Oncorhynchus nerka (sockeye salmon): 115105966
Help
Entry
115105966 CDS
T07952
Name
(RefSeq) chondroitin sulfate N-acetylgalactosaminyltransferase 1-like
KO
K00746
chondroitin sulfate N-acetylgalactosaminyltransferase 1/2 [EC:
2.4.1.174
2.4.1.175
]
Organism
one
Oncorhynchus nerka (sockeye salmon)
Pathway
one00532
Glycosaminoglycan biosynthesis - chondroitin sulfate / dermatan sulfate
one01100
Metabolic pathways
Module
one_M00058
Glycosaminoglycan biosynthesis, chondroitin sulfate backbone
Brite
KEGG Orthology (KO) [BR:
one00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00532 Glycosaminoglycan biosynthesis - chondroitin sulfate / dermatan sulfate
115105966
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
one01003
]
115105966
Enzymes [BR:
one01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.1 Hexosyltransferases
2.4.1.174 glucuronylgalactosylproteoglycan 4-beta-N-acetylgalactosaminyltransferase
115105966
2.4.1.175 glucuronosyl-N-acetylgalactosaminyl-proteoglycan 4-beta-N-acetylgalactosaminyltransferase
115105966
Glycosyltransferases [BR:
one01003
]
Glycan extension
O-Glycan
115105966
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CHGN
Glyco_transf_7C
Glyco_tranf_2_2
FAM184
Csm1_N
Motif
Other DBs
NCBI-GeneID:
115105966
NCBI-ProteinID:
XP_029484373
LinkDB
All DBs
Position
LG22:72244524..72293229
Genome browser
AA seq
568 aa
AA seq
DB search
MLRRGLLAWVSRVGVLLVLVCCSLSLLYVMTCSPHSEDNLVSHALPRPGMGVGVGGAAGG
TGAAQIGPTGRNGYQAMLAEREEQHKFHITSLKKQIAQLKEALQERSEQLKGVQDSMERG
TGGGRGGQSPGGGILGEGGQGPGADRSHADLQEFLHSQLGRAEVHQGTRLPSEYAMVPFE
SFTLQRVYQLEMGLTRHPEEKPVRKDRRDELSEALETALQSLNTPRNGADKGHTTKVYSA
SDFIEGITRTEKDKGTVYELTFKGDQSREFRKLVLFRPFGPLMKVKNERVDTANVRINII
VPLSQRADKFRHFMHNFREVCVRLDGRIHLTVVYFGKDQMNEVRSTLENTSREINFKNFT
LLQLNEEFSRGRGLDVGARAWKGGNVLLFFCDVDIYFTADFLNTCRLNTQPGKKVFYPVL
FSQYNPTLIYGNHDYIPPVEQQLVIKKDTGFWRDFGFGMTCQYRSDFINIGGFDVDIKGW
GGEDVHLYRKYLHSNLLVVRSPSRGLFHLWHEKRCADELPPEQYRMCMQSKAMNEASHGQ
LGMLFFRHEIEAHLHKQKPQRLNPAKKT
NT seq
1707 nt
NT seq
+upstream
nt +downstream
nt
atgctgcggaggggtctgctggcctgggtgtcccgtgtgggcgttctgctggtcctagtg
tgctgctctctgtccctcctctacgtcatgacctgcagcccccactccgaggacaacctg
gtgagccatgccctgccacgccccgggatgggggttggggtaggaggggcagcagggggc
acaggggcagctcagatcggacccactgggcggaatggataccaagccatgcttgcagag
cgcgaggagcaacacaagttccacatcactagtttaaagaaacaaatcgcccagctgaag
gaggcactacaggagcgcagcgagcagctgaaaggagttcaagactccatggagcggggg
acagggggaggccggggtggccagtccccaggaggaggtatccttggggagggaggacaa
gggccaggggccgacaggagccacgctgaccttcaggagttcctccacagtcagctgggc
cgggcggaggtccaccaggggaccagactacccagtgagtacgccatggtgcccttcgag
agcttcaccctgcagagggtgtaccagctggagatgggcctgacaaggcaccctgaggag
aagcctgtgaggaaggaccggagggatgagctgagtgaagcgctagagacagccctgcag
agtctcaacacgccccgcaacggagcagacaagggccacaccaccaaggtctactcagca
tcagacttcatagaaggtatcactcggacggagaaggacaaaggcactgtgtatgagctc
accttcaaaggggaccagagccgtgagttcaggaagctggttctgttccgtccctttggg
ccgctgatgaaggtgaagaacgagagggtggacacagctaacgtccgcatcaatatcata
gtgcccctctcccaacgagctgacaagttcagacactttatgcacaacttcagagaggtg
tgtgtgcggctggacgggcgtatccacctaactgtggtgtactttgggaaggaccaaatg
aatgaagtcaggagcacgctggagaacacatctagggagatcaactttaagaacttcact
ctgctccagctgaatgaggagttctcccgggggcgtggcctggatgtgggtgccagggcg
tggaaaggagggaacgttctccttttcttctgtgatgtcgacatctacttcaccgctgat
ttcctcaacacctgccgactcaacactcaacctggtaaaaaggtgttctatcctgttctg
ttcagccagtacaacccaactctgatttacggtaaccacgactacatccctccagtggag
cagcaactggtcattaaaaaggatacaggattctggagagactttggcttcggaatgaca
tgccaataccgatcagatttcatcaacataggtggtttcgacgtggacatcaaaggctgg
ggcggcgaggacgtgcacctttacaggaaataccttcacagcaacctgctggtggtgcgg
tccccgtctaggggcctcttccacctgtggcacgagaagcgctgcgcggacgagctgccc
ccggaacagtacaggatgtgcatgcagtccaaggccatgaacgaggcctcgcacggccag
ctgggcatgctcttcttccgacacgagatcgaggcacacctgcacaagcagaaaccccag
aggctaaaccctgccaagaagacatga
DBGET
integrated database retrieval system
