Oncorhynchus nerka (sockeye salmon): 115106004
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Entry
115106004 CDS
T07952
Name
(RefSeq) E3 ubiquitin-protein ligase UHRF2-like isoform X1
KO
K15713
E3 ubiquitin-protein ligase UHRF2 [EC:
2.3.2.27
]
Organism
one
Oncorhynchus nerka (sockeye salmon)
Brite
KEGG Orthology (KO) [BR:
one00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
one04121
]
115106004
Enzymes [BR:
one01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
115106004
Ubiquitin system [BR:
one04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
115106004
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TTD
SAD_SRA
ubiquitin
PHD
PHD_2
zf-C3HC4_2
zf-RING_10
zf-RING_2
Rad60-SLD
Motif
Other DBs
NCBI-GeneID:
115106004
NCBI-ProteinID:
XP_029484424
LinkDB
All DBs
Position
LG22:73607087..73649757
Genome browser
AA seq
1044 aa
AA seq
DB search
MWIQIRTIDGKETRIIEDLSRLTKIESLRLKIQDIFNVNPGQQRLFYRGKQMEDGHTLYD
YNVGLNDIVQLLIRSQAGDAPDSPLVISPVVSPKECDTMPPTTPNTTTGAATTPSKPTTV
TPTLTPKPTTVNNNTTTTGDTSTTTNISTTTSKKTGITSDPNNNGDESSSGPSAPLEKHD
NQPSTSTRPFLIDAGIGVFKIKELVDCRDISIGAWFEACIDNVSLSPKGQNSTSKAPTAG
KVGRPSKRTNGKLETEPGQGQSHLSSSDNNNNNGNNSTSVLNSDSIGPGAGPSTSQTDYT
ATDKEKEDVTYHIRYDDYPENGVVEMCGGNVRPRARTLLRWDQLTVGLVVMVNYNIEIPE
ERGFWFDAEITALNEISRTNKEVRIRILLGGPGDVIPDCKLLFLDEIYQIEKTGAHSLSA
VDGQFKRKSGPECKHCKTDPESECRFCSCCVCGGKQDAHMQLLCDECNMAFHIYCLNPPL
ATIPDDEDWYCPTCKNDTSEVVKAGEKLKASKKKAKMPSAHTESQRDWGKVRHMVYDTNP
WAHTERDWGKVRHMVYDTNPWAHTESQRDWGKVRHMVYDTNPWAHTERDWGKVRHMVYDT
NPWAHTERDWGKVRHMVYDTNPWAHTESQRDWGKGMACVGRTKECTIVPSNHYGPVPGVP
VGTTWKFRVQVSEAGVHRPHVGGIHGRSNDGSYSLVLAGGFEDEVDRGDEFTYTGSGGRD
LSGNKRIGEHSFDQTLTHYNRALALNCDAPINDKDGAESRNWRAGKPVRVVRSSKGRRIS
KYAPEEGNRYDGIYKVVKYWPEKGKCGFLVWRYLLRRDDLEPAPWTPEGLARIQTLGLAV
QYPPGYVEAMANKTKKEANARPGSSRSKKHPGRGRPRLQPLKKKVKEEEDEEEEEKPMEG
TDQSQSNGSQETEVCKESTEPRAKRQKMEEAFQLTEQQQSLIKEDQSNRKNWDEAMGHLK
EGPNFLRKVEQTFMCVCCQELAYQPITTICTHNVCKTCLQRSFRAEVYTCPACRHDLGKD
YVMVLNKTLQLLLDQFFPGYSKGR
NT seq
3135 nt
NT seq
+upstream
nt +downstream
nt
atgtggattcaaattcggaccatagacggaaaggagacacgaatcattgaggatctttcc
aggctgaccaaaattgagtctctgaggctgaaaatccaagatatcttcaatgtaaacccc
ggacaacaacgattattctatcggggcaaacagatggaagatggccacacactgtatgac
tacaacgtgggtctgaacgatatcgtccagctgcttatccgttcccaagcgggggacgct
ccagacagtcctctcgtcatctcccctgtcgtcagccccaaggagtgtgacacaatgccc
cccaccacccccaacactacgactggtgcagctaccaccccctctaaacctaccaccgtg
accccaacacttacccccaaacccaccacagtcaacaacaacacaaccaccactggcgac
accagtactaccaccaacatcagtacaactaccagtaagaagacgggtatcaccagtgat
cccaataacaacggagacgagtcttcttctggtccatcggcaccactggagaagcacgac
aatcagccatcaacctctacacgtcccttcctcatagacgcgggaattggggtgttcaag
ataaaggagttggtggactgcagggacataagcatcggtgcctggtttgaagcctgcatc
gacaacgtgtcactcagcccaaagggacagaacagcaccagtaaagctcctacagcaggg
aaggttggcaggcctagcaaaaggacgaacggcaagcttgagacagagccgggccaaggc
caaagccacctctcctcctcagacaataataataataatgggaataattctacttctgtg
ttgaactctgacagtattgggccaggggctgggccctccacctctcaaacagactatact
gccacagacaaagagaaggaggatgtgacgtaccacatcagatatgatgattaccctgag
aacggcgtggtggagatgtgtggcggtaacgtgcggccgcgggctcggaccctgctccgg
tgggaccagctcacggtaggcctggttgtcatggtgaactacaacatagagatcccagag
gagaggggcttctggttcgatgctgagattacagcactcaatgagatctccaggaccaac
aaggaggtccgcatcagaatcctgctgggagggccaggggacgtcatcccagactgtaaa
ctgttgtttctggatgagatctatcagattgagaagactggagcacactcgctgtctgct
gtagatggacagttcaaacgcaagagcgggccggagtgtaagcactgcaagacggacccc
gagtcggagtgcaggttctgctcgtgctgcgtgtgtggagggaagcaggatgcccatatg
cagctgctgtgtgatgagtgtaacatggccttccatatatactgtctcaacccaccgcta
gccaccatacctgacgacgaggactggtactgtcccacctgtaagaacgacaccagtgag
gtggttaaggccggggagaagctgaaggccagtaagaagaaagccaagatgccctcggcc
catacagagagccagagggactggggcaaggtgagacacatggtctacgacactaacccc
tgggcccatacagagagggactggggcaaggtgagacacatggtctacgacactaacccc
tgggcccatacagagagccagagggactggggcaaggtgagacacatggtctacgacact
aacccctgggcccatacagagagggactggggcaaggtgagacacatggtctatgacact
aacccctgggcccatacagagagggactggggcaaggtgagacacatggtctatgacact
aacccctgggcccatacagagagccagagggactggggcaagggtatggcctgtgtgggg
cgcactaaggaatgtaccatcgtcccctccaaccattacgggccagtacctggggttccc
gtgggaacaacatggaagttccgcgttcaggtgagcgaggcgggagtgcacaggccccac
gtgggaggtatccacggccgcagtaacgatggctcctattcgctggtgctggctgggggc
ttcgaagatgaagtggacaggggagatgagttcacctacacaggcagcgggggtcgcgac
ctttcagggaacaagcgcattggggagcattcctttgaccagaccctgacccactacaac
agggccctggcgctgaactgtgacgcccccatcaacgacaaggatggggcggaatccagg
aattggcgtgcggggaagccggtgagggtggtgcggagctccaagggccgacgtatcagc
aagtacgctccggaggagggcaaccgatacgatggcatctacaaggtggtgaagtactgg
ccagagaaagggaagtgtggtttcctggtgtggaggtacttgctgcgaagggatgacctg
gagcctgctccctggacacctgaggggctggcgcgcatccagacactgggcctggctgta
cagtatcctccaggctacgtggaggccatggccaacaagaccaagaaggaggctaatgct
cggccagggtccagcaggagcaagaagcaccctggaaggggccggccgcggctacaacct
ctgaagaagaaggtgaaggaggaggaggatgaagaagaggaagagaagcccatggagggt
acagaccagtcacagagtaacggcagtcaggagacagaggtgtgtaaggaatcgacggag
ccccgagccaagcgtcagaagatggaggaggcgttccaactgacagagcagcagcaaagc
ctcataaaggaagaccagtccaacagaaagaactgggacgaggccatgggacacctcaag
gaggggccgaacttcctgaggaaggtggaacagacgtttatgtgtgtctgctgccaggag
ctagcctaccagcccatcaccaccatctgtacacacaacgtgtgtaagacctgtctccag
cggtcgttccgtgctgaggtgtatacctgccctgcctgtcgccacgacctggggaaggat
tacgtcatggtcctaaacaagactctacagctgctgctggaccagttctttcctggctat
agcaagggccgatga
DBGET
integrated database retrieval system
