Oncorhynchus nerka (sockeye salmon): 115106692
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Entry
115106692 CDS
T07952
Name
(RefSeq) nucleolar transcription factor 1-like
KO
K09273
upstream-binding transcription factor
Organism
one
Oncorhynchus nerka (sockeye salmon)
Brite
KEGG Orthology (KO) [BR:
one00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
one03000
]
115106692
03021 Transcription machinery [BR:
one03021
]
115106692
Transcription factors [BR:
one03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
UBF
115106692
Transcription machinery [BR:
one03021
]
Eukaryotic type
RNA polymerase I system
Other transcription-related factors
UBF
115106692
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HMG_box
HMG_box_2
HMG_box_5
HMG_WDHD1
Motif
Other DBs
NCBI-GeneID:
115106692
NCBI-ProteinID:
XP_029485537
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All DBs
Position
LG23:complement(18412524..18429751)
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AA seq
548 aa
AA seq
DB search
MDFTEEDEMETSDKEQAWGRKDLITLLHGIKENIPKGDMSVFTKGERTLEWEKVAFGPYS
PQMCHQKWKELSKKIRKVRSLAELVTEAEVAFENPFQCQNWKIHPDFPRRPTPSNGIFSK
ENFKKFKKQQPEMTPTELFKLMSEKYNELPEHKKAKYIAKFQKEKEMYEKRMRKLRKEYS
GGKKVQRDCLKNIKGPLTPHGLWYRHERREFLLANPGAKRDCIRQSIVQKTRWSKLPDEE
KLKWINRSLEQQTQYEEEEMEEHPENKGSRKAKHKPLLRKSERLLKDLADGKPDKPPSKA
YNLFCREQKATIQGEGHSNTQYLVICSQRWKEMTKSKKEDYQRRCDKLKKEYEVNLNQFL
CTVTDKERILLENRKSMQTSTMAAQKVTKNKFQGEPKKPPERGNTVFYSEKMAELRAKSS
RLSSRKCMAMVSPLWKKLAQKEKEHYQRIAQERAREYQVELRSWFNTLSIKEQAKYLDQN
PNKLKILDNTEQRWMAKKGRTSDSEDDDIDTSSDEDDSDEDAEHMMEKENWSGCSSISSS
SEEDSDTE
NT seq
1647 nt
NT seq
+upstream
nt +downstream
nt
atggactttacagaggaagacgaaatggagacaagtgataaagaacaagcctggggtagg
aaggacctgataacgctcctgcatggtatcaaagaaaacattcccaaaggtgacatgagt
gttttcactaaaggggagaggacactggagtgggaaaaggtggcttttggtccctactct
ccacagatgtgtcatcagaagtggaaggaactatcaaaaaagatacgcaaggttcgttct
ctagcagagctggtcactgaagctgaggttgcctttgaaaaccctttccagtgccagaac
tggaagatacaccctgacttcccaaggagacctaccccgtcaaacggcatcttctccaaa
gagaactttaaaaagtttaagaagcagcagcctgaaatgacacctactgaactctttaag
ttaatgagtgagaagtataatgagctcccagagcacaagaaggcaaaatatattgcgaag
ttccagaaagagaaggaaatgtatgagaaacgcatgaggaagttgaggaaagagtactct
ggggggaagaaggtacagagagactgtttaaagaacataaaagggcccctcacaccccac
gggctctggtaccgccacgagaggagggaattccttctagccaacccaggtgccaaaaga
gactgtatcaggcagagtattgtgcagaagacgcgctggtccaagctacctgacgaggag
aaactcaagtggatcaatcgctctctggagcagcagacacagtatgaggaggaggagatg
gaggagcacccagagaataaagggagtcggaaggccaagcataagccacttctacgcaag
agtgagagactgttgaaggacttggcagacggcaaacctgacaaacccccatcgaaggct
tacaaccttttctgtagggaacagaaagccaccatacagggagagggacactctaacacc
cagtatttggtgatttgctcccagcgctggaaagaaatgacaaagagtaaaaaggaagac
taccagagacgctgtgacaagttaaagaaagaatacgaggtcaacctgaaccaatttttg
tgtactgtgacagataaggagcgcattctattggagaacaggaaaagcatgcagacctca
acgatggctgcacaaaaagtgacgaaaaataagtttcaaggcgagcctaagaaaccacct
gagcggggtaacacagtattttacagcgagaagatggcggagctgagagccaagtcgagc
cgcctcagctccaggaagtgcatggccatggtcagcccactgtggaagaagctggcccag
aaggaaaaggagcactaccagagaatagcccaggagagggctagggagtaccaagtagag
ctgcgcagctggtttaataccttgtccataaaggaacaggcaaagtacttggatcaaaac
ccaaataaattgaaaatcctcgacaacacagagcagagatggatggcaaagaagggcaga
acatcagactcggaggatgacgacatcgacacatccagtgatgaagatgactctgatgag
gatgccgaacatatgatggaaaaggagaattggtcagggtgctccagtattagctccagt
tctgaagaggactccgatacagaatga
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