KEGG   Oncorhynchus nerka (sockeye salmon): 115106032
Entry
115106032         CDS       T07952                                 
Name
(RefSeq) AF4/FMR2 family member 1-like isoform X1
  KO
K15184  AF4/FMR2 family member 1
Organism
one  Oncorhynchus nerka (sockeye salmon)
Brite
KEGG Orthology (KO) [BR:one00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:one03021]
    115106032
Transcription machinery [BR:one03021]
 Eukaryotic type
  RNA polymerase II system
   Other transcription-related factors
    Super elongation complex (SEC)
     115106032
SSDB
Motif
Pfam: AFF4_CHD AF-4 AF4_int
Other DBs
NCBI-GeneID: 115106032
NCBI-ProteinID: XP_029484488
LinkDB
Position
LG22:75969817..76048004
AA seq 1161 aa
MAARSSYNEERNLLRIQERERRNQGNFQEKEFYQETVPLFGEPYKTNKGDELSSRIQRML
GSYEDVNNPNTHQCLDSSFSKEPQSHATTKYGRPSRSRDRAKPPFQNPPQYGASQSQSGG
PPRGSHSGQPLKKNHVPSSSYTQSSLSLSQGQACPDPHQRKTELWPDLRECASLPPVLSA
LSPPADPLSPLHSSDPSDSEHQDSPLHPERHPASPLHPDSHFPMVSPLDDPQRDIPPPAI
DGATLPSQTFPPPLASKPNLVMPQKPTAYVRPMDGQDQVTSESPDLKPSPEDFHGQSYHE
PLPDLKSTKPSLSKLKIPSQSIETLSHEADCVEDILREMTHSWPPLLTAIQTPSTVEPSK
FSFPVKEAQHVPPASPGQKHYGSPPLAPPSICQQSSCTVTAAHSSGVESASSSDSESSSG
SESGSESGESGTEAPPQPLRSSSPPVTKAEGPVVTNWQLNNWIRVSQQNPSTESQSDTLL
SPLPKQQQSHEEEAIPPRDYKSHTPPRRSEFSDGEAKPQRSEEAAHNQHVQHKSPAASHV
GNSSNSSSQRKTVGNKHPSRPAKAPRPEDPQAGLQVESVEVVPRDKDTSFTDKPKVKTKT
GHSNSKSSGAKTNSRKPAKRGTAEKKTEQPESQGGPKVTLVLDCKREKSPSPSPAQEVDQ
PTPAVVKTISVRTETLPAPQKGQKKPRRHSLDPAHKAKRESSAKASRVCQGPPRALLVKI
ELSLLSRVPSQGSRPSSGGQEPAIRKGPNTAPERGDTNPAAPIPTKVCKKRPAEKDVKTV
PRKKPKLQKDLKPSTSGPGSRKSETEKKRSKGAPVPLLQPTATQDPGKGQGGHKRHAVDA
PEPSTASAAHRRDREASTPVKHKKSTGKQRTEHAKKGLKSSVAFSVPSQPTGAALSSRPL
LQFEERQQPVEYHMKEAKTLKHKADATPDKVGKAFNYLDAAMSFVESGIAMETDPQTPKS
AYTMFAETLDLIKFILKLKGSVNPSAPATDKDFTVLCMRGLSLLQMAMFRYKREAALKYS
RTLTDHFKSSIKSATQAPSPCVSKSTGTPSPMSPMPSPASTASSGPGSNHSSGAGAGTVS
TVAIPQVIQQVASSYVNITALFLSAHDIWEQADELAHKGSGLLSELDLALGPLSLTSTMS
SLVRHTRQGLQWLRLDTREAQ
NT seq 3486 nt   +upstreamnt  +downstreamnt
atggcagctcgttcaagctacaatgaggagaggaacctccttcgcatccaagagcgggag
cggcggaatcagggaaacttccaggaaaaggagttctaccaggagaccgttcccctgttc
ggggaaccctataagacgaacaaaggagatgagctgtccagccgtatccagaggatgctg
ggtagttatgaggatgtgaacaatcccaacactcaccagtgtttggacagcagcttctct
aaggagcctcaatctcatgccaccacaaagtatgggcggccatctcgcagccgagaccga
gcgaagcctccattccagaaccctcctcagtacggggcaagccagagccagagtggtggt
ccgccccgtggtagccactctggccagcctctgaagaagaaccacgttccttcctcctcc
tacacccagtcctccctgagtctcagccagggccaggcctgcccagacccacaccagaga
aagactgagctctggccagacctgagggagtgtgccagtcttcctccagtcctctccgcc
ctgtcccccccagccgatcccctatcccccctacattccagtgaccccagcgactctgaa
caccaggactcccccctgcaccctgagaggcacccggcctctcccctacaccccgactca
cacttccccatggtgtcccccctggatgacccccagagagacatcccgcctccggccatc
gatggggcaaccctaccctctcagaccttccctccaccactggcctccaaacccaacctg
gttatgccccagaagccaacagcctatgtccggcccatggacggccaagaccaggtgacc
agcgagtctccggacctcaagccctctccagaagacttccatgggcagtcttatcatgaa
cccttaccagacttgaaaagcaccaagcccagcctttccaaactgaagataccatcacag
tctatagagacgctgtcacatgaagctgactgtgtggaagacattctgagggaaatgacc
cactcctggcctcctctcctgactgccatccagacgcccagcacagttgagccctccaag
ttctccttcccagtcaaggaagcacagcatgtcccacctgcgtctccaggacaaaaacac
tatggatcacctccactagccccgccctccatctgtcaacagagctcatgtacggttaca
gcagcacattccagtggggtggagtcagccagctccagtgactctgagagcagctcaggg
tcagagtcaggcagtgagagcggtgagagtgggacagaggcccccccacagcccctcagg
agtagtagcccacctgtgacaaaggcggagggccccgtggtgactaactggcagttgaac
aactggatcagagtgagccagcagaaccccagcacagagagccagagtgacactctactg
agccctctacccaaacagcagcagagccatgaggaggaggccattcctcccagggactac
aaatcccacacacccccacgtcgctcagagttcagtgacggcgaagccaaacctcaacgc
agtgaagaagctgcccacaaccagcatgtccaacacaagtccccggccgcctcgcacgtt
gggaacagcagcaacagcagcagccagagaaagaccgtggggaacaaacacccctccaga
ccagccaaggctccccgacctgaagaccctcaggctgggttacaggtggagagtgtggag
gtggtcccccgtgacaaagacacctcgttcacagacaagccaaaggtcaaaacgaaaacc
ggccacagcaatagcaagagcagcggagccaaaacaaacagcaggaagcctgccaagcgt
ggcaccgctgagaagaagaccgaacaaccagagtcacagggtggccccaaggtcactctg
gtgctggactgtaagcgggagaagtctcctagtcccagtcctgcccaggaggtagaccag
ccaaccccagctgtggtgaagaccatcagtgtcaggacggagaccctcccggcccctcag
aagggccaaaagaagccccggcgccactctctagacccagcacacaaggccaagcgggag
tcctcagccaaagcttccagggtctgccaaggtcctccacgggccctgctggtaaagata
gaattgagcctgctgtccagggttccctcccagggctccaggccttcttcagggggacag
gagccagccatcaggaagggacccaacacggcccccgagaggggggacaccaaccccgct
gcccccatccctaccaaagtctgcaagaagagaccggctgagaaggatgtgaaaaccgtg
ccaaggaagaagccaaagctgcagaaagatcttaaaccctccacttcaggtcctggttcc
cgcaagtctgagactgagaagaagcggtctaagggggctcctgtccctctgctgcagccc
accgccactcaggaccctgggaaagggcaggggggccacaaacggcatgcggtggatgcc
ccagagcctagcacagcatctgcagcccaccgcagggacagggaggcctccacacctgtc
aagcacaagaagagcactggaaaacaacgcacagagcatgccaagaaaggcctcaagagc
agcgttgccttctccgtgccttcccagcccaccggggccgccctgtcctccagacccctg
ctccagttcgaagagcggcagcagccagtggagtatcacatgaaggaagccaaaacactc
aagcacaaggcagatgccacgccggataaggtgggcaaagctttcaactacctagatgct
gccatgtccttcgtggagagcggcatcgctatggaaaccgatccccagaccccgaagtcg
gcgtatacaatgttcgctgaaaccttggatctgatcaagttcatactgaaactaaagggc
tctgtgaacccctcggctcctgctacagacaaggactttacagttttatgcatgaggggc
ctgtcccttctacagatggccatgtttcgctacaaacgagaagcagcacttaagtattca
aggaccctgacagatcatttcaagagttctataaagtctgcaacccaggctccttcacca
tgtgtctcaaaaagcacaggtaccccatcccccatgtctcccatgccgtctcctgccagc
acagccagttctgggccgggctccaaccacagcagcggggcgggggcaggcaccgtcagc
accgtggccattccacaggtcatccagcaggtggcgtcttcctacgtcaacatcacggca
ctcttcctgagtgctcacgacatctgggagcaggctgacgagctggcccacaaaggcagt
ggtttgttgtctgagttggacttggctctgggcccgttgagcctgacgtccaccatgagc
tctttggtgcgtcacacacggcagggactgcagtggctccgactggacacccgtgaggca
cagtga

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