Oncorhynchus nerka (sockeye salmon): 115106567
Help
Entry
115106567 CDS
T07952
Name
(RefSeq) rhomboid-related protein 1 isoform X1
KO
K02857
rhomboid-related protein 1/2/3 [EC:
3.4.21.105
]
Organism
one
Oncorhynchus nerka (sockeye salmon)
Brite
KEGG Orthology (KO) [BR:
one00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
one01002
]
115106567
Enzymes [BR:
one01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.21 Serine endopeptidases
3.4.21.105 rhomboid protease
115106567
Peptidases and inhibitors [BR:
one01002
]
Serine peptidases
Family S54: Rhomboid family
115106567
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rhomboid
EF-hand_7
EF-hand_1
DUF5580
DUF5580_M
EF-hand_11
Motif
Other DBs
NCBI-GeneID:
115106567
NCBI-ProteinID:
XP_029485289
EnsemblRapid:
ENSONEG00000019393
LinkDB
All DBs
Position
LG23:complement(12941106..12990795)
Genome browser
AA seq
372 aa
AA seq
DB search
MDRSSLFQLIQEQLDPDNTGFIAVENFTSLVEHHELQLDPSKLDMLFALVQSNEDGQVCY
QELIELMSSKRSSSFRRAIANGRRTLQREILLDETGLGVYKRFVRYVAYEILPCETDRRW
YFHQNSLCPPPVFMAIITIIQIVVFMCYGIMLNKWVLQTYQPDFMKSSLVYHPRHRLQVW
RFFSYMFMHVGLEQLGFNALLQLMIGVPLEMVHGILRISLLYMAGVVAGSLTVSITDMRA
PVVGGSGGVYALCSAHLANVVMNWAGMRCPYKLLRMILALVCMSSEVGRAVWLRFSPPLP
SSGPQPSFMAHLAGAVVGISMGLLILRSYEESLQKQCSWWVILFSFITFLLFAIFWNIFA
YELLGVQLPPAP
NT seq
1119 nt
NT seq
+upstream
nt +downstream
nt
atggatagaagctctctgtttcagctcatacaagagcagctggacccagacaacaccggt
ttcattgcagtggagaacttcaccagtctggtggagcaccatgagctgcagctggacccc
tccaaactggacatgctgtttgcactggtgcagagcaacgaggatggacaggtgtgctac
caggagctcatcgagctgatgagcagcaagcgttccagcagtttccgacgagccatcgcc
aatggccgccgcacactgcagcgggagatcctattggacgagacgggcctgggcgtgtac
aagcgctttgtgcgctacgtggcctatgagatcctgccctgcgagacagaccggcgctgg
tacttccaccagaacagcttgtgtccccctcctgtcttcatggccatcattaccatcatc
cagatcgttgtgttcatgtgctatggcatcatgctgaataagtgggtactgcagacatac
cagccagacttcatgaagagctccctggtgtaccaccccagacaccgcctccaggtgtgg
cgcttcttcagctacatgttcatgcacgttgggttggaacagctggggttcaacgctctt
ctccagctgatgatcggcgttcccttggagatggtccatggcatcctacgcatcagtctg
ctctacatggctggtgtagtggcaggttccctgactgtgtccatcacagacatgcgtgct
ccagtggtggggggctccgggggtgtctacgctctgtgctcggcgcatctggccaacgtc
gtcatgaactgggccggtatgcggtgtccatacaagctcctccgcatgattctggcactg
gtgtgcatgagttcggaggtgggccgtgctgtgtggctgcgcttctccccgcccttgccc
tcctcggggccccagcccagcttcatggcccacctggcgggggcggtggtgggcatcagc
atgggcctgctcatcctgcgcagctacgaggagagcctgcagaagcagtgctcctggtgg
gtcatcctcttctccttcatcaccttccttctcttcgccatcttctggaacatcttcgcc
tacgagctgctgggggtgcagcttccacccgctccctga
DBGET
integrated database retrieval system
