Oncorhynchus nerka (sockeye salmon): 115105960
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Entry
115105960 CDS
T07952
Name
(RefSeq) contactin-associated protein-like 4 isoform X1
KO
K24337
contactin associated protein-like 3/4
Organism
one
Oncorhynchus nerka (sockeye salmon)
Brite
KEGG Orthology (KO) [BR:
one00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
one04990
]
115105960
Domain-containing proteins not elsewhere classified [BR:
one04990
]
Laminin domain-containing proteins
Laminin G domain-containing proteins
115105960
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Laminin_G_2
Laminin_G_1
F5_F8_type_C
Laminin_G_3
F5_F8_type_C_2
EGF
PMP1_2
CatAgl_D1
Motif
Other DBs
NCBI-GeneID:
115105960
NCBI-ProteinID:
XP_029484360
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Position
LG22:complement(71739080..71956559)
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AA seq
1337 aa
AA seq
DB search
MVALLRQHHFVLNMDLRTRRHSGMILQLAVLLWCSHGAIGKDSCDGPLVSNLPQSSFRSS
SQLSNSHGPGFAKVNRRDGAGGWAPVESNKYQWLEVDLGERTEITAVATQGRYGSSDWVS
SFLLMFSDTGCNWKQYRQEDNIRAFTGNSNADSVVQFKLQQPVFARFLRLLPLDWNPNGR
IGLRLEAYGCPYKSDVARFDGSSCLLYRFSPNPTSSQTAKDTISLKFKTLQNSGTLIHTE
GQDDHTITLELHKGKLLLHLRKDKSVSPGPESHMVVSLGSLLDDQHWHHVAIERFSGHLN
FTVDKSSQQIQVPAELSPSEINEISYGGVQCHGSQRVMSRRNFHGCLENLLWNDVNVIDL
AKQQQQVSIMGNVTFTCAEPVSVPVTFAGAQSFLQLPGAAQQQRDGGEVAVAVVGVAISL
QFRTWNRAGLLLTFDLQQQAGSLWLYLSEARVRLQIHKAGRYTILVDVTAGFGLNDGQWH
SVDLTARRGHLTITVDKEEDSTAHASPSFPVVSGNNLFFGGCPDSEYNQECRNPFTVFQG
CMRHIHVDNNAVDLIKVQQMLIGNYSDLQIDMCGIIDRCSPSHCEHGGRCTQSWSTFHCN
CSNTGYSGATCHSSVYEKSCEAYKHQGNTSGLYYIDVDGSGPIKSQLIYCNMTDKTWLVI
QHNNTELTKLKASSGINQHLAYLNYSADAEQLWAIITQAEHCEQEVLYHCRKSLLLNTPD
GSPFTWWVGRTDEPQTYWGGAVPGSQQCGCGLQGNCIDSDHYCNCDADRKEWATDSGLLT
HKENLPVRWVVVGDIQRPGSEAAYKVGPLKCHGDKNFWNAAFFNKETSYLHFPTFHGELS
ADISFLFKTTAASGVFLENLGIKDFIRVELGSPTEVVFSFDVGNGPFEVRVETGDVALND
DRWHRVRAERNVKEASLRVDAFPNATQKAPADGHIHLQLNSQLFVGGTASRMKGFLGCIR
SLQLNGRTLDLEERAKITPGVRPGCPGHCSSYGELCQNQGRCVEMYNGFSCDCGLSAYAG
PFCQREVSADFKPGTSVQYTFKEPYELNRNISTQSSSIYSDLKLRGENVSFSFRSSQSPA
LLLYVSSYYREYLAVLLNRNGYLDVKYKLQNSRDAEVFRTSVKNLANGQLHRVSIRRLSE
TVSVQIDQHEREDFNLTSDAEFNAIKSVVLGKVHESGELDPEIARLNSQGFSGCLSVVQF
NSVAPLKAALLYPNTSPVIVIGSLAESTCGSSSPANPYPAETTHSLSDHLGTVGTGELIV
NAIKSDSALIGGVIAVVIFVILCALAIMARFLYRRKETFHTQEPQGIKPEADSPEYPFHS
EPNSQNILSENQKEYFI
NT seq
4014 nt
NT seq
+upstream
nt +downstream
nt
atggtcgctctcctccggcagcatcatttcgttttgaacatggatttgaggaccagaaga
cacagtggaatgattttacagctcgccgtccttctctggtgttcacatggggcaattgga
aaagacagctgtgatggcccactggtgtccaacctgccccagtcctccttcagaagctcc
tcacagttatccaacagccatgggcccggctttgctaaagtcaacaggagagatggtgct
ggaggctgggctcctgtggagtctaataagtaccaatggttggaggtggacctgggggag
cggacagagatcacagccgtggccacgcagggtcgctatggcagctcagactgggtctcc
tccttcctcctcatgttcagcgacacgggctgcaactggaaacagtaccgccaggaggac
aacatccgggcgttcacagggaacagtaatgcagacagtgtggtgcagtttaaactgcag
cagccagtcttcgccaggttcctgcggttacttcctctagattggaaccccaacgggagg
ataggtctgagactggaagcctatggatgcccttacaagtctgacgtggcaaggtttgac
ggcagcagctgcttgctctacaggttcagccctaacccaacatcaagtcaaacagccaaa
gacaccatctctctgaagttcaaaaccctgcagaactctgggaccttgatacacacagag
ggacaagatgatcacaccatcacgctggagttacacaaaggaaaacttttactccatctc
agaaaagataaaagtgtctctcctggtcctgagagccacatggttgtgtcactgggtagt
cttctagatgaccagcactggcaccacgtagccatcgagcgctttagtggccacctcaac
ttcactgtggacaaaagctctcagcaaatccaggttcctgcagaactcagtccttccgag
ataaacgagattagctatggtggcgtccagtgccatggaagtcagagggttatgtccagg
aggaacttccatgggtgccttgagaacctgctctggaacgatgtgaacgtgatagatctg
gccaaacagcaacagcaggtctccatcatgggcaatgtgacctttacatgtgctgagcca
gtctctgttcccgtgacgttcgccggcgcgcagagttttctccagttgccaggggcagcg
cagcagcagagagatggcggcgaggttgccgtggcggtggttggcgtggcgatcagcctg
cagttccggacctggaatagagcgggccttctgttaacctttgacctccagcagcaggcg
ggaagcctgtggctctacctgagtgaggccagagtcaggctgcagatacacaaggctgga
agatacacaatcctagtggacgtaactgcaggatttggtctgaacgatggccagtggcat
tcagtagacctaactgcaaggagaggtcatctgaccatcactgtggataaagaggaagac
tccacggctcatgccagcccatctttccccgtggtatcaggaaacaacctcttctttgga
ggttgcccggacagtgagtataaccaggagtgcagaaaccccttcaccgtgttccaaggc
tgtatgagacacatccatgtggataacaatgctgtggatctcatcaaggtacaacagatg
ctgataggaaactacagcgatctccaaatcgacatgtgtggaatcatcgacagatgctct
ccaagccattgtgaacacggggggagatgcacccagtcttggagtaccttccattgcaac
tgttcgaacacgggctacagtggagcaacatgtcacagctctgtctatgagaagtcatgt
gaagcgtataaacaccagggtaacacatcaggcctgtattacatagatgtggacggaagt
ggtccaataaagtcacagctgatctactgcaacatgacagataaaacatggctggtgatc
caacacaataacacggagctaaccaaattaaaggcctcatctgggataaatcagcattta
gcctatttgaactattctgccgacgcggaacagctctgggccataattacccaggcagag
cactgcgagcaggaagtcctctaccactgcagaaagtcactcctcttaaacacaccagat
ggatctcccttcacctggtgggtgggtcgtacagatgagccccagacgtactggggtggg
gcggtaccagggagccaacagtgtggctgtggtcttcaggggaactgcatcgactcagac
cactactgcaactgtgacgctgaccgcaaagaatgggcgactgactctggtctgctcacc
cataaggagaatctgccagtcagatgggtggttgttggggatatacagagacctggatca
gaggcagcctataaagtcggaccactcaagtgtcatggtgacaagaacttctggaacgca
gcgttcttcaacaaagagacgtcatatctgcacttccccacgttccacggagagctgagt
gcagacatctccttcctgttcaaaaccaccgctgcttcaggagtcttcctggaaaacctg
ggcatcaaagacttcatacgggtggaactcggctcgccgacagaggtggtcttctcgttt
gacgtgggcaacggcccctttgaagtgcgggtggagacaggcgatgtggcactaaacgac
gacaggtggcaccgtgttcgagcggagcgaaatgtaaaagaggcttcgctgcgtgtggac
gctttccccaacgccacacagaaggcccccgccgatggtcacatccatctgcagctcaac
agccagttatttgtaggtggcacagcctccagaatgaaaggcttcctggggtgtatccgc
tcgctgcagctgaacgggaggacactggacctggaggagagggccaagatcacgcccggg
gtgaggccgggctgcccgggacactgcagcagctacggggagctgtgccagaaccaaggg
aggtgcgtggagatgtacaacggcttctcctgtgactgtggcctctcagcctatgcaggc
cccttctgccagagagaggtctcggctgacttcaaacctgggacatcggtccagtacaca
ttcaaggagccgtatgagctgaacaggaacatcagcacccagtcctcctccatttactct
gacctcaagctacggggagagaacgtgtcattcagcttccgtagctcccagagtcccgcg
ctgctcctctacgtcagctcctactatagagagtacttggctgtgctgctcaataggaat
ggttacctggacgttaaatacaagctgcagaacagtagagatgctgaggtgttcaggacc
agcgttaagaacctggccaacggacaacttcacagagtctccatcagaaggctttcagag
actgtcagtgttcagattgaccagcacgaaagggaagacttcaatctcacatctgacgca
gaattcaatgctatcaagtcagttgtcctggggaaagtgcacgagtctggtgagctggat
ccagagattgccaggctgaactcccaaggtttcagtggctgtctgtcggtggtccagttt
aactccgtagccccactgaaggcagcgctgctttaccccaacaccagcccagttatagtg
attggatccctagcagagtccacctgtggctcctcatctccagccaatccctacccagct
gaaactacacactccctatcagatcatttaggtacagtaggtactggtgagcttatagtc
aatgcaatcaagagtgactctgcattgattggaggtgtgattgctgtggtgatatttgtg
attctgtgtgcgttggcaataatggcaaggttcctgtatcgacggaaagagacattccac
acccaagaaccccagggaatcaaacctgaggccgacagtcctgaataccctttccacagc
gagcccaactcacagaacatactaagtgaaaaccaaaaggagtatttcatataa
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