Oncorhynchus nerka (sockeye salmon): 115105880
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Entry
115105880 CDS
T07952
Name
(RefSeq) BRCA1-A complex subunit Abraxas 1
KO
K20774
BRCA1-A complex subunit Abraxas
Organism
one
Oncorhynchus nerka (sockeye salmon)
Pathway
one03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
one00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
115105880
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
one03400
]
115105880
DNA repair and recombination proteins [BR:
one03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
BRCA1-A complex
115105880
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
MPN_2A_DUB_like
DUF3461
JAB
Motif
Other DBs
NCBI-GeneID:
115105880
NCBI-ProteinID:
XP_029484204
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Position
LG22:68666883..68671385
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AA seq
404 aa
AA seq
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MEDSNSYIRVSGFVLGSLMFQHLNSDSDVEGLILGETKAEERSNITDSQIDNIQFEHTIN
IQKHISCRKLNSFYNRIGEVNQDEIRHILSNYKEENVIGWYKQRRNTDQQITFREQVVHE
NLKRALSNHELVFLLLTPSEITTLGSTHKLEYAVFRSHGSQYCSVPVLVSNLGLLEEQDY
WRLSASCSSVNYNHAVRKHRSKFFSSDGSLHEVDEINDMNNSLQGELTMACKKVEESERL
VEKLLADVSDLRRMVNDRKQELGEISADGASTPAQPQENVLLCEVIKTLFPGASLLQTQA
LNLQGFPLPEFCCSTDHGIDLATTLPLILSHTLPKARKGRLGRGGGTSWRKRPLRESSEV
PKRRKGMLEETEESLSVSGSETEEDLIPANQNGNDLDVSNSPVF
NT seq
1215 nt
NT seq
+upstream
nt +downstream
nt
atggaggactcaaactcttatattcgcgtctccggatttgttcttggttcattgatgttt
cagcacttgaacagtgattctgatgtggaaggtctcattctcggggagaccaaagctgaa
gagcgaagcaacatcactgactctcaaatcgacaacatacagtttgagcatacaataaac
attcagaaacacatatcatgtcgcaagctcaatagcttctataatagaataggggaggtg
aaccaggatgaaataaggcacattttatccaactataaggaggagaatgtgattggttgg
tataaacagcggagaaacacagatcaacaaattaccttcagagagcaagtagtccacgag
aacctgaagagagcactctccaatcacgagctggtctttctgctactgacacccagtgag
atcacaacacttggctccactcacaaactggagtatgcagtcttcagatcacatggcagt
cagtattgcagtgtacctgtcctggtcagcaacctgggtttgttggaagagcaggactac
tggagactctctgcatcttgttcatcagtcaactacaaccatgctgttaggaaacacaga
tctaaattcttctcctccgatggatctctgcatgaggtggatgagattaatgacatgaac
aactccttgcagggtgaactgacgatggcatgtaagaaagtggaggagagtgaacgattg
gtcgagaagctgcttgcagacgtttctgatctaagaaggatggtcaatgataggaaacaa
gagctgggagaaatctcagcagatggagcctccaccccggcacagccccaggagaatgtg
ctgctctgtgaggtcatcaaaacactatttcctggggcatctctactccaaacgcaggct
ctaaacctccaggggtttccattgcctgagttctgctgcagcactgaccatggcatagac
ctcgctacaacactgcctttgatcctgagtcatacactccctaaagccaggaaggggagg
cttgggagaggtggaggtacatcctggagaaaacgtccccttcgtgaatcatctgaggtg
cccaagaggaggaaaggcatgctggaggagactgaggagtctttgtcagtcagtgggtct
gagaccgaggaggatttgatcccagccaatcagaacggaaatgatttagatgtgtccaat
tcccccgtcttctga
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