Oncorhynchus nerka (sockeye salmon): 115106574
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Entry
115106574 CDS
T07952
Symbol
nlrc3
Name
(RefSeq) NLR family CARD domain-containing protein 3 isoform X1
KO
K22614
NLR family CARD domain-containing protein 3
Organism
one
Oncorhynchus nerka (sockeye salmon)
Brite
KEGG Orthology (KO) [BR:
one00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04054 Pattern recognition receptors [BR:
one04054
]
115106574 (nlrc3)
Pattern recognition receptors [BR:
one04054
]
Cytoplasmic pattern recognition receptors
NOD-like receptors
115106574 (nlrc3)
BRITE hierarchy
SSDB
Ortholog
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Gene cluster
GFIT
Motif
Pfam:
LRR_6
NACHT
NLRC4_HD2
NOD2_WH
CARD
AAA_16
LRR_12
Motif
Other DBs
NCBI-GeneID:
115106574
NCBI-ProteinID:
XP_029485297
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Position
LG23:complement(13194496..13217413)
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AA seq
1135 aa
AA seq
DB search
MERNTHYNPILDRNKRIAWQEDCYVDLQSTPTSTSTKGEMEDVGWIQKHQGHLQRFITTP
LLEGALSHMRKLELLSQGEEAQVQAGGQLQERVGTLTSILASMDPQGSNALQAFLENSDS
QMYRIITMHDPMVQEHKEALLLQYPTPSDSLSPGPCSPEFSSSRILLLVDGLSDLQQKEH
DLMQVEATRGARIHHVRQLALAKLLEPLTRVSLPPRVSLTVGVAGIGKSTLVGHFVRLWS
RGEICTDLSFVLPFAFWELNTGEKLSAERLVKLAFPHMTDPSLVLSGTCRTLLIFDGLDE
FRCPLDFSETVPCTDPKKEVSVDDLVTNIIRGNLLPEAAVWVTSRPAVASLIPGGLVDRL
TEIPGFSPKEIRLFLSHNFPKGDTASQIWTHLESNKIFMVMSYMPCICWIVAVTFGYLLE
SGWQEGLPRTCTELYSHFCAMRAEAGEPRGREPIKMDQLNGNNRKLLGSLGRLAFYGLLK
HKYTFSEQDMRAYGVDLPSTQGGLGTGVLIREESPSCVAYRFTHLTVQEFLAATYYHICS
KRAIFDLFSESAMSWPKIGFQNHFRSALQRSQQAEDGHLDVFVRFLAGLLCPAAVRPLAG
LLAQGKDDGGQRVWAAGLLQDLLGSGGAVVSLRSVNVAYCLQELQHTEVLRSVEEDLRCG
GLGWKLTRTHCTALAYLLQVSPECSEETNLSACLDYSTVKSLLPQLLYCSHLRLENNNFK
DDVMELLGSLLSAKDCHLQKISLAENAISNKGAKALSRALLVNRTLITLDLRSNNIGSKG
AKFLAEALKMNQVLVSINFQNNLIEEEGARALAEVLLSNRKLVSLNVQKNCIGADGAKRI
AEALKTNRTLTELILSSNQLGDKGTAALAQALTVNHSLHSLHLQSNSISNKGMTALTKAL
RLNRGLICLNLRENSIGVEGAKDMARALQENSSLRHLDLTANLLHDEGVKAIAGAVKVNR
ALTTLRLQWNFIKCTATKSLAHALLTNSTMQLLDLQENAIGDEGVVALAGALKTNTSLCT
LCLQGVSAGRSGAISMAEALMVNKTLHTLDLRGNSIGMEGAKALANALKTNRTLKSLNLQ
ENSLGMDGAIFIATALKGNHQLTYINLQGNSIGESGAKVISDAIRTNSPDCVVEI
NT seq
3408 nt
NT seq
+upstream
nt +downstream
nt
atggaaagaaacacccattacaatcctattctggacagaaacaagcgtatcgcatggcaa
gaggactgctatgttgacctccagtctacccccacctcaacttccaccaagggagagatg
gaagatgtgggctggattcagaaacatcaggggcatctgcagcgcttcattaccactccc
ctcctggagggggcgctgtcccacatgaggaagctggaacttctgagccagggtgaggag
gcccaggtacaagctggggggcagctgcaggagcgggtgggcacccttacctccatcctg
gccagcatggacccccagggctccaacgctctccaggccttccttgagaactctgactcc
cagatgtacaggatcatcacgatgcacgatcccatggttcaggagcacaaggaggctctt
ctgttgcagtatcccacaccaagtgacagcctctcccctggcccctgtagcccagaattc
tcctcctccagaatcttgctcctggtcgacggcctatcggacctccagcagaaggagcat
gacctcatgcaggtggaggccacccgtggggcgcggatacaccacgtcagacagctggcc
ctggccaaactcctggagcccctcacacgggtcagcctgccccccagggtctcactcact
gtgggagtggccggcatcggcaagagcacccttgtgggacattttgtacgcctttggagc
agaggtgagatctgcacagacttgagttttgtcttgccctttgccttctgggagctgaac
actggggagaagctgtcggccgaaagactggtgaagctggccttccctcacatgacggac
cccagcctggtgctgagtggtacatgtcggacattgctgatcttcgacggtctggacgag
ttccgttgtcctctggacttctcggagactgtgccttgcacagaccccaagaaggaggtg
tcggtggacgacttggtcaccaacatcatccggggcaacctgctccccgaagcagcggtg
tgggtgacctccaggccggcggtggcctcgttgattcctgggggactagtggacaggttg
accgagatccccggattcagcccgaaggaaattcggctgttcctgagccacaacttccct
aagggagatactgccagtcagatatggactcacttggagtccaacaagatcttcatggtg
atgtcttacatgccttgcatttgctggatagtggcggttacctttgggtacctgttggag
agtggctggcaggagggccttcccaggacctgcactgagctctactcccacttctgtgct
atgcgagccgaagcaggtgagcccagaggcagagagcctatcaagatggaccagcttaac
gggaacaaccgcaagctgctgggaagtctgggccgactggccttctacggacttctgaag
cacaaatacaccttcagtgagcaggacatgagggcctatggagtagaccttccatccacc
cagggtggcctcggaactggagtactgatccgcgaggaatccccgagttgtgtggcctac
cgcttcacccacctgactgtgcaggagttcttagcagccacgtactaccacatctgctcc
aaacgtgccatctttgacctgttcagcgagagcgccatgtcctggcccaagatcggcttc
cagaaccacttcaggagcgccctgcagcgatcccagcaggcagaggatggtcacctggat
gtgtttgtgcgattcctggcggggttgctgtgtccagcggcagtgcggccgctggcaggc
ctgctggcccaggggaaggacgatgggggccaaagggtttgggcggctgggctgctgcag
gacctcctgggcagcggtggtgctgtggtgtcactacgctcagtgaacgtggcctactgc
ctgcaggagctgcagcacacagaggtgctacgcagcgtggaggaggacctgcgctgtggc
ggcctgggatggaagctgacacggacacactgcacagcgctggcctacctgctacaggtg
tctccagagtgcagcgaggagaccaacctgtcggcatgtctggactactccactgtcaaa
agcctgctgcctcagctgctctactgcagccatctcagattggaaaataacaattttaaa
gatgatgtcatggaactgctgggaagcttactgagtgcaaaggactgccaccttcagaag
ataagtctggcagagaacgctatcagcaacaaaggggccaaggccctgagtcgagcacta
ctggttaaccggacgctaattacacttgatctccgtagcaacaacattggatctaaagga
gccaagtttctagcagaagccctcaaaatgaatcaggtcctggtgtccatcaatttccaa
aataatctcattgaggaggagggcgctcgggccctggctgaggtgctgctgtccaaccgc
aaacttgtctcgctgaatgtacagaagaattgtattggagcagatggagccaagaggatt
gcagaagcgctaaagacaaaccggacacttacagaactgattctgagcagtaaccagctg
ggggacaaaggcactgcagccctggcccaggccctgaccgtcaaccacagcctccactcg
ctgcacctgcagagtaactccatcagtaacaaagggatgactgcgttaaccaaggctctg
cggttgaaccgtggactcatctgtctgaacctgcgcgagaactcaatcggggtggagggg
gcgaaggatatggccagggcactgcaggagaacagctctctccggcacctggatcttaca
gccaacctgctgcacgatgagggggtgaaagccatagctggagctgtgaaggtcaacaga
gcgcttactactttacgtctccagtggaatttcatcaagtgcacagccacgaaatccttg
gcccacgccctactcaccaactctaccatgcagctactagatctacaggaaaatgccatt
ggggatgaaggagtggtagctctggcaggagccctgaagaccaatacgtctctctgtaca
ttgtgtctccagggtgtatcagcaggcaggagtggagccatctcaatggccgaggctcta
atggtcaacaaaaccctgcacactctggacctacgagggaactccataggaatggaggga
gccaaggctttggctaatgcactgaagacaaacagaacactcaaatcattaaatctgcag
gagaactctctgggaatggatggagccatattcatcgccacagccctgaaaggaaaccac
cagctaacttatataaacttgcaggggaacagcatcggagagtcgggagcaaaggtaatc
tccgatgccatcagaaccaactctccagactgtgtggtggagatctga
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