Oncorhynchus nerka (sockeye salmon): 115106694
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Entry
115106694 CDS
T07952
Name
(RefSeq) tumor necrosis factor receptor superfamily member 16-like
KO
K02583
tumor necrosis factor receptor superfamily member 16
Organism
one
Oncorhynchus nerka (sockeye salmon)
Pathway
one03265
Virion - Ebolavirus, Lyssavirus and Morbillivirus
one04010
MAPK signaling pathway
one04060
Cytokine-cytokine receptor interaction
Brite
KEGG Orthology (KO) [BR:
one00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03265 Virion - Ebolavirus, Lyssavirus and Morbillivirus
115106694
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
115106694
09133 Signaling molecules and interaction
04060 Cytokine-cytokine receptor interaction
115106694
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04050 Cytokine receptors [BR:
one04050
]
115106694
04090 CD molecules [BR:
one04090
]
115106694
Cytokine receptors [BR:
one04050
]
Tumor necrosis factor receptors
TNF receptor superfamily
115106694
CD molecules [BR:
one04090
]
Proteins
115106694
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TNFR_c6
TNFR_16_TM
Death
TM_ErbB1
bDLD3
SLC52_ribofla_tr
Motif
Other DBs
NCBI-GeneID:
115106694
NCBI-ProteinID:
XP_029485540
LinkDB
All DBs
Position
LG23:18509703..18575664
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AA seq
430 aa
AA seq
DB search
MRTLFLTVLLGAVGALANKEACSSGKFTTTGECCKQCQPGEGVIKPCRATQTVCAPCLDS
ETFAENLSHTETCQPCTRCVGLLRMQTPCTDSNDAICVCDYGYYLNELSSQCQSCTKCPE
GQGMLYSCEHDRDTVCEECTRDTFSDQESSREPCLPCTICDEDDELEIQACNSISDTVCQ
DLNPPLFSSISPPPSGGSSLPSFTDDDALFPYGPTETATTTTTTSTIKFIGDELNKNLIP
IYCSILAAVVVGLVAFIIFKRWNSCKQNKQGANNCTANQNQTPSPEGEKLHSDSGISVDS
QSLQEQQGQGQTQAQTVVTVDEEPCLLLPLHTREEVEKLLYRGGEGEGYDHTEDRDWCSL
AGLLGYQEERIATFRQQEHPVRALLSDWASQDCASLDTLCTALCKINREDIAQSLVLSPN
TVKPTATSAV
NT seq
1293 nt
NT seq
+upstream
nt +downstream
nt
atgcgtactctgttcttaacagttctactcggagcggtcggagctctagccaataaggag
gcctgtagctcaggtaaattcaccaccactggggagtgctgcaagcagtgccagcccggg
gagggagtcatcaagccatgtcgagcaacacagactgtctgtgccccatgcctcgacagt
gagacgtttgcggagaacttaagccacaccgagacgtgccagccgtgcacccgctgcgtg
ggcctcctccgcatgcagacgccctgcaccgactccaacgatgccatctgtgtttgcgac
tacggctactacctgaacgagctctccagccagtgtcagagctgcaccaagtgccctgag
ggccagggcatgctgtacagctgtgaacacgaccgcgacaccgtgtgcgaggagtgcacc
agagatacgttctctgaccaagagagttcgcgggagccctgcctgccctgcaccatctgc
gacgaggacgacgagctggagatccaggcctgcaactccatcagtgacaccgtttgccaa
gatctgaacccgccgctcttctcctccatctcgccccctccctctgggggctcgtccctg
ccctcgttcactgacgatgacgccctcttcccctacggccccacggagaccgccaccacc
accaccactaccagtacaatcaagttcataggcgacgagctgaacaagaacctcatcccc
atttactgctccatcttggcagccgttgtggtgggcctcgtagccttcatcatctttaag
aggtggaacagctgtaagcagaacaagcagggcgccaacaactgcacagcaaatcagaac
cagactccttcgccggagggggagaagctgcacagcgacagtggcatatcggtggatagc
caaagcctacaggagcagcaaggccaggggcagactcaggcacagacagtggtcactgtg
gatgaggagccttgtctgctccttcccctccacacgcgagaggaggttgagaaactcctc
tacaggggcggagaaggggagggctacgaccacacggaggacagagattggtgcagcctg
gcagggctgctgggataccaggaagagcgcatcgccacattccggcagcaggaacatcca
gtccgtgcactgctctctgattgggcgagccaggattgcgccagcctggacacgctctgc
acggcgctgtgcaagatcaaccgcgaagacatcgcacagagcctcgtgctcagccccaac
accgtcaaacccactgccacatctgcagtgtga
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