Oncorhynchus nerka (sockeye salmon): 115106524
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Entry
115106524 CDS
T07952
Symbol
tut1
Name
(RefSeq) speckle targeted PIP5K1A-regulated poly(A) polymerase isoform X1
KO
K18709
speckle targeted PIP5K1A-regulated poly(A) polymerase [EC:
2.7.7.19
2.7.7.52
]
Organism
one
Oncorhynchus nerka (sockeye salmon)
Brite
KEGG Orthology (KO) [BR:
one00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
one03019
]
115106524 (tut1)
Enzymes [BR:
one01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.19 polynucleotide adenylyltransferase
115106524 (tut1)
2.7.7.52 RNA uridylyltransferase
115106524 (tut1)
Messenger RNA biogenesis [BR:
one03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Poly(A) addition factors
115106524 (tut1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MTPAP-like_central
PAP_assoc
RL
RRM_1
zf-met
zf-C2H2_jaz
TUTase
zf-C2H2_2
RRM_7
Nup35_RRM_2
Motif
Other DBs
NCBI-GeneID:
115106524
NCBI-ProteinID:
XP_029485197
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All DBs
Position
LG23:complement(11817847..11825335)
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AA seq
805 aa
AA seq
DB search
MEDLDKDIRSTARGFHCILCNVNVPNKASLDAHVKGRKHVKLSTVRATRKAQVENSVFVS
GIKPDTAQADLVDYFQRFGPVSEVIMDKDKGVYAIVEFSENDSLQATLSRLEHDMNGLKL
RVKPRENKEFKLIPKKRQDSKNLQQILERLTKELCQTASVNEQMQSVVERFQLGENEKKA
RELLVQLLQEVFTEFFPDSQILAFGSSVNTFDIHSCDLDLFLDLDNTKVFQARAKNSSEQ
AGEGPSDDTRSEDSILSDIDLSAASPAEVLELVAAILRKCVPGVHKVMPVSGARLPVVKF
IHKELNLQGDVTINNRLAVRNTRFLQLCSGLDSRLRPLVYTVRYWAKQKQLAGNPSGAGP
LLNNYALTLLVIFYLQKCDPPVLPTLDQLKDMACEEEECVIEGWNCTFPSQPIAVPPSKN
TQDLCALLSGFFSFYAQFDFASSVISIREGCSLPVTSFLSRDKVKGEGEAMEQERSSGPK
LGPLNVLDPFELHHNVAGNLTERSQRSFQRECQEAEKYCRSLQYMRKSTKGKVWGLVRLF
TPRDEGPHHHKGAEGAERELAISIPFKAASLPEVVRSQLHSAGDGFRLLWFQRVCSAVEG
VIQGVLKCSLTNTGMGDSTGADGMNTASPIGKSTNDHGENASRLASSDCSPQSKDTPGTK
RPLLSSESSGDSVSPQGKRPRLDSYIGSQPGSPHWTYIQRHRVWAGRRKVRRELLKGGMD
MDSRPEGSSVELETQVTKHIVDKEPEDKEPLEFQVQAQVVGGTESTKAVIKFRPSADGAG
LFQDFFHFLEMFLPKMADTLMGKTG
NT seq
2418 nt
NT seq
+upstream
nt +downstream
nt
atggaagatttggacaaagacatacgatccactgcgagaggttttcattgcatcctatgc
aatgtgaatgtacccaataaggccagtctagatgcccatgtgaaagggcgaaagcatgtg
aagctgagcacagtgcgggcgactcggaaggctcaggtggagaacagtgtgtttgtcagt
gggatcaaaccggatacagctcaagctgaccttgtagactacttccaaaggtttggacca
gtgtcagaagtcatcatggacaaagacaagggtgtgtacgctattgtggaattcagtgag
aatgacagtctgcaggccacgctgtcccggttagagcacgacatgaacggtctgaagctg
cgggtgaaacccagggagaacaaggagttcaaactgatccctaaaaagaggcaggattcc
aagaacctgcagcagatactggagcggctcaccaaagagctgtgccagactgcttcggtg
aatgaacagatgcagagtgtggtggagcgattccagttgggggagaatgagaaaaaggcc
agagagttactagtgcaactgctccaggaggtctttacagagttcttcccagatagtcag
atcctggccttcggttcctccgtcaacacatttgacatccactcctgtgacttggatctg
ttcctggacctggacaacaccaaggtgttccaagctcgggccaagaattcttctgaacag
gcaggggaaggcccatcagacgatacccgctctgaggactccatcctgtccgacatcgac
ctctccgctgcctcgccggctgaagtgctagagctggtggcggccatcttgagaaagtgc
gtccctggggtgcacaaggtcatgccggtcagtggcgctcgcctccctgtggttaagttc
atccacaaggagctcaacctccagggggacgtgaccatcaataatagactggcggtgagg
aacacccgtttcctgcagctgtgctcagggctggactccaggctgcgccctctggtctac
accgtccgctactgggctaaacagaagcagctggctggtaaccccagcggtgctggaccc
ttgctgaataactatgctctgacactgctggtgatcttctatctgcagaagtgtgaccct
cctgttctccccacgttggaccagctgaaggacatggcctgtgaggaggaagagtgtgtg
atcgaaggctggaactgcaccttccccagtcagcccattgctgtgccccccagcaagaac
acccaggatctgtgtgccctgctgtcaggcttcttctccttctatgcccaatttgacttt
gccagctctgtcatctccatcagggagggctgctctctcccggtcaccagctttcttagc
cgagacaaggtaaagggggaaggggaggccatggagcaggagaggtcctcaggccccaag
ctgggccccctcaatgtgctggaccccttcgagctgcaccacaatgttgcgggcaacctg
actgagcgcagccagaggagctttcaaagggagtgccaggaggcagagaagtactgccgc
agcctgcagtacatgcgcaagtccaccaaaggtaaggtgtggggcctggtgcgccttttc
accccccgggacgagggccctcaccaccacaagggggctgagggggcagagcgggaacta
gccatcagcatccccttcaaggcggcgtcgctccccgaggtggtccgcagccagctgcac
tctgccggggacggcttccgcttgctatggttccagagggtgtgctctgctgtggagggg
gtgattcagggagtccttaagtgcagcctaactaacactggcatgggggatagcactgga
gctgacggaatgaatactgcgtctccgattggcaaatcgacaaacgaccacggtgagaac
gccagccgccttgcctccagtgactgcagcccacagagcaaggacaccccaggaaccaag
agacccctgctgtcctctgagagcagcggtgactccgtgtccccgcagggcaagaggccc
aggttggacagttacattgggtcccagcccggttctccacactggacctacatccagagg
cacagggtgtgggcgggccggcggaaggtaaggagggagctgcttaaagggggaatggac
atggactccaggccagagggcagcagtgtggagctggagacccaggtgaccaagcacatt
gtggacaaggagccagaggacaaggagccactggagttccaggttcaggcccaggtggtg
ggcggcacagagagcaccaaggccgtgatcaagtttcgaccctccgccgatggtgccgga
ctgttccaggacttctttcacttcctggagatgttcctgcccaagatggccgacacactg
atggggaagactgggtag
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