Oncorhynchus nerka (sockeye salmon): 115106565
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Entry
115106565 CDS
T07952
Symbol
wdr24
Name
(RefSeq) GATOR complex protein WDR24
KO
K20408
SEA/GATOR complex protein SEA2/WDR24
Organism
one
Oncorhynchus nerka (sockeye salmon)
Pathway
one04150
mTOR signaling pathway
Brite
KEGG Orthology (KO) [BR:
one00001
]
09130 Environmental Information Processing
09132 Signal transduction
04150 mTOR signaling pathway
115106565 (wdr24)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
one04131
]
115106565 (wdr24)
Membrane trafficking [BR:
one04131
]
Autophagy
Other autophagy associated proteins
SEACAT/GATOR2 complex
115106565 (wdr24)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40_CDC20-Fz
WD40_Prp19
WD40
Beta-prop_TEP1_2nd
Beta-prop_EIPR1
Beta-prop_EML_2
Beta-prop_RIG_2nd
WD40_WDHD1_1st
WDR55
Beta-prop_EML
Beta-prop_CAF1B_HIR1
EIF3I
WD40_MABP1-WDR62_2nd
Beta-prop_WDR90_POC16_2nd
MIOS_WD40
WD40_RFWD3
Beta-prop_WDR19_1st
ANAPC4_WD40
Beta-prop_HPS5
zf-RING_16
Beta-prop_NUP159_NUP214
Motif
Other DBs
NCBI-GeneID:
115106565
NCBI-ProteinID:
XP_029485287
LinkDB
All DBs
Position
LG23:complement(12921669..12929793)
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AA seq
785 aa
AA seq
DB search
MEKMSRVTTALGGSPISGRTMFCHLDAPANAISVCRDATQVVVAGRNIFKIYGLEEEQFV
EKLNLRVGRKPSLNFSCADVMWHQMEENLLATAATNGAVVTWNLGKPSRNKQDQLFTEHK
RTVNKVCFHPTEVYMLLSGSQDGYMKCFDLRKKESVSTFSGQSESVRDVQFSMKDYFTFA
ASFENGNVQLWDIRRPDRYERMFTAHTGPVFCCDWHPDDRGWLATGGRDKMVKVWDMTTN
RAKEIYCVQTIASVARVKWRPERKWHLATCSMMVDHNIYVWDVRRPFIPFATFEEHKDVT
TGIVWRHQHDPYFLLSGSKDSTLYQHMFKDASRPVDRANPEGLCFGLFGDLAFAAKESLI
SGDSNRKPYPGGDRRYPIFFFKKPDLTEQFAHVSSALSVFESSLESRRMDWFVKTARLYL
LGGKPFAELCDHNAKVAKELNRPQVSTTWTMLRLMFSDPANLSTPGPNNISKLGNLPLMN
SFSMKEMGTESRLDRSKGESRQDNIHLEPGNSLINSNNDENEETEGSEGQAEYMFGDAEL
DDDDLYSMEHEIQAVEEQEYTLPQEAFPLRHEIMDNPSVPEHLQQDKADSPHASGNEAEV
MCLTPIESLSLIAISQPLFSPHLPSRFFCPVVREMLSHYAEQGDVQMAVSVLIVLGDRIR
KEIDDLTQEHWYMSYIDLLQRFELWNVSNEVIKLSTCSAITCLNQTSTTLHVNCSNCKRP
MSNRGWICDRCHQCASVCAVCHHVVKGLFVWCQGCSHGGHLEHVMNWLKSNSHCPAGCGH
LCEYT
NT seq
2358 nt
NT seq
+upstream
nt +downstream
nt
atggagaagatgtcgcgggtaaccacagccctgggcggcagtcccatcagcggacgcacc
atgttctgccacctggacgcgcccgccaacgccatcagtgtgtgccgcgatgccacacag
gtggtggtggccggccgcaatatcttcaagatctacggcctggaggaggagcagtttgtg
gagaagctcaacctgcgagtgggccgcaagccctcgctcaacttcagctgtgccgacgtc
atgtggcaccagatggaggagaacctgctggccacggctgccaccaacggggcggtagtc
acctggaacctgggcaagccgtcgcgcaacaagcaggaccagctgttcaccgagcacaag
cgcacggtcaacaaggtgtgcttccaccccaccgaagtctacatgctgctcagtggctcc
caggacggctacatgaagtgcttcgacctgcgcaagaaggagtccgttagcaccttctca
ggtcagtcggagagtgttagagatgttcagttcagcatgaaggattactttacttttgct
gcttcctttgagaacggtaatgtccagctgtgggacatccggaggcctgaccggtatgag
aggatgttcacagcccacaccggccctgtgttctgctgtgactggcaccccgatgacagg
ggttggctggccactggtggccgggacaagatggtgaaggtgtgggacatgaccaccaac
cgggccaaagagatctactgcgtccagaccattgcctcggtggcacgggtcaagtggcgt
cctgagaggaagtggcacctggccacctgctccatgatggtggaccacaacatctacgtg
tgggacgtccgacggcccttcatcccctttgccaccttcgaggagcacaaggacgtgacc
acgggcatcgtgtggcgccaccagcatgacccctacttcctgctgtcaggctccaaggac
agcacactctaccagcacatgttcaaggacgccagccggcccgtggacagggccaacccc
gaggggctgtgcttcggcctgtttggcgaccttgccttcgccgccaaggagagcctcatc
agtggcgactccaacaggaaaccctacccgggtggcgaccgccgctacccaatcttcttc
ttcaagaagcccgatctgacggagcagtttgcccatgtgtccagcgccctcagcgtgttc
gagtcgtctctggagagcaggcgcatggactggtttgtcaagacggcgcgcctctacctc
ctcggcggcaaacccttcgccgagctgtgcgaccacaatgccaaggtggccaaggagctc
aacagacctcaggtttctactacatggacgatgcttcggctcatgttctcagatccagcg
aacctctcgacacctggtccaaataatatcagcaaactgggcaaccttcctttaatgaac
agtttcagtatgaaggagatggggacggagagcaggctggaccgtagtaaaggagagagc
agacaggacaacattcacctggagcctgggaactcgctcatcaacagcaacaacgacgag
aatgaggagaccgaggggagtgagggacaggcggagtacatgtttggtgacgctgagctg
gatgacgatgacctctactctatggagcacgaaatccaggccgtggaagaacaggagtac
acgctcccccaggaggccttcccgctgcgccacgagatcatggacaacccgtcggtcccg
gagcacctgcagcaggacaaggccgactcgccgcacgccagcggcaacgaggcggaggtc
atgtgcctgacgcccatagagtccctctccctgatcgccatctcgcagccgctgttcagc
ccccacctcccttcccgctttttttgccccgtggtcagagagatgctgagccactacgcc
gagcagggcgacgtgcagatggcggtctcggtgctcatcgtcctgggagaccgcatccgc
aaggagatcgacgacctcactcaggagcactggtacatgtcctacattgacttgctgcag
cgtttcgagctgtggaacgtgtccaacgaggtcatcaagctgagcacttgcagcgccatc
acctgtctgaaccagacatccaccacgctgcacgtcaactgcagcaactgcaaacggccc
atgagcaacaggggctggatctgtgaccggtgccaccagtgtgccagtgtttgtgccgtg
tgccaccatgtggtgaaggggctgtttgtgtggtgccaaggctgcagtcatggcgggcac
ctggagcacgtgatgaactggttaaagagcaattctcactgcccggctggctgcggacac
ctgtgtgagtacacctga
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