Oncorhynchus nerka (sockeye salmon): 115106665
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Entry
115106665 CDS
T07952
Name
(RefSeq) interferon a3-like isoform X1
KO
K05414
interferon alpha
Organism
one
Oncorhynchus nerka (sockeye salmon)
Pathway
one04060
Cytokine-cytokine receptor interaction
one04217
Necroptosis
one04620
Toll-like receptor signaling pathway
one04621
NOD-like receptor signaling pathway
one04622
RIG-I-like receptor signaling pathway
one04623
Cytosolic DNA-sensing pathway
one05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
one00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04060 Cytokine-cytokine receptor interaction
115106665
09140 Cellular Processes
09143 Cell growth and death
04217 Necroptosis
115106665
09150 Organismal Systems
09151 Immune system
04620 Toll-like receptor signaling pathway
115106665
04621 NOD-like receptor signaling pathway
115106665
04622 RIG-I-like receptor signaling pathway
115106665
04623 Cytosolic DNA-sensing pathway
115106665
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
115106665
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04052 Cytokines and neuropeptides [BR:
one04052
]
115106665
Cytokines and neuropeptides [BR:
one04052
]
Cytokines
Interferons
115106665
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Gene cluster
GFIT
Motif
Pfam:
Interferon
DUF2262
Motif
Other DBs
NCBI-GeneID:
115106665
NCBI-ProteinID:
XP_029485467
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Position
LG23:16914220..16931226
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AA seq
178 aa
AA seq
DB search
MHRPTKSLLICLLLTLCNGFSVGCRWMDDHKFLQHSETLMNVLNIMGGEFTTDSVDIPFP
EDLYEQAEYLPTDDTIWFILQTLDKIAELFDGKLDSVWDEKKVEIFLNVLTSQSDGLQSC
VRAQKKNSKNLQMYFKRLNNHVLKRMAYSAHAWELVRKEVRTHLRRLVLLGSATENSI
NT seq
537 nt
NT seq
+upstream
nt +downstream
nt
atgcataggcctacgaagtctttgcttatttgtttgttgctaaccctgtgcaatggtttc
tcggtgggctgcagatggatggacgatcacaaattcctacaacacagtgagaccttaatg
aacgtactcaatattatgggtggggagtttactacagacagtgtggacatacctttccca
gaggacctgtacgagcaagctgaatatttaccaactgatgacacaatttggttcatcctc
caaacccttgacaagatcgctgagctgtttgatggaaaactagactctgtctgggacgag
aagaaagtggagatcttcctcaatgttctcaccagtcagtctgatggccttcagtcatgt
gttagggcccagaaaaaaaatagcaagaatctgcaaatgtacttcaagaggctgaacaac
cacgtccttaaaagaatggcatacagtgctcatgcatgggagctggtcaggaaagaggtt
aggacacatctgaggaggctggttcttctgggttcagctacagaaaacagcatctaa
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