Oncorhynchus nerka (sockeye salmon): 115106383
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Entry
115106383 CDS
T07952
Name
(RefSeq) myoferlin-like isoform X1
KO
K22125
myoferlin
Organism
one
Oncorhynchus nerka (sockeye salmon)
Brite
KEGG Orthology (KO) [BR:
one00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
one04131
]
115106383
Membrane trafficking [BR:
one04131
]
Endosome - Lysosome transport
Others
Ferlins
115106383
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
C2
dsrm_Ferlin
FerB
Ferlin_C
FerA
FerI
PI3K_C2
Pex24p
T4SS_pilin
Motif
Other DBs
NCBI-GeneID:
115106383
NCBI-ProteinID:
XP_029484916
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All DBs
Position
LG23:6266581..6291997
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AA seq
2067 aa
AA seq
DB search
MLRVVVESAKGLPKSKLGSTPDPIANIIFKDEKKKTKTIDSEVNPVWNEVLEFDLKGSVL
DSSSYIDVIVKDYETIGKDKFLGSAKISLKDLATGQVKSFPCKDLALVNEKGQATGATVS
LVIHYDPPANATPNPNDPQAGDAAGDSGRGEEGDEDIADAGQSPSAPGQPGNPNQRLVKK
NKKLNRPLANKPQDFQIRVRILEGRQLPGNNIKPVVKVNVCGQTHRTRIKRGNNPFFDEM
FFYNVNMLPSDLFDQYVSIRVYDSFSLRADSLMGEFKVDVGFIYDEPAHSVMRKWLLLND
PDESSSGARGYLKVSMFIVGAGDESLVEKRDINDDQDDIESNLLLPAGVTLRWVTLSLKV
FRAEDIPQMDDAFIQSLKGMFGVDGDKKNLVDPFVEAHFAGKRLCTQVIEKNANPEWNQM
LNLQVKFPSMCERIKLTVFDWDRLTRNDSIGTIYLNLAKIASSGGEVQDKHAGYGFSPSL
EGKTGESEVGFLPAFGPCYINLYGSPREFTGLPDPYEELNYGKGEGVAYRGRILVELSTK
LEGKADKTVEEIPSDDILVAQKYQRRRKYCLCVVFHSASMLQEPGEPIQFEVSIGNYGNK
LDTTCKPLASTTQYSCAVFDGNHYYYLPWANAKPVVVITSFWEDISHRLDAVNIILYIAE
HLQSNITAMKLAILAKVPENRLAEIWLRLVNQVIEDLSSLKVPELEGHSNLTSLDIQMKK
LRDSTLQTIMEGAKSMREEATEIKDTLGDIEGWLDKLKQLAEEPQNSMPDVIIWMLRGEK
RVAYSRIPAYQLLYSTYSEQACGQFCGRTRNVFMQYPMDKNKGLKVPVQIRVNMWLGLSA
DEKKFNNFSEGTFSVFAELYENQAYMLGKWGTTGLGLRYKCSDVTGKLKLKQENFIPPRG
WEWEGDWFIDPEKGLLTEADAGHTEFMDEVFQNETRYPGGEWKPATEPYTDVNGEKTHTP
EEIECPAGWSWGDEWTVDENRAVDEKGWEYGITIPPDDKPKSWVPAEKMYHVHRRRRVFR
PRKRTSAAGTTTEKRDPGDPEGWEFSSLIGWKFHRQERSADTIRRRRRRRKMAPAGRLGA
SAIFKLEGALGVDVDEKKNDEVDASKLFGANTPTVSCSFDSSHLYHLRVYVYQARNLIAM
DKDSFSDPYAHVSFLHMSKTTETIKATLNPTWDQTLIFQDVEIYGDPQNIAQYPPDVVLE
FYDKDQVGKDELLGRSVCVPLVKLNPGMDQTPKLLWSPIIQKDQRAGEVLVAAELILKDK
GNETDLPLAPPKRAENLYMVPQGIRPVVQLMAIEILAWGLRNMKPYQLATVASPSLVVEC
GGEMVQSAVIKNMKKCPNFPGSVLFLKVLLPKEEMYTPPIVLKVIDHRPFGRKPVVGQCT
IDTLEEFRCDPYVIQKSSMSSKMALMAAFPHDTRIDMEDRRPLLEAQFVYSMSAAVNKMA
TTTSRLHAEKEKETVDWWSKFYASIGDHEKCRPYLQKGYDTLKVYDKELENVPEFKQLTD
FCNTFKLQRGKNEDEEDDPSVVGEFKGSFKVYPLSDDPGVAPPPRQFRELPESVPQECLV
RIYVVRGIDLQPKDNNGQCDPYIKISLGKKSIEDRDNYLPNTTNPVFGRMFEMSCFLPQD
KDLKISVYDYDLLTRDEKVGETVIDLENRFLSRFGSYCGLPQTYCISGINQWRDHLKPSQ
ILQNLARLKGVPPPRLEDDGKALSFNGTQYTLAQFEANKEIHQHLGPADERISLHVLRTH
GLVPEHVETRTLFSSFQPQLSQGCLQMWVDVFPKNMGLPGPPFDIVPRKAKKYFLRAVVW
NTSDVILDETSITGERMSDIYVKGWMPGMEEDKQKTDVHYRSLDGDGNFNWRFVFGFEYL
PAEQLCLVSKKEHFWSLDKTEFRIPPKLIVQIWDNDKFSLDDYLGTVELDLRKLTPPAKV
SKTCNLSMMEEVMDARPPKSDLANSLFAQKSVRGWWPCVTEQDGKKVLGGKVEMTLEIVS
EKEVDEKPAGKGRDEPNMNPKLDFPKRPDTSFFWFTNPCKTMKFIVWRRFKWLFIGLILL
VLVLLFVGILLYSLPNYISMKIVKPFK
NT seq
6204 nt
NT seq
+upstream
nt +downstream
nt
atgttgcgggttgtggtagaatctgcgaaaggtctgcctaaaagtaaacttggaagtact
ccggatcccatagcaaatattatttttaaagatgaaaagaagaaaaccaaaactattgac
agtgaagtcaacccagtttggaatgaagtccttgagtttgatttgaagggttctgtgctt
gattcctcatcttacattgatgtgattgtgaaagactacgaaactattggaaaagataag
tttctcggctctgcaaaaatctcactgaaagaccttgcaactggtcaagtcaaatccttt
ccatgtaaagatctggctcttgtcaatgaaaagggacaggctactggggccacggtgagc
cttgttattcattatgatcctccagccaatgccactccaaatccaaatgacccacaggca
ggagatgctgcaggggattctggtagaggtgaagagggggatgaggacatcgctgatgca
ggacagagtccctctgctcctggtcagcctgggaaccctaaccaaagactggtcaagaaa
aacaagaaattgaaccgacccctggccaataaacctcaggactttcagatccgtgtcagg
atattagagggacgacagctccctgggaataacatcaaacctgttgtgaaggtgaatgtt
tgtggacagactcacagaacaaggatcaagcggggaaacaatcccttctttgatgagatg
ttcttttacaacgtcaacatgttaccatcggacctatttgatcaatatgtcagcattcgg
gtgtacgactccttctctctgagagctgacagtctcatgggggagttcaaggttgatgtt
ggcttcatctatgatgaaccagctcactctgtaatgaggaagtggctcctcctgaatgac
cctgatgaatccagttcgggcgccagaggataccttaaagtcagcatgttcatcgttggg
gcgggagacgaatcactggtagagaagagggacattaatgatgaccaggatgacatagag
agtaacctgctgctgccagcaggggttacactgcgatgggtcaccctgtctctcaaagtg
ttccgggccgaggacattccccagatggatgatgcctttatccagtcattgaaggggatg
tttggagtggatggggacaagaagaatctagtggatccttttgtcgaggctcacttcgct
ggcaaaaggctgtgcacccaagtcattgagaagaatgccaacccagaatggaaccaaatg
ctgaatcttcaggtcaagttcccctccatgtgtgaacgaatcaaactgaccgtctttgat
tgggatcgcctgacgaggaatgactcgattggcaccatatacttgaatctggccaaaata
gcatcctctggtggcgaagttcaagacaaacatgcgggatatgggttctcgccatcactt
gaagggaagactggggagtctgaggtgggtttcctgcccgcctttgggccttgctatatc
aacctgtatgggagtcccagagagttcactgggcttcctgacccctacgaagagctcaac
tatggcaaaggtgaaggggtggcctatcgaggaagaatcctggttgagctgtcaactaaa
ctggaaggcaaggctgacaagactgtagaagagatccctagtgatgacatcttggtggcc
cagaaataccagcgcaggaggaagtactgtttgtgtgtagtgttccatagtgccagcatg
cttcaggaacctggcgaaccaatccagtttgaggtcagcattggcaactatggcaacaag
ctggacactacctgtaaaccactggcctccactacccagtacagctgtgctgtgtttgat
ggtaaccactactattacctgccctgggctaatgccaaaccagtggttgtcattacatca
ttctgggaggacatcagtcaccgtttggatgcagtcaacatcattctgtacatagctgaa
catctgcaatctaacatcactgcgatgaagttggccatcttggctaaagtccccgaaaac
cgtctggctgagatctggctgaggctggtaaatcaggtgatcgaggacctcagcagtttg
aaagtgccagagctggagggccactcaaacctgacctccctggacatccagatgaagaag
ctacgtgacagcaccctgcagaccatcatggagggggccaagagcatgagagaggaggcg
actgagatcaaggataccctgggggacattgagggctggctggacaaactgaagcagctc
gctgaggagccccagaacagcatgcctgacgtgatcatctggatgctgaggggagagaag
agagtggcgtacagccgcatcccagcctaccagctgctctactccacctacagcgaacag
gcctgtggacagttctgtggcaggaccaggaatgtcttcatgcagtaccctatggataaa
aacaagggtctgaaggttccagtccagatcagagtcaacatgtggctgggcctgtctgca
gacgagaaaaagttcaacaatttctcagaagggacgttcagtgtgtttgctgaattgtat
gagaatcaggcctacatgctggggaagtggggaactaccggtctgggtttacgctacaaa
tgctctgatgtgactggcaagctgaagctgaaacaagagaacttcattcccccgcgaggc
tgggagtgggagggagactggttcatagacccagagaagggtctgttgacagaggcagat
gcgggacacactgagttcatggatgaagtcttccagaatgagactcgctaccccggggga
gagtggaagcctgccactgagccctacactgacgtgaatggggagaagacccacacacca
gaggaaatcgagtgtcctgcaggctggagctggggggatgagtggaccgtagatgaaaac
agggctgtggacgagaaaggctgggagtatggaatcactatccctccagatgacaaaccc
aagtcttgggtgccagcagagaagatgtaccacgtccaccgacggaggagagtattcagg
cccaggaagagaacatcagctgctggtacaaccactgagaagcgagacccaggagaccca
gaaggctgggagttctcctctctgattggctggaagttccacaggcaggagcgttccgcc
gacacgatccgacgcagacgccggaggaggaaaatggcccctgctggccgcctgggggca
tccgccatattcaaactggagggggcgctgggggttgatgtagatgagaaaaaaaatgat
gaggttgatgcctccaagctctttggtgccaatactcctactgtgtcctgttcgtttgac
agctcacacctctaccaccttcgcgtctacgtttaccaggccaggaaccttattgccatg
gacaaagacagcttctcggatccatatgcccatgtgtccttcctgcacatgagtaaaacc
acagagaccataaaagctaccctgaaccccacgtgggaccagaccctgatcttccaggat
gtggagatctacggggacccgcagaacatcgcccagtatccccctgacgtggtgctggag
ttctatgacaaggaccaggtggggaaagatgagctattgggccggagcgtgtgtgtcccc
ctggtgaaactgaaccccggcatggaccagacccccaaactgctgtggtcccccatcata
cagaaggaccagcgggctggagaggtgctggtggctgctgagctcatcctgaaggataag
ggtaacgagacggacctccctctggcccctcccaagagggcggagaatctgtacatggtg
cctcaggggatacggcctgtggtgcagctcatggctattgagattctggcctgggggttg
cgcaacatgaagccctaccagctggccactgtggcctcccctagccttgtggtagagtgt
ggaggggagatggtccagtctgctgtcatcaagaacatgaagaagtgccccaactttcct
ggatctgtcctcttccttaaagtgcttcttcccaaagaggagatgtacacacctcccatc
gtgctgaaggtgattgaccacaggccatttggcaggaagccagtggttggacagtgtacc
atagacactctggaggagtttcgctgtgacccctacgtcatccagaagtcatccatgtca
tccaaaatggctttgatggctgcttttcctcacgacaccagaattgacatggaagacagg
aggcctctgcttgaagctcagtttgtgtacagcatgtcagcagcagtcaacaaaatggcc
accactacttctcgtcttcatgcagagaaggagaaggagacagttgattggtggagtaaa
ttctacgcttccattggagatcatgagaagtgccgtccttaccttcagaaaggatatgac
actttgaaggtgtatgataaggaactggagaatgttcctgagttcaaacaactcaccgat
ttctgcaacaccttcaaactgcagagaggcaagaatgaagatgaggaggatgatccatcc
gtcgttggagaattcaagggctcttttaaggtgtaccctctatcagacgacccgggtgtg
gctcctcctcctcgccagttccgtgagctgcctgaaagcgtgcctcaggagtgcctggtc
aggatctatgtggtcagaggcatcgacctgcagcccaaggacaacaatggtcagtgtgat
ccctatataaagatttccctgggaaagaagtcaattgaggaccgagataactacttacca
aataccaccaaccctgtttttggaaggatgtttgagatgtcatgttttctgcctcaagac
aaagacctgaagatctcagtgtatgactatgatctgctgacccgcgatgagaaagtagga
gagacagtgattgacctggagaaccgcttcctgtcacgttttggctcctactgtggcctg
cctcagacatactgcatctctggaatcaaccaatggcgtgaccatctgaagccctctcag
atccttcagaacctggcccgcctcaaaggcgtccctccacccaggttagaagatgatggc
aaagcactctcattcaatgggactcagtacaccctggctcaatttgaggccaacaaagag
atccaccagcacttgggtcctgccgacgaacggatctctctgcacgtgctcagaacacat
ggactggtgcctgagcacgtggagacaaggacactgttcagcagcttccagccccaactt
tctcagggatgccttcaaatgtgggtggatgttttccccaaaaacatgggccttcccgga
cctcccttcgacattgtgccacgcaaggccaagaagtatttcctgcgagctgttgtttgg
aacacctctgatgtcattctggacgaaactagtattactggggagcgcatgagtgatatc
tacgtcaaaggctggatgccaggtatggaggaggacaagcagaagaccgacgtccactac
aggtctctggacggggacggtaacttcaactggaggttcgtctttggctttgaatacctg
cccgctgaacagctgtgtctggtctccaagaaggagcacttctggagtctagacaaaaca
gagttcaggataccccccaagttgattgttcaaatttgggataatgacaagttctcattg
gatgattacctgggcacggtagagctggatctccgtaaacttacccctccggccaaggtt
tcaaagacgtgcaacctgagtatgatggaggaggtgatggatgcacgaccacccaaatcc
gacctggccaattcgctgttcgctcagaagtctgtcagaggctggtggccatgtgtcact
gaacaggatgggaagaaagtccttggtgggaaggttgagatgactctggaaatcgtgtct
gagaaggaagtggacgaaaagcctgctgggaagggcagggatgaacccaacatgaaccca
aagcttgacttccctaagcgtccggacacgtccttcttctggttcacgaacccctgtaag
accatgaagttcattgtgtggcgcagattcaagtggcttttcattggactgatcctactg
gttctagtgctgctcttcgtcggaatcctgttgtactctttaccgaactacatttcaatg
aaaattgtgaagccattcaaatga
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