Oncorhynchus nerka (sockeye salmon): 115106111
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Entry
115106111 CDS
T07952
Name
(RefSeq) signal peptide, CUB and EGF-like domain-containing protein 1
KO
K24468
signal peptide, CUB and EGF-like domain-containing protein 1/3
Organism
one
Oncorhynchus nerka (sockeye salmon)
Brite
KEGG Orthology (KO) [BR:
one00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
one04990
]
115106111
Domain-containing proteins not elsewhere classified [BR:
one04990
]
EGF-like domain-containing proteins
hEGF / cEGF domain-containing proteins
115106111
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
FXa_inhibition
Ephrin_rec_like
cEGF
EGF_3
EGF_CA
CUB
EGF
hEGF
TNFR_ELAPOR1_6th
Orbi_NS3
Motif
Other DBs
NCBI-GeneID:
115106111
NCBI-ProteinID:
XP_029484534
LinkDB
All DBs
Position
LG23:37120047..37221917
Genome browser
AA seq
1021 aa
AA seq
DB search
MGSACFSWEVCLFFVLINTCEVMGDVGLAEADECSEGTDDCHIDALCQNTPKSFNCICKP
GYKGDGKQCEDMDECENEYNGGCVHECINIPGNYRCTCYDGFMLAHDGHNCLGLLQRPLV
LNYRSTDPSTTNMICLSLSLSLFLSLSLSVSLSLSLRLSPSTDGMNCMNKDHGCAHICRE
TPKGGVACECRPGFELAKNQRDCTLTCNYGNGGCQHMCDDTDVGPVCGCHQKYALHSDSK
TCIERDEAAIESSEFNATSIADVDKRVKRRLLMETCAVNNGGCDRTCKDTATGVRCSCPV
GFTLQPDGKTCKDIDECQEATNNGGCDHFCKNTVGSFECSCQKGHKLLTDERTCQDIDEC
SFERTCDHTCVNYPGSFDCVCQEGYTLYGLTHCGDIDECSINNGSCEHSCVNTQGGYECL
CPPGQKLHWNKKDCTKAVKCLADGKPAPRAQLSCDKRGGVEVCSLSCPSNALFLADSENS
YTLSCGVPVQPGKAPQKRNTTTALLTCADTLPPPIKQKARFKVKDAKCHLRPRNKEKHRE
MSKPSLQGGPLPCTDDCQVTFVNLKCDSSKKRRRGRKSPSKEVSHITAEFEMEMKEASDL
CNVECVRERMKQRLQSAMRTLRKSINKQQFYIQFSGTEYEVAQKPALHVEQCSTGQVLRD
GKCVSCGVGTYYSGDHDQCIVCPPGTYQDTMGQLSCEPCPSTEGQGIAGAKNVSQCGGQC
PAGQYSSDGFRPCNPCPLGSFQPEPGRVLCFSCGGGLMTKYEGSVAFRDCEAKVHCAPGH
HYNSSNHRCIRCPSGTYQSEFGQNYCITCPGNTTTDFDGATNVSHCKNQVCGGELGDFTG
FIESPNYPGDYPSNVDCIWTINPPHKRRILIVVPEIFLPIEDECGDVLVMRKSALPTSIT
TYETCQTYERPIAFTSRSRKLWIQFKSNEGNSGKGFQVPYVTYDEDYQQLIEDIVRDGRL
YASENHQEILKDKKLIKALFDVLAHPQNYFRYTAQESKDMFPRSFIKLLRSKVTRFLRPY
K
NT seq
3066 nt
NT seq
+upstream
nt +downstream
nt
atgggaagtgcttgtttttcctgggaagtatgtttgtttttcgtcctcattaatacctgt
gaggtgatgggggatgttggactcgcagaagccgatgaatgctctgaaggcacggatgac
tgtcacattgatgccctctgccagaatacccccaaatccttcaactgcatctgcaagccg
ggatacaagggagacggcaagcagtgtgaagacatggacgagtgtgagaatgagtacaac
ggaggctgtgtccatgagtgtatcaacatcccgggcaactacaggtgcacctgctacgac
ggattcatgttggcccacgacggacacaactgtctggggctcctacaaagacctttggtc
ctcaactacaggtctacagacccatctaccactaatatgatttgtctttcactctctctc
tctctctttctctctctctccctctctgtctctctgtctctctccctccgtctctctccc
tccacagatggaatgaactgcatgaacaaggaccacggctgcgcccacatctgcagggag
acccctaaggggggtgtggcttgcgagtgccggcccgggttcgagctggcaaagaaccag
agagactgtacattgacgtgtaactatgggaacggaggctgccagcacatgtgcgacgat
acggatgtggggccggtttgtggctgtcaccagaagtacgccctgcactcagacagcaag
acctgcatcgagagagatgaggctgcaattgagagctctgagttcaatgccacgtcaata
gctgatgtggacaagcgggtgaaacggcggctacttatggaaacctgtgcggtgaacaat
ggcggctgtgaccggacgtgcaaggatacggctacaggggtccgctgcagctgccccgtg
ggattcaccctgcagccagacggcaagacctgcaaagacatagatgaatgccaggaggcg
accaataacggcggctgtgaccatttctgcaaaaacacggtgggctcctttgagtgcagc
tgccagaagggccacaagctcctcactgacgagcgcacctgccaggatattgacgagtgt
tcctttgagaggacctgtgaccacacctgcgtcaactaccctggcagcttcgactgtgtc
tgtcaggaaggatacactctgtacggcctcacacactgcggagacatagatgagtgcagc
attaacaacgggagctgtgagcacagctgtgtgaacacacagggaggctatgagtgtctg
tgtccgcccggtcagaaactccactggaacaagaaggactgcaccaaggcggtgaagtgt
ttggccgacgggaaaccagcgccgcgcgcccagctcagctgtgacaagagaggaggggtg
gaggtgtgctccctctcctgtccgtccaacgcactcttcctcgcagactctgagaacagc
tacacactaagctgtggtgtgccggtgcaacctgggaaggcaccgcagaagaggaacacc
accaccgccctgctcacctgtgcagatacgttacccccgcccatcaagcagaaggcccgc
ttcaaggtcaaagatgccaagtgtcacctgagacccaggaacaaggaaaaacacagagag
atgtccaagccgagcctgcaagggggtccgctcccgtgtactgacgactgccaggtgacc
tttgtcaatctgaagtgtgattcatccaagaagcggcggcgtggacgcaagtccccttcc
aaagaggtttcccacatcacagctgagtttgagatggagatgaaggaagcctcagacttg
tgtaacgtggagtgtgtgagggagcgtatgaagcagaggttacagagtgccatgcggact
ctgaggaagtccatcaacaagcagcagttctatatccagttctctggtaccgagtacgag
gtggcccagaaacctgcactgcacgttgagcaatgcagcaccggacaggtcttacgggac
ggcaagtgtgtgagctgtggtgtggggacgtactatagtggagaccatgatcagtgtatc
gtgtgtccccctggtacataccaggacacaatgggtcagctgtcctgtgaaccctgcccc
agcaccgagggacagggcatcgccggggccaagaacgtctcccagtgcggaggccagtgt
ccggctggtcagtattcgtcagatgggttccgtccctgtaacccctgtcccctgggctcc
ttccagccggagcctggacgtgtactctgcttctcctgtggagggggcctcatgaccaag
tacgagggctctgtcgccttcagggactgtgaggccaaagtccactgtgctcctggacac
cactacaactccagtaaccaccgctgtatccgctgcccatccggtacctaccagtcagag
tttggacagaactactgcatcacctgccctggcaacaccaccaccgactttgacggagcc
acaaacgtctctcactgcaagaaccaggtgtgtggcggtgagctgggggactttacaggc
tttattgagtctcctaactaccccggggactacccgtccaatgtagactgtatctggacc
atcaacccccctcacaagagacgcatcctcatcgtggtgcctgagatcttcctccccatc
gaagacgagtgtggagatgtgctcgtcatgaggaagagtgccctgcccacctccatcacc
acctatgagacgtgtcagacgtacgagcggccaatcgccttcacctcccgctcccgcaag
ctctggatccagttcaagtccaatgagggcaacagtggcaagggcttccaagtcccctat
gtcacctacgatgaggactaccagcagctgatagaggacattgtccgggacggcagactc
tacgcatcagagaatcaccaagagatactgaaagataaaaaactgatcaaagccctgttt
gatgttctggctcacccccagaactacttcaggtacactgcacaggagtccaaagacatg
ttcccccgctcattcatcaaactgctgcgctccaaagtcacacggttcctacggccgtac
aaataa
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