Oncorhynchus nerka (sockeye salmon): 115106520
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Entry
115106520 CDS
T07952
Symbol
itga3
Name
(RefSeq) integrin alpha-3
KO
K06482
integrin alpha 3
Organism
one
Oncorhynchus nerka (sockeye salmon)
Pathway
one04510
Focal adhesion
one04512
ECM-receptor interaction
one04810
Regulation of actin cytoskeleton
one04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
one00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
115106520 (itga3)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
115106520 (itga3)
09142 Cell motility
04820 Cytoskeleton in muscle cells
115106520 (itga3)
04810 Regulation of actin cytoskeleton
115106520 (itga3)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
one04147
]
115106520 (itga3)
04515 Cell adhesion molecules [BR:
one04515
]
115106520 (itga3)
04090 CD molecules [BR:
one04090
]
115106520 (itga3)
Exosome [BR:
one04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
115106520 (itga3)
Cell adhesion molecules [BR:
one04515
]
Integrins
Integrin alpha subunits
115106520 (itga3)
CD molecules [BR:
one04090
]
Proteins
115106520 (itga3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Integrin_A_Ig_3
Integrin_A_Ig_1
Integrin_A_Ig_2
FG-GAP
FG-GAP_3
Collectrin
FG-GAP_2
Fer4_22
PsbJ
Motif
Other DBs
NCBI-GeneID:
115106520
NCBI-ProteinID:
XP_029485187
LinkDB
All DBs
Position
LG23:11604545..11657148
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AA seq
1051 aa
AA seq
DB search
MAPSLYLHGALAVFCVTLTCNGFNIDSRFPVIKEGKTKGSFFGFAVALHKQTEGSTKYLL
LSGAPKEKALALRNVNETGAIYSCPVTTELNDCERMDLVSSTDSSEIVEGMWLGVTVASQ
RDLPGGRVLACGHRYVKVVRGGAEEQLRMVGKCYVRGNDLTFNPNDEWQDYSYEVCNPNF
DMELEGLCNMGISGGMTDTDVYIGSVGSYVWQGNVHVTWRDPDPGNAWDSSDKDFGQLNR
RYSYMGYSVNEDKKLLSQDYFTVVTGSPRDESKGSVMLAKKGSTALVTEFIIPGEQVGSY
FGNSLAVTDLNNDNWNDLIVGAPFYFDRQKEEGGAVYVFMNENGSFQKTPSMVLKGPTAS
GFGFAVAAIGDVNQDGFQDFAVGAPFHETGNVYIWMGSKKGISEEPSQVIEGKSVGSGGF
QTFGYSISGGMDMDENSYPDLLVGSLDDRIALLRARPVIHLSKNFTVLPEIVDPNLCPRG
NKSCVTVTVCFSYTLSNGNKDFKKNIMVKYTVEADMHRRSPRVLFLVNKLATYTGLLTMP
SPKTECQVLELRLEDPVRDKLEPVVFSLNVSLDEQKPKVRKALQNLDSYPVLSHKQKVTE
RKEINFQKECGSDNRCTSNLQLTAAFANELLKPYPSQGKRQLLQYSSNVKKVVLLVEITN
VPGPGKVAEDAHQAMLNISTPSTLRYSGVRSHDTGVECRAGETVMCELGNPLRSNEKVSL
QLIFETTGINLQTREIESQLLLSTLSEQNDLYPVSVVLLIETSIQTSFSIENPLVQTYFS
GEVMGESAMNTTSDVGSLVEYTFKVSVEGEPLGALGILAVEFEWPFEVTSGKWLLYLTEI
VTKGTTETHCVPPGDIVNLLNLTLSKNRSKRPKRAVEGEHPRIIEPQAVLTVLTPRKETY
LLDCSKWTARCVTFTCPLINMSTSAKIIVRSRVWNSTMLEDYKNALRIKVRGQATLKLVT
DNPTIKMENETREFIVDIDPVLGVETPYEVPLWIIIVAVVAGILLLGVISIILWKCGFFR
RASRREMYEAKGQKAEMKSQPSETERLTEDY
NT seq
3156 nt
NT seq
+upstream
nt +downstream
nt
atggccccaagtctatatctccacggggccttggctgtgttttgtgtgactctaacctgc
aatggatttaatatagactcacggtttccagttatcaaagaagggaaaaccaagggcagt
ttctttggatttgctgttgccttacacaaacagacggaagggtccacgaaataccttctc
ctgtcaggagcacccaaggagaaagccctggctctgaggaacgtcaatgagacgggcgcc
atctactcctgtcctgtcaccacagagcttaacgactgtgaaaggatggacttggtcagc
tccacggactcgtctgagatagtggaggggatgtggctgggagtgactgtggccagccag
agagacctgccagggggtcgagtgctggcttgtgggcatcgctacgtgaaggtggtgcgg
gggggcgcagaggagcagctgcggatggtggggaagtgctacgtcaggggcaatgacctg
accttcaaccccaacgacgagtggcaggactacagctacgaggtgtgcaaccccaacttc
gacatggagctggagggcttgtgcaacatgggcatctcggggggcatgaccgacacggac
gtctacatcggctctgtgggcagctacgtgtggcaaggcaacgttcatgtaacgtggaga
gaccctgatccaggaaacgcgtgggactcaagtgacaaagactttgggcaactgaacaga
cgatacagctacatgggttactctgtcaatgaggacaagaagctgctgagtcaagactac
ttcacggtagtgacggggtctcccagagatgaatccaagggctcagtgatgctggctaag
aagggcagcacagcgttggtgaccgagttcatcatcccaggagaacaagtgggctcgtac
tttgggaacagcctagctgtcaccgacctcaacaatgacaactggaatgacctgatcgta
ggtgccccattctactttgaccgtcagaaagaggagggaggagcggtgtacgtcttcatg
aatgagaacggctctttccagaagacacctagcatggtactgaagggtcctacggcatct
ggttttggattcgccgtggcagccattggcgacgtcaaccaagatggattccaagacttt
gcagtaggagccccattccatgagactgggaatgtctacatctggatgggaagcaagaag
ggcatctctgaggagcctagtcaggttattgaagggaagtcagtgggtagtggtgggttc
cagacctttggctattccatcagtggaggtatggacatggatgagaacagttaccctgac
ctcctggttggttctctggatgaccgcatcgctctgctcagggctcgtccagtgatccat
ctctctaagaacttcaccgtgctgccagagattgtggaccctaacctttgtccccgtgga
aacaaatcctgtgtgactgtgacagtgtgtttctcctacacactcagcaatggaaacaaa
gatttcaagaaaaacatcatggtgaagtacacagtggaagccgacatgcatcgccggagc
cctcgagttctcttcctggtcaataagcttgccacctacacaggcctccttaccatgcca
tctcccaagaccgagtgtcaggtgctggagctcagactagaggatcctgtgagggacaaa
ctggagccggtggttttctccctcaacgtgtccctggatgagcagaaacccaaagttaga
aaggccctgcagaacctggactcctaccctgtactgagccacaaacagaaagtgactgag
aggaaagagatcaacttccagaaggagtgtggctcagacaacaggtgcaccagtaacctg
cagctaacagctgcgtttgctaacgaattactgaagccttaccccagtcaggggaaacgc
caattgctgcagtacagcagtaatgtgaaaaaggtggtgctacttgtggagataactaac
gtgccaggccctgggaaggtagctgaggacgcccaccaggccatgctcaacatctccacc
ccctccacgctccgttactctggcgtgcgctcccatgatactggtgtagaatgccgtgca
ggagagactgttatgtgtgagctggggaatccactgaggagcaatgagaaggtctctctg
cagctcatctttgaaacaacagggatcaacctccagaccagggagattgagtctcagttg
ctgctgtccacgttgagtgagcagaatgacctgtacccggtgtctgtggttctgttgata
gagacctccatccagacctccttctccatagagaatcccctggtccagacctacttcagc
ggggaggtgatgggagaatcagctatgaacacgaccagtgacgtgggcagtcttgtggaa
tacaccttcaaggtgtcagtggagggagagcctctgggggcactggggatcctggccgta
gagtttgagtggcccttcgaggtgaccagtgggaagtggcttctctacctgactgagatc
gtcaccaaggggacaactgagacccactgtgtccctccaggggacatcgtcaatcttctc
aacctcacattgtccaagaacaggagcaaacgtcccaagcgagcggtggagggcgaacac
cctcgcatcatcgagccacaggctgtccttaccgtgctgactcctcgtaaagagacctac
ctcctggattgttcaaagtggacagcccgctgtgtgacgttcacctgtcccttgatcaac
atgtctacctctgccaagatcattgtgaggtcacgggtgtggaacagcactatgctagag
gactataaaaatgctttgaggattaaggttagaggtcaggccacactgaaacttgtgacg
gacaaccccaccatcaagatggaaaatgagaccagagagttcatagtggacattgaccca
gtccttggggtggaaacaccttacgaggttcccctgtggatcatcatcgttgccgtggta
gcaggaatcctgctgttaggagtcatcagcatcatactatggaagtgtggcttcttcagg
agggccagcaggagggagatgtacgaggccaaaggccagaaggctgagatgaagagccag
ccctcagagacggagaggctgactgaggactactga
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integrated database retrieval system
