream
nt +downstream
nt
atgtcaaaaatggaggaatacaaagagaatattcaagacaggggtggcaatgtgaaattg
tcctctaaaccggaagaagatgacaagtcttgcagcagagtcagagtttgtagtaacatc
ggtgaacccgtccctcaagcatctcctactcacggcgacttcagtgatcctgtttacaaa
gcgattgctcttgcaaatggacatatcaaccgcatgaacaaggatgaacttcgtgacaaa
ctggcagaattgaagcttgacacaaggggtgtgaaggatgtgatgaagaagcggttgaag
aactactacaagaaacagaagctgtcgatgacgcagtctgtaacagcgggtgaagccacg
gatacctactacgactacatctgcgtggtggactttgaagcaacgtgtgaacaggacaac
cccgctgacttcactcatgaaatcattgagttcccaatggttctgctcaacacgcacact
ttagagattgaagacacctttcaggaatatgtcagaccagaagtcaatacacagctgtca
gagttctgtgtaaagttgacaggaataacacagaaaatggtggatgaagctgacacgttc
cctgatgtccttgagcgggttgtgctttggcttcaggagaaagagcttggcacaaaatac
aaatacactcttcttacagacggatcttgggacatgagcaagttcatgaacacccagtgc
catttaaatcgtctcagatttccacagtttgcaaagaagtggatcaacatcaaaaattta
tacgggaacttctataaggtccctcgcacccagaccaagctgagttgcatgcttgagaag
ctgggactaaaatacgagggccgccctcactctggcctggatgattcacgcaatatcgcc
cacattgcaatgcgcatgctgcaagacggctgccaactgcgcatcaacgagtgcatgcac
gaaggacagctgcggactgtgcccagctctgcccctgtggaaggagccccacccccgcag
cagagactagacctcggctctgcatcccctggctctgagagtcctgcattgaggccttca
agcaggcatcccatgtctgttttacccccatggctttaa
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integrated database retrieval system
