Oncorhynchus nerka (sockeye salmon): 115106203
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Entry
115106203 CDS
T07952
Name
(RefSeq) neurogenic differentiation factor 2-like
KO
K09078
neurogenic differentiation factor 2
Organism
one
Oncorhynchus nerka (sockeye salmon)
Brite
KEGG Orthology (KO) [BR:
one00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
one03000
]
115106203
Transcription factors [BR:
one03000
]
Eukaryotic type
Basic helix-loop-helix (bHLH)
Tal/Twist/Atonal/Hen, Atonal
115106203
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Motif
Pfam:
Neuro_bHLH
HLH
YL1
Nop53
CCDC106
CDC45
Motif
Other DBs
NCBI-GeneID:
115106203
NCBI-ProteinID:
XP_029484631
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Position
LG23:15878894..15882582
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AA seq
438 aa
AA seq
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MAWHHNWYVTHPALVEDATLLSLCVWGRDSTAKKHQARLQPHLLECPCRRGVDLDWPPGD
GVNKRAFAPHRAPRRRATMLTRLFSEVLPDVQKLSGWVDDSEGEDSKTKEDDLGHLEDDD
LDDGDAREGSSRDQSEMAGDDDDDDDDVDDEDCGDENEGGDKPKKRGPKKRKMTPARIER
SKVRRQKANARERTRMHDLNSALDNLRKVVPCYSKTQKLSKIETLRLAKNYIWALGEILR
NGKRPDVVSYVQTLCKGLSQPTTNLVAGCLQLNSRNFLTEQCPDGARFHVPNSSFSVHPY
SYPCPRLSSPQCQPGSSGHMRTHNYGYGDAVYPGAVSPEYNSPDYEGHHSPPVCVNGNFS
VRQQESVSPDADRNYHYAMHYSGLSASRAPAAHGLAFGPSGARSGSAHSENVPPPFHDVH
LHHDRAPVYEELNAFFHN
NT seq
1317 nt
NT seq
+upstream
nt +downstream
nt
atggcctggcatcataactggtatgtaacccacccagccctggtagaggatgccacacta
ctgtctctgtgcgtttggggtagggatagcacagcgaagaagcatcaagctaggctacag
ccgcacctattggagtgtccgtgcaggaggggtgtggacttggactggccacccggagat
ggtgtaaacaaacgcgctttcgcccctcaccgagctccaagacggcgtgccaccatgttg
acaaggctattcagcgaggttctgccggatgtccagaagctctcgggttgggtggacgac
agcgagggcgaggactccaaaaccaaggaggacgacctgggtcacctggaagacgacgac
ttggatgacggcgacgccagagagggaagcagccgggatcagtccgagatggctggggat
gacgacgacgacgacgatgacgtcgacgatgaggactgcggggatgagaacgagggggga
gacaaacccaaaaagcgcggcccaaagaaacgcaagatgacgccagcaaggattgagcgc
tccaaagtgcggcgtcaaaaagccaatgcacgagagagaacgcgcatgcacgatttgaac
tctgcactggacaatttgcgtaaagtagtcccatgttattccaaaacgcaaaaactctcc
aagatagagacgctgagactggctaagaattacatttgggcgctcggagagatattgcgc
aacggtaaaaggccagatgtggtatcctacgtgcagacactgtgcaagggcctatcccag
cccaccacgaatctagttgctggttgtctgcagctcaactctcggaacttcttgacagag
cagtgtcctgacggggcccggttccatgtccccaactcctctttctccgtgcacccttac
tcctacccgtgtccccgtctgtctagccctcagtgccaacccggctccagtgggcatatg
aggacccataactacggctatggcgacgcggtctacccaggggccgtctccccggagtac
aacagccctgactacgagggccatcacagtccgcctgtgtgcgtcaacggcaacttttcc
gtgaggcaacaggagtctgtgtcaccggatgcagacaggaactatcactatgctatgcac
tattctggactgtctgcatctcgggcacctgctgcccacggcctagcgttcggcccctca
ggagcgcgcagcggttccgcgcactctgaaaacgtgccgccgccgtttcatgacgttcac
ttacaccatgacagggcgcccgtgtacgaggaactgaacgccttctttcacaactga
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