Oncorhynchus nerka (sockeye salmon): 115106295
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Entry
115106295 CDS
T07952
Name
(RefSeq) nucleolar and coiled-body phosphoprotein 1-like isoform X1
KO
K25818
nucleolar and coiled-body phosphoprotein 1
Organism
one
Oncorhynchus nerka (sockeye salmon)
Brite
KEGG Orthology (KO) [BR:
one00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
one03021
]
115106295
Transcription machinery [BR:
one03021
]
Eukaryotic type
RNA polymerase I system
Other transcription-related factors
Others
115106295
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
SRP40_C
Motif
Other DBs
NCBI-GeneID:
115106295
NCBI-ProteinID:
XP_029484731
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All DBs
Position
LG23:complement(776106..796605)
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AA seq
1103 aa
AA seq
DB search
MAEQSSVPSDLYKHVYSFLLENKFTKAAQHFIKQAKVPPQDEKEAAGLLDIFNFWVKSPE
AKKRKALPIGPGSSDSPSAKKAKTAESSSEESSSEEEEAAAPAKATPTAAKAPGPAKSDS
SSSDDSSDEEEAVAKKPAAAKAPVKSPVVSAAKAPVKSPVVSAVRTKSSSSESSEDEAKA
PAAKRKAAAATPKAGKAAAATPKAGKAAAATPKAGKAAAATPKAGKAAAATPKAGKAAAA
TPKAGKAAAAQKKTASSSSSEDTSSEDEAPTKTPVKPPGPAKTPPAKDSSSSDSSDDSSD
EEEKKKVSAKTVKTTPAKTVTPKAAAAAKKAESSSESTDSSSEEEAAKKPTPAKATPAKA
TPAKATPAKATPAEDSDSSSEDEEEAKKPEVIRVKSTAVKVTVTPAKEDSSSDSSSEEEE
EEKGSKTVKVAPATATVTVAEVKERGAKTVTVAGAKATVKVVEDGSSSSSSEDDEEGTVK
AAPAKATPTVTRGKAAESSSDSDSSSEDEEEAKKPAAKVTPAKTAPAKKSDSSSSDSDSS
SEDETPAKPAAPKAPAKAATENSSDSDSSSEDDEPPAKKATPAAVPKSASKPATPVPKSA
SKPATPVTKSASKPATPVTKPAAAESSSDSDSSSEDDEPPAKKATPASVAKSASKPATPV
PKPASKPATPVTKAAESSSDSDSSSDEDEAIAKKATSKPATPVVTKSASKPATPVVAKSA
SKPATPVVTKSAPAKAAAESSSDSDSSDSEDQAAATKKTTPKTTPKPAAKSPAVKTPAKA
AESSSSEESSSEEEEASKKTVKPATAPATAPATAPKTTAAARPKAKEDSSSSDDSSDEEA
APKPAAVKATTPASAKKAAESSSDSSDSSDSEVETEAAKATPAKPALTNGKPATPKATTS
AVKATKPTKAAESSSSEESSSEEEASKKTVKPAATPKTTPKTTPAARPKTKEASSSSDDS
SSSEEEEAAEKAPAAVTTPIANGIVNGKRKRGGGASEDEEELTTPKNNKAAATTPQTFPK
VSKKINVPFRRIREEEIDVDNRLADNSFDAKRGSDGDWGQRANDVLRFTKGKSFRHEKTK
KKRGSYCGGAISQSVNSIKFDSD
NT seq
3312 nt
NT seq
+upstream
nt +downstream
nt
atggcggagcaaagttccgtgccgagtgatctttacaaacatgtctattcatttctactg
gagaacaagtttaccaaggctgcccaacacttcatcaaacaagctaaagtgccaccccag
gatgaaaaagaggccgctggtcttcttgacattttcaacttctgggtgaagtctcccgaa
gctaagaaacgcaaggcgctgcccattggtcctggatccagtgacagtccgtctgctaag
aaggcaaagactgcagagagctccagtgaggagtcgagcagtgaggaggaggaagctgca
gcacctgccaaggccacacccacagcagccaaggctccaggccctgctaaatccgattcc
agcagcagtgatgattccagtgacgaagaggaggctgtagcgaagaaacctgcagcagcc
aaagccccagtgaagagcccagtggtgtcagcagccaaagccccagtgaagagcccagtg
gtgtcagcagtcaggacaaagagctccagcagtgagtcatctgaagatgaggccaaagct
cctgcagctaaacgaaaggctgcagccgcgacccctaaggcaggaaaggctgcagccgcg
acccctaaggcaggaaaggctgcagccgcgacccctaaggcaggaaaggctgcagccgcg
acccctaaggcaggaaaggctgcagccgcgacccctaaggcaggaaaggctgcagccgcg
acccctaaggcaggaaaggctgcagccgctcagaagaagactgcgagcagcagcagtagt
gaagacacctccagtgaagacgaggcgcccactaagaccccggtgaaacctcctggcccc
gccaagacccctccagctaaggacagtagttcctcggacagcagtgatgacagcagcgat
gaggaggagaagaagaaagtgtcagctaaaacagtcaaaaccaccccagccaagactgtg
acccccaaagctgctgcagctgctaagaaggcagagtccagctctgagagcacagactcc
agctctgaagaagaagcagcaaagaagcctaccccagcgaaggctaccccagcgaaggct
accccagcgaaggctaccccagcgaaggctaccccagcagaagactctgactccagctct
gaggatgaagaagaggctaagaagccagaagtaataagggttaagtccacagctgtcaaa
gtaacggttacccctgccaaggaagactcttcctcagattccagctcagaggaggaagag
gaggagaagggttcgaagactgtgaaagtggcgccagctacagcaaccgtaactgtggca
gaggtgaaggagcggggggccaagactgtgactgtagcgggggccaaggctactgtgaag
gtggtggaagacggctcctcttcctcgagctcagaggatgacgaagaggggacagtgaaa
gcagcaccagctaaggcgactcctaccgtgacccgaggcaaggctgctgaatcctcctcg
gactccgactcgagctcagaagatgaggaagaggctaaaaaaccagcagccaaggtgact
ccagcgaagactgccccagctaagaaatcagactcttccagctctgactctgacagcagt
tctgaggacgagacaccagctaaacctgctgctcccaaggccccagccaaggctgctaca
gaaaacagctcggactccgactcttcttctgaagatgacgaacccccagctaagaaggct
accccagctgctgttcctaaatcagcctccaaaccagcaaccccggttcctaaatcagcc
tccaaaccagccaccccggttactaaatcagcctccaaaccagccaccccggttactaaa
ccagctgcagcggagagcagctcggactccgactcttcttctgaagatgacgaaccccca
gctaagaaggctacgccagcctctgttgctaaatcagcttccaaaccagcaaccccggtt
cctaaacctgcttccaaaccagcaaccccggttactaaagcagccgagagcagttcagac
tccgactctagctcagatgaggatgaggccatagctaagaaggctacctctaaaccagcc
accccagtggtgactaaatcggcctctaaaccagccaccccagtggtggctaaatcggcc
tccaaaccagccacaccagtggtgactaaatcagccccagccaaggcagcagccgagagc
agctccgattcagacagctcggattcggaggaccaggctgctgctacgaagaagaccacc
cccaagaccacccccaaacctgcagccaagagtcctgccgtcaagacaccggctaaagct
gcagagtcgtcatcgtccgaggagagtagctctgaggaagaggaggctagtaaaaagact
gtgaaacccgctaccgcccccgctaccgcccccgctaccgcccccaagaccaccgcagca
gccagacctaaagccaaggaggacagcagctcttcagatgactccagtgatgaagaggca
gcgcccaaaccagcagcagtgaaggctacaacaccagcctcggctaaaaaggcagccgaa
agcagctccgactcttccgacagttccgactcggaggtggagacagaggccgccaaggcg
acgcccgccaagcctgctctgaccaatggaaagccagctacacccaaagcaaccacctct
gcagtcaaggcaacgaaaccgaccaaggcggccgagtcttcctcttccgaggagagtagc
tctgaggaagaggccagtaaaaagactgtgaaacctgccgccacccccaagaccaccccc
aagaccaccccagcagccagacctaaaaccaaggaggccagcagctcatcagacgactct
tcttcgtctgaagaagaagaggcagcggagaaagcaccggcagcagtcaccactcccatc
gctaacggcattgtaaacggtaagagaaaaaggggtggaggagcctcggaggatgaggaa
gaattaacgacccctaaaaataacaaagcagcagcaacaacaccacagacgttccctaaa
gtctctaagaagatcaatgtgcctttccgtagaataagagaagaggaaattgatgtggat
aaccgactggctgacaactccttcgacgccaagcgcgggtcggatggagactggggccag
agggccaatgacgtgctccgcttcaccaaggggaagtccttccgtcacgagaagaccaag
aagaagaggggtagctactgtggaggagccatctcccagtccgtcaactccatcaagttc
gacagcgactga
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